prot_H-elongata_contig91646.16624.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig91646.16624.1
Unique Nameprot_H-elongata_contig91646.16624.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length85
Homology
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BLAST of mRNA_H-elongata_contig91646.16624.1 vs. uniprot
Match: D8LMY3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMY3_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 3.580e-26
Identity = 56/81 (69.14%), Postives = 70/81 (86.42%), Query Frame = 0 
Query:    1 MADRLSKLEGLAGKHDTLTATLLREHQEEMLVKLREIRDALANESGELESVKAANDEVARLREVIKRKDYRIVHLTRALDA 81
            M ++LSKLEGLAG +D    TLL++HQ+EML KLREIR A+A E+GEL+SVK AN EVA+LREVIKR+DYRI+HL+RAL+A
Sbjct:    8 MTEQLSKLEGLAGGNDG--HTLLQQHQKEMLAKLREIRAAMATETGELDSVKEANAEVAKLREVIKRRDYRILHLSRALEA 86
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig91646.16624.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LMY3_ECTSI3.580e-2669.14Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 24..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig91646contigH-elongata_contig91646:1114..2552 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig91646.16624.1mRNA_H-elongata_contig91646.16624.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig91646 1105..2552 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig91646.16624.1 ID=prot_H-elongata_contig91646.16624.1|Name=mRNA_H-elongata_contig91646.16624.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=85bp
MADRLSKLEGLAGKHDTLTATLLREHQEEMLVKLREIRDALANESGELES
VKAANDEVARLREVIKRKDYRIVHLTRALDAVNP*
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