prot_H-elongata_contig12169.1656.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12169.1656.1
Unique Nameprot_H-elongata_contig12169.1656.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length573
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12169.1656.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 440..482
e-value: 1.9E-4
score: 21.6
coord: 396..439
e-value: 2.0E-6
score: 27.9
coord: 484..530
e-value: 2.2E-6
score: 27.7
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 156..529
e-value: 8.1E-7
score: 29.7
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 359..537
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 359..537
coord: 305..458
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 151..275
coord: 452..571
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 151..275
coord: 452..571
coord: 305..458
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 169..506

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12169contigH-elongata_contig12169:5167..7133 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12169.1656.1mRNA_H-elongata_contig12169.1656.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12169 5077..8664 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12169.1656.1 ID=prot_H-elongata_contig12169.1656.1|Name=mRNA_H-elongata_contig12169.1656.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=573bp
MVLESPVDMALCQNMLNASGRLVAQPSAAEANSGPGLAALGVLVREISGN
DKRWLRSTKELRLVSLQLCNACRRTLYFRVWVERGTPCSLWTTTEIAEAD
PRSSRGVGRGIWPRLRRFPRLSGVRAAEVVWDLPVGDLSAARNFLEGAVR
LQFGFRFDDPLQGCSPLLPDTLLVLDLGPRFQHDVLGVSWPAKLRELNFG
ASFNGSILGIALPSGLRRLTFGASFNKPVAGVAWPASLLILEFGQKFDQP
VAIEGVSWPERLESLSFGRDFSHDLGVVSETNTGESTIGTTVVTGPACRG
QLWWPASLRRLVLSEGFWQPIDTVVWPLALEELHLDCVSVRRDTGVVTLG
AASTTRSSIVWPSGLKRLTLDFTFHQPVEDVPLPPALEELTFGNKFNQSI
GGVLWPQGLKQISFGASFNQNIDGVIFPPRVERLTFGYCFDQSLERVWWP
PALQRLVFRDHFDQSIDDVAWPASLKVLQFGCRFNQPLSGGPSSSWPPPR
LQRLILGKKFDQPAEHVVLPPTLVFLEFGEGCRQRLRKIEWPRGLREIVV
RKERTILSHQGLDGLPKGCKIR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP
IPR032675LRR_dom_sf