prot_H-elongata_contig91612.16621.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig91612.16621.1
Unique Nameprot_H-elongata_contig91612.16621.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length41
Homology
BLAST of mRNA_H-elongata_contig91612.16621.1 vs. uniprot
Match: D8LSW5_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW5_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 2.100e-14
Identity = 38/40 (95.00%), Postives = 39/40 (97.50%), Query Frame = 0
Query:    1 IQVGQRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQ 40
            + VGQRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQ
Sbjct:  221 LSVGQRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQ 260          
BLAST of mRNA_H-elongata_contig91612.16621.1 vs. uniprot
Match: A0A6H5JDN6_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDN6_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 2.590e-14
Identity = 38/40 (95.00%), Postives = 39/40 (97.50%), Query Frame = 0
Query:    1 IQVGQRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQ 40
            + VGQRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQ
Sbjct: 1337 LSVGQRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQ 1376          
BLAST of mRNA_H-elongata_contig91612.16621.1 vs. uniprot
Match: D8LSW4_ECTSI (Multidrug resistance-associated protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW4_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 2.590e-14
Identity = 38/40 (95.00%), Postives = 39/40 (97.50%), Query Frame = 0
Query:    1 IQVGQRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQ 40
            + VGQRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQ
Sbjct: 1317 LSVGQRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQ 1356          
BLAST of mRNA_H-elongata_contig91612.16621.1 vs. uniprot
Match: D8LSW3_ECTSI (Multidrug resistance-associated protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW3_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 2.590e-14
Identity = 38/40 (95.00%), Postives = 39/40 (97.50%), Query Frame = 0
Query:    1 IQVGQRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQ 40
            + VGQRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQ
Sbjct: 1286 LSVGQRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQ 1325          
BLAST of mRNA_H-elongata_contig91612.16621.1 vs. uniprot
Match: A0A6H5JDL0_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL0_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 6.600e-14
Identity = 37/40 (92.50%), Postives = 39/40 (97.50%), Query Frame = 0
Query:    1 IQVGQRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQ 40
            + VGQRQLLCLARAVLQR+QILVMDEATANIDQHTDSLIQ
Sbjct: 1236 LSVGQRQLLCLARAVLQRTQILVMDEATANIDQHTDSLIQ 1275          
BLAST of mRNA_H-elongata_contig91612.16621.1 vs. uniprot
Match: N6UP16_DENPD (ABC transporter domain-containing protein (Fragment) n=2 Tax=Dendroctonus ponderosae TaxID=77166 RepID=N6UP16_DENPD)

HSP 1 Score: 62.8 bits (151), Expect = 3.480e-11
Identity = 28/37 (75.68%), Postives = 36/37 (97.30%), Query Frame = 0
Query:    4 GQRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQ 40
            GQRQL+CLARA+++ ++IL+MDEATAN+DQHTDSLIQ
Sbjct:   33 GQRQLICLARAIVRNNKILIMDEATANVDQHTDSLIQ 69          
BLAST of mRNA_H-elongata_contig91612.16621.1 vs. uniprot
Match: A0A2R4FX81_9CUCU (ABC transporter C (Fragment) n=1 Tax=Lissorhoptrus oryzophilus TaxID=308863 RepID=A0A2R4FX81_9CUCU)

HSP 1 Score: 64.7 bits (156), Expect = 4.650e-11
Identity = 30/39 (76.92%), Postives = 38/39 (97.44%), Query Frame = 0
Query:    3 VGQRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQV 41
            VGQRQL+CLARA+++R++ILVMDEATAN+D HTD+LIQV
Sbjct:  357 VGQRQLVCLARAIIRRNKILVMDEATANVDPHTDALIQV 395          
BLAST of mRNA_H-elongata_contig91612.16621.1 vs. uniprot
Match: A0A2H8TQ56_9HEMI (Multidrug resistance-associated protein 4 n=3 Tax=Melanaphis sacchari TaxID=742174 RepID=A0A2H8TQ56_9HEMI)

HSP 1 Score: 61.6 bits (148), Expect = 5.430e-11
Identity = 28/38 (73.68%), Postives = 36/38 (94.74%), Query Frame = 0
Query:    3 VGQRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQ 40
            VGQRQL+CLARA++Q ++ILV+DEATAN+D HTD+LIQ
Sbjct:   10 VGQRQLICLARAIIQSNKILVLDEATANVDPHTDALIQ 47          
BLAST of mRNA_H-elongata_contig91612.16621.1 vs. uniprot
Match: N6UIT0_DENPD (ABC transporter domain-containing protein (Fragment) n=1 Tax=Dendroctonus ponderosae TaxID=77166 RepID=N6UIT0_DENPD)

HSP 1 Score: 62.8 bits (151), Expect = 5.850e-11
Identity = 28/37 (75.68%), Postives = 37/37 (100.00%), Query Frame = 0
Query:    4 GQRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQ 40
            GQ+QL+CLARA++++++ILVMDEATAN+DQHTDSLIQ
Sbjct:   63 GQKQLICLARAIVRKNKILVMDEATANVDQHTDSLIQ 99          
BLAST of mRNA_H-elongata_contig91612.16621.1 vs. uniprot
Match: A0A6P6YL70_DERPT (multidrug resistance-associated protein 4-like n=1 Tax=Dermatophagoides pteronyssinus TaxID=6956 RepID=A0A6P6YL70_DERPT)

HSP 1 Score: 64.3 bits (155), Expect = 6.360e-11
Identity = 30/40 (75.00%), Postives = 38/40 (95.00%), Query Frame = 0
Query:    1 IQVGQRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQ 40
            + VGQRQL+CLARA+L+R++ILV+DEATAN+D HTDSLIQ
Sbjct: 1189 LSVGQRQLICLARALLRRNKILVLDEATANVDHHTDSLIQ 1228          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig91612.16621.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSW5_ECTSI2.100e-1495.00ABC transporter domain-containing protein n=1 Tax=... [more]
A0A6H5JDN6_9PHAE2.590e-1495.00ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D8LSW4_ECTSI2.590e-1495.00Multidrug resistance-associated protein-like prote... [more]
D8LSW3_ECTSI2.590e-1495.00Multidrug resistance-associated protein-like prote... [more]
A0A6H5JDL0_9PHAE6.600e-1492.50ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
N6UP16_DENPD3.480e-1175.68ABC transporter domain-containing protein (Fragmen... [more]
A0A2R4FX81_9CUCU4.650e-1176.92ABC transporter C (Fragment) n=1 Tax=Lissorhoptrus... [more]
A0A2H8TQ56_9HEMI5.430e-1173.68Multidrug resistance-associated protein 4 n=3 Tax=... [more]
N6UIT0_DENPD5.850e-1175.68ABC transporter domain-containing protein (Fragmen... [more]
A0A6P6YL70_DERPT6.360e-1175.00multidrug resistance-associated protein 4-like n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..41
e-value: 1.3E-11
score: 46.5
NoneNo IPR availablePANTHERPTHR24223:SF262coord: 3..40
NoneNo IPR availablePANTHERPTHR24223FAMILY NOT NAMEDcoord: 3..40
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 4..29
e-value: 1.8E-6
score: 28.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 3..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig91612contigH-elongata_contig91612:2144..2266 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig91612.16621.1mRNA_H-elongata_contig91612.16621.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig91612 2144..2266 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig91612.16621.1 ID=prot_H-elongata_contig91612.16621.1|Name=mRNA_H-elongata_contig91612.16621.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=41bp
IQVGQRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003439ABC_transporter-like
IPR027417P-loop_NTPase