mRNA_H-elongata_contig90331.16518.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig90331.16518.1 vs. uniprot
Match: D8LNM0_ECTSI (Protein atp11, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNM0_ECTSI) HSP 1 Score: 279 bits (714), Expect = 1.720e-93 Identity = 130/162 (80.25%), Postives = 144/162 (88.89%), Query Frame = 1
Query: 1 NVSWRVQEAAEKISAIWTAYHDERADSLGTVIPGDSLLDMQTKAKKCPMFILPVWRDGGHFMILSQYQDACFLLTFLEDYKVNPAGAQPYATISMYGDLVKTKGLGLLRADLTPNLTKKEVERLVRLLIRFYSPHAHHYVEAFNLKPGEFDLEKFLQETPRD 486
N+ +E E I+ IWTAYHDER DSLGTVIPGDSL +Q KAKKCPMF+LPVWRDGGHFM+LSQYQD CFLLT+LEDYKVNP GAQPYATISMY DLV +KGLGL+RAD+TPNLTKKEV+RLVRLLIRFYSPHAHH+VEAFNL+P EFDL+K LQETPRD
Sbjct: 66 NLPLLAKEEKESIADIWTAYHDEREDSLGTVIPGDSLDGLQAKAKKCPMFVLPVWRDGGHFMMLSQYQDKCFLLTYLEDYKVNPGGAQPYATISMYNDLVDSKGLGLIRADITPNLTKKEVDRLVRLLIRFYSPHAHHHVEAFNLRPQEFDLDKLLQETPRD 227
BLAST of mRNA_H-elongata_contig90331.16518.1 vs. uniprot
Match: A0A836CMH7_9STRA (ATP11 protein-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMH7_9STRA) HSP 1 Score: 147 bits (370), Expect = 3.510e-41 Identity = 69/152 (45.39%), Postives = 104/152 (68.42%), Query Frame = 1
Query: 37 ISAIWTAYHDERADSLGTVIPGDSLLDMQTKAKKCPMFILPVWR--DGGHFMILSQYQDACFLLTFLEDYKVNPAGAQPYATISMYGDLVKTKGLGLLRADLTPNLTKKEVERLVRLLIRFY--SPHAHHYVEAFNLKPGEFDLEKFLQETP 480
+S IW +HD R D++G + G L ++ +AK+ PMFI PV R DGG+FM+L Q+Q + FLLTFL+DY+ NP+GAQPY ++S++ DL ++KG+GL+RAD+T L++ E R++ L+ R+Y S + V AFN P EF+ E ++ P
Sbjct: 78 VSDIWRQFHDARKDAIGATLSGAELQELLKRAKESPMFIFPVHRGADGGYFMLLCQFQGSHFLLTFLDDYRTNPSGAQPYMSVSLFSDLAESKGVGLVRADVTAQLSRAEGVRVLDLMQRYYIGSEELYGMVRAFNHAPAEFNFEVYMSTVP 229
BLAST of mRNA_H-elongata_contig90331.16518.1 vs. uniprot
Match: A0A8K1CNF2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNF2_PYTOL) HSP 1 Score: 133 bits (335), Expect = 6.430e-36 Identity = 65/151 (43.05%), Postives = 93/151 (61.59%), Query Frame = 1
Query: 16 VQEAAEKISAIWTAYHDERADSLGTVIPGDSLLDMQTKAKKCPMFILPVWRDGGHFMILSQYQDACFLLTFLEDYKVNPAGAQPYATISMYGDLVKTKGLGLLRADLTPNLTKKEVERLVRLLIRFYSPHA-HHYVEAFNLKPGEFDLEKF 465
V E +I IW YH E+ D++ V+ G + +A+ P FI PV+R GG F +L Q+QD CFL+T+LE +K NPA A P T+S++ DL+ K +GLLRAD+ L K E E+L+ L+R YS + +V+ FN +P EFD + F
Sbjct: 80 VNEEPTQIRRIWEDYHSEKDDAIARVLDGTEYSTLMERARSAPYFIFPVYRQGGFFNMLCQFQDKCFLVTYLEAFKENPALAPPCVTVSLFDDLLAEKDVGLLRADVVNMLDKAETEKLLNQLLRSYSNEKLYDWVDKFNNRPNEFDFDAF 230
BLAST of mRNA_H-elongata_contig90331.16518.1 vs. uniprot
Match: A0A485KLM8_9STRA (Aste57867_8902 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KLM8_9STRA) HSP 1 Score: 131 bits (329), Expect = 1.700e-35 Identity = 65/159 (40.88%), Postives = 100/159 (62.89%), Query Frame = 1
Query: 19 QEAAEKISAIWTAYHDERADSLGTVIPGDSLLDMQTKAKKCPMFILPVWR------DGGHFMILSQYQDACFLLTFLEDYKVNPAGAQPYATISMYGDLVKTKGLGLLRADLTPNLTKKEVERLVRLLIRFYSPHA-HHYVEAFNLKPGEFDLEKFLQE 474
+E+ + I IW+ YH+E++D++ V+ D L + +AKKC F+ PV+R + G F +LSQ+QD CFLLT L+ Y+ NPA A P T+S++ DLV+TK L L+R D+ L K E L+ L++ Y + + +EAFNL+P EF+ + +L E
Sbjct: 28 KESPDAIRRIWSEYHEEKSDAMARVLTADDLKTLMERAKKCAFFVFPVYRVNKDTNETGFFTMLSQFQDKCFLLTTLDAYRENPAQAPPCLTVSLFDDLVETKELALVRGDVANLLDKPEASALLDALLQRYVDNTLYDTIEAFNLRPHEFNFDAYLAE 186
BLAST of mRNA_H-elongata_contig90331.16518.1 vs. uniprot
Match: A0A024TLC0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TLC0_9STRA) HSP 1 Score: 127 bits (318), Expect = 1.100e-33 Identity = 67/162 (41.36%), Postives = 93/162 (57.41%), Query Frame = 1
Query: 19 QEAAEKISAIWTAYHDERADSLGTVIPGDSLLDMQTKAKKCPMFILPVWR------DGGHFMILSQYQDACFLLTFLEDYKVNPAGAQPYATISMYGDLVKTKGLGLLRADLTPNLTKKEV-ERLVRLLIRFYSPHAHHYVEAFNLKPGEFDLEKFLQETPR 483
+E + I IW YHD + D+LGT + L + + KKC F+ PV+R + G F +LSQ+QD CFLLT L+ Y+ NP+ A P T+S+Y DLV +K L L+R D+ L K E E L LL R+ VEAFNLKP +F+ + +L E +
Sbjct: 43 KETPDAIRRIWGEYHDAKTDALGTSLTATQLDTLTARGKKCAFFVFPVYRTNAETKEEGFFTMLSQFQDKCFLLTTLDAYRENPSQAPPCLTVSIYDDLVSSKELALVRGDVANVLDKPEASELLTALLARYVDDDLFKTVEAFNLKPHDFNFDAYLAECKK 204
BLAST of mRNA_H-elongata_contig90331.16518.1 vs. uniprot
Match: K3X797_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X797_GLOUD) HSP 1 Score: 127 bits (319), Expect = 1.310e-33 Identity = 65/155 (41.94%), Postives = 93/155 (60.00%), Query Frame = 1
Query: 22 EAAEKISAIWTAYHDERADSLGTVIPGDSLLDMQTKAKKCPMFILPVWRDGGHFMILSQYQDACFLLTFLEDYKVNPAGAQPYATISMYGDLVKTKGLGLLRADLTPNLTKKEVERLVRLLIRFYSPHA-HHYVEAFNLKPGEFDLEKFLQETPR 483
E+ E+I AIW YH E+ DSL T + + ++ +A P F+ PV+R G F ++ Q+QD CFLLT+LE +K NP A P T+S+Y DLV+ K +GLLRAD+ L KKE + L+ L+ YS +V FN +P +FD E + E +
Sbjct: 64 ESQEQIRAIWENYHREKDDSLATTLASEQYANLVQRATASPFFLFPVYRKEGFFNMICQFQDTCFLLTYLEAFKENPGLAPPCLTVSLYDDLVENKQIGLLRADVINMLDKKESQVLLDQLVASYSDEKLFAWVHRFNHEPEQFDFEAYRLEMQK 218
BLAST of mRNA_H-elongata_contig90331.16518.1 vs. uniprot
Match: A0A4D9D345_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D345_9STRA) HSP 1 Score: 125 bits (314), Expect = 1.920e-33 Identity = 58/145 (40.00%), Postives = 94/145 (64.83%), Query Frame = 1
Query: 43 AIWTAYHDERADSLGTVIPGDSLLDMQTKAKKCPMFILPVWRDGGHFMILSQYQDACFLLTFLEDYKVNPAGAQPYATISMYGDLVKTKGLGLLRADLTPNLTKKEVERLVRLLIRFYSPHAHHY--VEAFNLKPGEFDLEKFLQ 471
A+W YH ER D+L + IP ++ +AK +F+ PV+R+GG+ ++SQ+QD CFL TFLEDY+ NP A P+ +++Y + + KGLGLLR D++ +LT++E E L+ L+ Y+ H+ Y + FN +P F E++++
Sbjct: 19 AMWQEYHKERRDALASSIPSQQFKILKDRAKASRVFLYPVFREGGYMTLISQFQDTCFLFTFLEDYRKNPRAATPWMCLTLYDEFLVDKGLGLLRGDVSHHLTREEGEYLITQLVEHYT-HSDMYKTLWTFNHEPKAFSFERYVR 162
BLAST of mRNA_H-elongata_contig90331.16518.1 vs. uniprot
Match: W4GJX1_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GJX1_9STRA) HSP 1 Score: 125 bits (315), Expect = 3.270e-33 Identity = 67/162 (41.36%), Postives = 94/162 (58.02%), Query Frame = 1
Query: 19 QEAAEKISAIWTAYHDERADSLGTVIPGDSLLDMQTKAKKCPMFILPVWR------DGGHFMILSQYQDACFLLTFLEDYKVNPAGAQPYATISMYGDLVKTKGLGLLRADLTPNLTKKEVERLV-RLLIRFYSPHAHHYVEAFNLKPGEFDLEKFLQETPR 483
QE + I IW YHD ++D+L TV+ L + + KKC F+ PV+R + G F +LSQ+QD CFLLT L+ Y+ NPA A P T+S++ DLV +K L L+R D+ L K E L+ +L R+ VEAFNLKP EF+ + +L E +
Sbjct: 43 QETPDAIRRIWGEYHDAKSDALATVLTAAELETLIARGKKCSFFVFPVYRVNSETKEEGFFTMLSQFQDKCFLLTTLDAYRENPAQAPPCLTVSLFDDLVPSKELALVRGDVANVLDKPEASVLLDAVLARYVDDDLFSTVEAFNLKPHEFNFDAYLAECKK 204
BLAST of mRNA_H-elongata_contig90331.16518.1 vs. uniprot
Match: A0A7S2DR12_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DR12_9STRA) HSP 1 Score: 124 bits (311), Expect = 8.030e-33 Identity = 63/153 (41.18%), Postives = 87/153 (56.86%), Query Frame = 1
Query: 22 EAAEKISAIWTAYHDERADSLGTVIPGDSLLDMQTKAKKCPMFILPVWRDGGHFMILSQYQDACFLLTFLEDYKVNPAGAQPYATISMYGDLVKTKGLGLLRADLTPNLTKKEVERLVRLLIRFYSPHAHHYVEAFNLKPGEFDLEKFLQETP 480
E+ E++ IW YH ++ + V + AKKCP+FI PV RD GHF++LSQ Q+ LLT+LEDYK +P A PY TIS++ D KG+ L R D+ L+ E +RL+ L+ +Y V AFN GEFD E L++ P
Sbjct: 43 ESRERVEEIWRTYHSKQDTCIADVWEAGEYKSFRALAKKCPLFIFPVRRDKGHFVMLSQVQEQHVLLTYLEDYKKDPVAAVPYLTISLFDDFAADKGIVLARGDICNTLSLDESQRLLGLMKTYYGGPRQEDVRAFN--KGEFDFEAHLRDCP 193
BLAST of mRNA_H-elongata_contig90331.16518.1 vs. uniprot
Match: A0A7S0NPA7_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NPA7_9EUKA) HSP 1 Score: 123 bits (309), Expect = 3.940e-32 Identity = 59/152 (38.82%), Postives = 95/152 (62.50%), Query Frame = 1
Query: 34 KISAIWTAYHDERADSLGTVIPGDSLLDMQTKAKKCPMFILPVWRDGGHFMILSQY--QDACFLLTFLEDYKVNPAGAQPYATISMYGDLVKTKGLGLLRADLTPN-LTKKEVERLVRLLIRFYSPHAHHYVEAFNLKPGEFDLEKFLQETP 480
++++IW +YH +R G IP M +AK+ PMF+ PV RDGGHF++ SQ+ + + F +T+LEDY+ +P A P+ ++ ++GDL+ +K +GL+RA+ P+ L + E E L+ LL R+YS A+ AFN FD++ +L P
Sbjct: 76 RVASIWESYHKDRDGVAGVAIPLAEHTLMMQRAKESPMFLFPVRRDGGHFLLFSQFDAKSSMFAMTYLEDYRRSPESAPPWISVHLFGDLLDSKQIGLMRAEADPDRLWRSEAEHLLLLLRRYYSTDAYDRAWAFNHAQRHFDIDSYLDSCP 227 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig90331.16518.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig90331.16518.1 >prot_H-elongata_contig90331.16518.1 ID=prot_H-elongata_contig90331.16518.1|Name=mRNA_H-elongata_contig90331.16518.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=163bp NVSWRVQEAAEKISAIWTAYHDERADSLGTVIPGDSLLDMQTKAKKCPMFback to top mRNA from alignment at H-elongata_contig90331:215..1652- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig90331.16518.1 ID=mRNA_H-elongata_contig90331.16518.1|Name=mRNA_H-elongata_contig90331.16518.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1438bp|location=Sequence derived from alignment at H-elongata_contig90331:215..1652- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig90331:215..1652- >mRNA_H-elongata_contig90331.16518.1 ID=mRNA_H-elongata_contig90331.16518.1|Name=mRNA_H-elongata_contig90331.16518.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=978bp|location=Sequence derived from alignment at H-elongata_contig90331:215..1652- (Himanthalia elongata Himel1 dioecious)back to top |