prot_H-elongata_contig917.16628.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig917.16628.1
Unique Nameprot_H-elongata_contig917.16628.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length125
Homology
BLAST of mRNA_H-elongata_contig917.16628.1 vs. uniprot
Match: D7FXR8_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR8_ECTSI)

HSP 1 Score: 176 bits (446), Expect = 2.750e-50
Identity = 82/123 (66.67%), Postives = 96/123 (78.05%), Query Frame = 0
Query:    2 CNGNVVKGNIISTNGNECVEIKEGSTGNFVEENICSNQLDKNSGCYGVRGDDNTIRNNIATSCKGAGVRLGGWDVDGYAHGQGNHVYGNDFFDCSEGSIKVETEGQGDICGNTCEDGSCELIG 124
            CN N+V GN IST+GNECV+IKEG++GN +E+NICS QLD  SGCY  RGD NT R N+ T C GAGVRLGGW+VDG+ +G GN VYGNDF    EG++KV    QGDICGNTCEDGSC L+G
Sbjct:  224 CNDNLVSGNRISTSGNECVDIKEGASGNVIEDNICSEQLDAESGCYDSRGDGNTFRYNVGTDCMGAGVRLGGWEVDGHQYGVGNSVYGNDFNAVGEGALKVLVGEQGDICGNTCEDGSCSLVG 346          
BLAST of mRNA_H-elongata_contig917.16628.1 vs. uniprot
Match: D7FXR9_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR9_ECTSI)

HSP 1 Score: 171 bits (434), Expect = 5.590e-50
Identity = 79/123 (64.23%), Postives = 95/123 (77.24%), Query Frame = 0
Query:    2 CNGNVVKGNIISTNGNECVEIKEGSTGNFVEENICSNQLDKNSGCYGVRGDDNTIRNNIATSCKGAGVRLGGWDVDGYAHGQGNHVYGNDFFDCSEGSIKVETEGQGDICGNTCEDGSCELIG 124
            CNGNVV  N+IST+GNECV+IKEGS+GN +E+N CS+QLD  SGCY  RGD NT R N+ + C GAGVRLGGW+VDG+ +G  N VYGNDF+    G++KV    QGDICGNTCE+GSC L G
Sbjct:  224 CNGNVVSRNLISTSGNECVDIKEGSSGNVIEDNFCSDQLDAESGCYDSRGDGNTFRYNVGSECTGAGVRLGGWEVDGHQYGVNNSVYGNDFYAVGVGALKVLVGEQGDICGNTCEEGSCSLTG 346          
BLAST of mRNA_H-elongata_contig917.16628.1 vs. uniprot
Match: D7FZD2_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZD2_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 4.280e-45
Identity = 72/124 (58.06%), Postives = 92/124 (74.19%), Query Frame = 0
Query:    1 ICNGNVVKGNIISTNGNECVEIKEGSTGNFVEENICSNQLDKNSGCYGVRGDDNTIRNNIATSCKGAGVRLGGWDVDGYAHGQGNHVYGNDFFDCSEGSIKVETEGQGDICGNTCEDGSCELIG 124
            +C  N+V GN+I T+ NECV++KEG+ GN +E+N+C NQLD NSGCY  RG+DN  RNN  + C GAGVRLGGW+VDG+ +G GN VY NDF D   G++K+  +GQG ICGNTC    C+LIG
Sbjct:  185 VCTNNLVAGNVIDTSANECVDVKEGAYGNVIEDNMCYNQLDINSGCYNSRGNDNIFRNNAGSDCLGAGVRLGGWEVDGFQYGVGNSVYDNDFNDVGFGALKIMVDGQGTICGNTCAGDDCQLIG 308          
BLAST of mRNA_H-elongata_contig917.16628.1 vs. uniprot
Match: A0A6H5KT05_9PHAE (Beta_helix domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KT05_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 1.620e-38
Identity = 64/118 (54.24%), Postives = 81/118 (68.64%), Query Frame = 0
Query:    2 CNGNVVKGNIISTNGNECVEIKEGSTGNFVEENICSNQLDKNSGCYGVRGDDNTIRNNIATSCKGAGVRLGGWDVDGYAHGQGNHVYGNDFFDCSEGSIKVETEGQGDICGNTCEDGS 119
            CN N + GN I+ NGNECV+IKEGSTG  VEEN CS QLD++SGC+G RGD N  R N A+ C G GVR+GGW+VDG+ +GQ N +Y N F     G +      QG +CGN+C+ G+
Sbjct:  197 CNDNTITGNTITPNGNECVDIKEGSTGTIVEENTCSGQLDEDSGCFGSRGDGNVFRYNTASDCLGVGVRIGGWEVDGHKYGQDNSIYENSFTRAESGGLSFFALPQGKVCGNSCQGGA 314          
BLAST of mRNA_H-elongata_contig917.16628.1 vs. uniprot
Match: A0A6H5KRG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRG5_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 3.690e-27
Identity = 57/114 (50.00%), Postives = 73/114 (64.04%), Query Frame = 0
Query:    1 ICNGNVVKGNIISTNGNECVEIKEGSTGNFVEENICSNQLDKNSGCYGVRGDDNTIRNNIATSCKGAGVRLGGWDVDGYAHGQGNHVYGNDFFDCSEGSIKVETEGQGDICGNT 114
            +C  N +  N   T GNECV+IKEGS  N VE N+C  Q+D NSGC+G RG DNT R N    CKGAG+R+GG   DGY  G+GNH+YGN   +  +G+  V +  QG +C N+
Sbjct:  174 VCGYNWIHHNTFRTYGNECVDIKEGSANNLVEHNVCEQQVDPNSGCFGSRGSDNTFRWNEIAECKGAGIRVGG--EDGY--GEGNHMYGNTIKNAEKGAFNVMSPNQGTVCENS 283          
BLAST of mRNA_H-elongata_contig917.16628.1 vs. uniprot
Match: UPI000379D4FF (DUF1565 domain-containing protein n=1 Tax=Hahella ganghwensis TaxID=286420 RepID=UPI000379D4FF)

HSP 1 Score: 108 bits (269), Expect = 1.390e-25
Identity = 54/108 (50.00%), Postives = 71/108 (65.74%), Query Frame = 0
Query:   10 NIISTNGNECVEIKEGSTGNFVEENICSNQLDKNSGCYGVRGDDNTIRNNIATSCKGAGVRLGGWDVDGYAHGQGNHVYGNDFFDCSEGSIKVETEGQGDICGNTCED 117
            N   TNGNECV+IK+GS  N VE NIC+ Q D NSG + V+GD N +RNNI+ +  GAG+R+GG  V+G  +G  N +YGN FFD    ++KV    Q ++CGN   D
Sbjct:  242 NSFLTNGNECVDIKDGSVYNLVEHNICTGQKDPNSGGFNVQGDYNVVRNNISFANNGAGIRVGGHMVNGNQYGVENDIYGNVFFDNGHAAVKVMASPQSNVCGNDSYD 349          
BLAST of mRNA_H-elongata_contig917.16628.1 vs. uniprot
Match: A0A261GV77_9GAMM (DUF1565 domain-containing protein n=1 Tax=Hahella sp. CCB-MM4 TaxID=1926491 RepID=A0A261GV77_9GAMM)

HSP 1 Score: 107 bits (268), Expect = 1.940e-25
Identity = 54/113 (47.79%), Postives = 73/113 (64.60%), Query Frame = 0
Query:    5 NVVKGNIISTNGNECVEIKEGSTGNFVEENICSNQLDKNSGCYGVRGDDNTIRNNIATSCKGAGVRLGGWDVDGYAHGQGNHVYGNDFFDCSEGSIKVETEGQGDICGNTCED 117
            N +  N   TNGNECV+IK+GS  N VE NIC+ Q D NSG + ++GD N +RNNI+ +  GAG+R+GG  V+GY +G  N VY N FFD    ++K+    Q ++CGN   D
Sbjct:  237 NWIHDNSFLTNGNECVDIKDGSEYNLVENNICTGQRDPNSGGFNIQGDRNILRNNISFANNGAGIRIGGHMVNGYQYGVENDVYSNVFFDNGNAAVKMMAYPQSNVCGNDSYD 349          
BLAST of mRNA_H-elongata_contig917.16628.1 vs. uniprot
Match: D7FZ38_ECTSI (Secreted protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ38_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 1.220e-24
Identity = 54/111 (48.65%), Postives = 68/111 (61.26%), Query Frame = 0
Query:    1 ICNGNVVKGNIISTNGNECVEIKEGSTGNFVEENICSNQLDKNSGCYGVRGDDNTIRNNIATSCKGAGVRLGGWDVDGYAHGQGNHVYGNDFFDCSEGSIKVETEGQGDIC 111
            +C  N +  N   T GNECV+IKEGS  N VE N+C  Q D NSGC G RG DNT R N    CKGAG+R+GG   DGY  G+GNH++G    +  +G+  V +  QG +C
Sbjct:   49 VCGYNWIHHNAFRTYGNECVDIKEGSANNLVENNVCEQQFDPNSGCVGSRGSDNTFRWNEIAECKGAGIRVGG--EDGY--GEGNHMHGKTIKNAEKGAFNVMSPNQGTVC 155          
BLAST of mRNA_H-elongata_contig917.16628.1 vs. uniprot
Match: S3HLY8_9HYPH (Beta_helix domain-containing protein n=4 Tax=Rhizobium grahamii TaxID=1120045 RepID=S3HLY8_9HYPH)

HSP 1 Score: 103 bits (257), Expect = 2.210e-24
Identity = 57/113 (50.44%), Postives = 70/113 (61.95%), Query Frame = 0
Query:    4 GNVVKGNIISTNGNECVEIKEGSTGNFVEENICSNQLDKNSGCYGVRGDDNTIRNNIATSCKGAGVRLGGWDVDGYAHGQGNHVYGNDFFDCSEGSIKVETEGQGDICGNTCE 116
            GN V  N+I TNGNECV+IKEGS+ N VE N CS Q DK+S  +  RG++N  R N  ++ KGAGVRLGG   D    G  N VYGN F     G +K +   QG +CGNT +
Sbjct:  162 GNHVHHNVIDTNGNECVDIKEGSSRNIVEHNRCSGQKDKHSAGFDSRGNNNVFRYNTVSNVKGAGVRLGG---DSETDGINNDVYGNTFRKVGVGVVKAQRGPQGKVCGNTLD 271          
BLAST of mRNA_H-elongata_contig917.16628.1 vs. uniprot
Match: B5LWC7_9PHYC (Putative nosD copper-binding protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWC7_9PHYC)

HSP 1 Score: 106 bits (265), Expect = 2.400e-24
Identity = 55/118 (46.61%), Postives = 71/118 (60.17%), Query Frame = 0
Query:    7 VKGNIISTNGNECVEIKEGSTGNFVEENICSNQLDKNSGCYGVRGDDNTIRNNIATSCKGAGVRLGGWDVDGYAHGQGNHVYGNDFFDCSEGSIKVETEGQGDICGNTCEDGSCELIG 124
            V  N I + GNECVE+KEG++   VE N+C++Q D NS   G R DD T R N  + C GAG+R+GG  +    +G+ N VYGN F D    S+KVET      C N+C DGSC + G
Sbjct:  213 VHDNTIDSQGNECVEVKEGASDVLVEYNVCTDQQDSNSAGMGSRTDDVTFRYNDISDCLGAGIRIGGHTIGDKTYGENNEVYGNVFHDTEYSSVKVETGKNHVFCENSCGDGSCTVRG 330          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig917.16628.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXR8_ECTSI2.750e-5066.67FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D7FXR9_ECTSI5.590e-5064.23FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D7FZD2_ECTSI4.280e-4558.06FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5KT05_9PHAE1.620e-3854.24Beta_helix domain-containing protein n=2 Tax=Ectoc... [more]
A0A6H5KRG5_9PHAE3.690e-2750.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI000379D4FF1.390e-2550.00DUF1565 domain-containing protein n=1 Tax=Hahella ... [more]
A0A261GV77_9GAMM1.940e-2547.79DUF1565 domain-containing protein n=1 Tax=Hahella ... [more]
D7FZ38_ECTSI1.220e-2448.65Secreted protein n=1 Tax=Ectocarpus siliculosus Ta... [more]
S3HLY8_9HYPH2.210e-2450.44Beta_helix domain-containing protein n=4 Tax=Rhizo... [more]
B5LWC7_9PHYC2.400e-2446.61Putative nosD copper-binding protein n=1 Tax=Feldm... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 51..73
e-value: 2.8
score: 16.9
coord: 2..24
e-value: 33.0
score: 13.4
coord: 82..104
e-value: 810.0
score: 7.9
IPR039448Right handed beta helix domainPFAMPF13229Beta_helixcoord: 3..108
e-value: 4.5E-7
score: 29.8
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 2..120
e-value: 2.4E-10
score: 41.7
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 2..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig917contigH-elongata_contig917:13027..14169 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig917.16628.1mRNA_H-elongata_contig917.16628.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig917 13027..14169 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig917.16628.1 ID=prot_H-elongata_contig917.16628.1|Name=mRNA_H-elongata_contig917.16628.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=125bp
ICNGNVVKGNIISTNGNECVEIKEGSTGNFVEENICSNQLDKNSGCYGVR
GDDNTIRNNIATSCKGAGVRLGGWDVDGYAHGQGNHVYGNDFFDCSEGSI
KVETEGQGDICGNTCEDGSCELIG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR039448Beta_helix
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence