mRNA_H-elongata_contig903.16515.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig903.16515.1 vs. uniprot
Match: D8LRT0_ECTSI (Kelch motif family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRT0_ECTSI) HSP 1 Score: 482 bits (1240), Expect = 1.280e-169 Identity = 211/273 (77.29%), Postives = 243/273 (89.01%), Query Frame = 1
Query: 172 MTWQEVRCGGDLPSPRYGHSCHIVGSRMFVIGGRGHKGQLYRDVHFLDLVDWTWVKVNATSTGPPPRFWQGSVLVGHKIVIHGGWNGRNQCHDDLWVFDTDSFSWMQPRTGGLPPSARYGHSMMLLPDGRILVFGGATVNDICVPTYHSDLRQLDTETMLWSKAKTVDDVKISGRCNHTLTSDEEGRSAILFGGWGLGGLQNQGTNKRDGAVTLVACNMPLYDPITINMPVLRGRGEPEHRYGHASVSVGNAFFVFGGWTGQQASSDVMVFEL 990
MTWQEVRCGGDLP RYGHSCH+VGSRMF++GG+G GQLYRDVHFLDLVDWTWV VNATSTGP PRFWQ SVLVGHKIV+HGGWNG N C++DLWVFDTDSF+WMQPRTGGLPP+ARYGH+M+LLPDGRIL+ GGAT+++ CVP YH DLRQLDTETMLWSKAKT ++IS RCNHTLTSDEEGR+A+LFGGWGLGGLQ+ NKR GAVTL AC+M ++ ++ N+P+LRGRGEPEH+YGH VSVGNAFFVFGGW GQQA ++++VFEL
Sbjct: 1 MTWQEVRCGGDLPDARYGHSCHLVGSRMFIVGGKGRSGQLYRDVHFLDLVDWTWVAVNATSTGPSPRFWQASVLVGHKIVVHGGWNGSNHCYEDLWVFDTDSFAWMQPRTGGLPPTARYGHAMVLLPDGRILLSGGATIDEKCVPVYHKDLRQLDTETMLWSKAKTTGGIRISSRCNHTLTSDEEGRAALLFGGWGLGGLQHHENNKRAGAVTLAACSMLPHEAVSTNLPLLRGRGEPEHKYGHTCVSVGNAFFVFGGWNGQQACNEIVVFEL 273
BLAST of mRNA_H-elongata_contig903.16515.1 vs. uniprot
Match: A0A7S4D7S8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D7S8_HETAK) HSP 1 Score: 393 bits (1010), Expect = 1.530e-133 Identity = 191/335 (57.01%), Postives = 228/335 (68.06%), Query Frame = 1
Query: 10 TWTKAATSGDRVPARGGHTCVVADFQLVVFGGTYYKGDGKFVYLGDTWVLDIESMTWQEVRCGGDLPSPRYGHSCHIVGSRMFVIGGRGHKGQL-----YRDVHFLDLVDWTWVKVNATSTGPPPRFWQGSVLVGHKIVIHGGWNGRNQCHDDLWVFDTDSFSWMQPRTGGLPPSARYGHSMMLLPDGRILVFGGATVN----DICVPTYHSDLRQLDTETMLWSKAKTVDDVKISGRCNHTLTSDEEGRSAILFGGWGLGGLQNQGTNKRDGAVTLVACNMPLYDPITINMPVLRGRGEPEHRYGHASVSVGNAFFVFGGWTGQQASSDVMVFE 987
+W+K G R+ RGGH+ VVAD+QL+VFGGT Y G GKF YL DT VLD+E+MTWQ VRCGG+LP+PRYGH+C +VGSRMFV+GG+G +RDVH LDLVDW WV +NATSTGP PRF S VG KIV+HGGW+G C DLWVFDTDSF+W+QPR GGLPPS RYGH++ LLPDGR+L GGA V P Y DLRQLDTETM WSK + K+SGR HT T + + +FGGWGLGGLQ + TN RDGA ++ A + + +P LR R PEHRYG VG+ VFGGW GQQA SD++ E
Sbjct: 15 SWSKVTPQGYRLTPRGGHSAVVADYQLIVFGGTSYDGGGKFSYLNDTCVLDVETMTWQLVRCGGNLPAPRYGHACELVGSRMFVLGGKGXXXXXXXXGCFRDVHALDLVDWVWVPINATSTGPSPRFNAASAAVGRKIVVHGGWDGEAACLGDLWVFDTDSFAWVQPRVGGLPPSPRYGHTLTLLPDGRLLALGGAAVPAPGAGAVAPQYLEDLRQLDTETMAWSKPARAGE-KLSGRFGHTTTLLDSS-ALFIFGGWGLGGLQEKATNNRDGAHSVCAIGIEGNEA-RYAVPALRSRKAPEHRYGQTCTRVGSMLLVFGGWNGQQALSDLIAIE 346
BLAST of mRNA_H-elongata_contig903.16515.1 vs. uniprot
Match: A0A836CGB4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGB4_9STRA) HSP 1 Score: 358 bits (919), Expect = 4.050e-119 Identity = 179/352 (50.85%), Postives = 227/352 (64.49%), Query Frame = 1
Query: 13 WTKAAT--SGDRVPARGGHTCVVADFQLVVFGGTYYKGDGKFVYLGDTWVLDIESMTWQEVRCGGDLPSPRYGHSCHIVGSRMFVIGGRGHKGQLYRDVHFLDLVDWTWVKVNATSTGPPPRFWQGSVLVGHKIVIHGGWNGRNQCHDDLWVFDTDSFSWMQPRTGGLPPSARYGHSMMLLPDGRILVFGGATVN-DICVPTYHSDLRQLDTETMLWSKAKTVDDVKISGRCNHTLT-----SDEEGR---------------SAILFGGWGLGGLQ----NQGTNKRDGAVTLVACNMPLYDPITINMPVLRGRGEPEHRYGHASVSVGNAFFVFGGWTGQQASSDVMVFE 987
WT+A T +G R+PARGGH+CV AD QLVVFGG YY+G KF YL D W++D E ++WQ V+C G P PRY H C +VGSRMFVIGG+G +L+RDV FLDL+ WTW V+ T+ GP RF S LVG KIV+HGGWNG + C+ DLWVF+T+SFSW+QP+TGG+ P AR+GH ++L+PDGR+L FGGA+ + VP Y SDLRQLDTETM WSK +T V +GR HTLT EEG S +L+GGWG+GGLQ GT K+ + P + + +P G GE R+GH VG+ FVFGGW QQA SD+++ +
Sbjct: 11 WTRAQTQTNGVRIPARGGHSCVSADMQLVVFGGHYYEGAHKFEYLNDVWLVDAEKLSWQPVQCSGTPPEPRYSHCCQLVGSRMFVIGGKGRGSKLFRDVWFLDLLSWTWYPVHPTTIGPTARFGHASTLVGRKIVVHGGWNGSDTCYGDLWVFNTESFSWLQPKTGGIAPCARFGHQLVLVPDGRLLCFGGASTSAQQPVPEYQSDLRQLDTETMAWSKPRTQGLVP-AGRYGHTLTLLQHQQGEEGGQXXXXXXXXXXGGGVSLVLYGGWGMGGLQAASVKGGTAKKSSVAVMDVAEEPQL--VDVEVPATVG-GEVVSRHGHTCCVVGSTVFVFGGWDAQQALSDLLMVQ 358
BLAST of mRNA_H-elongata_contig903.16515.1 vs. uniprot
Match: A0A7S1UIK9_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UIK9_9STRA) HSP 1 Score: 354 bits (908), Expect = 2.900e-118 Identity = 171/332 (51.51%), Postives = 221/332 (66.57%), Query Frame = 1
Query: 1 PIVTWTKAATSGDRVPARGGHTCVVADFQLVVFGGTYYKGDGKFVYLGDTWVLDIESMTWQEVRCGGDLPSPRYGHSCHIVGSRMFVIGGRGHKGQLYRDVHFLDLVDWTWVKVNATSTGPPPRFWQGSVLVGHKIVIHGGWNGRNQCHDDLWVFDTDSFSWMQPRTGGLPPSARYGHSMMLLPDGRILVFGGATVNDICVPTYHSDLRQLDTETMLWSKAKTVDDVKISGRCNHTLTSDEEGRSAILFGGWGLGGLQ-NQGTNKRDGAVTLVACNMPLYDPITINMPVLRGRGEP-EHRYGHASVSVGNAFFVF-GGWTGQQASSDVMVFE 987
P + W K +G PARGGH+ V+A+ QLVVFGG YYKGD F Y D +VLD+ES+TWQ V C G++P PRYGHS +VGSRMFV+GG+G +G+L+RD++FLDL+DW WV VNAT+ GP PRF ++LVG KIV+HGGW+G +C D WVFDT +F+W+QPR GLPPS R+GH++ LLPDGRI+ FGGA V+++ VP Y+ D RQLD E M WSK ++ + S R HT G +LFGGWG GG Q + NKR GAVT + ++D G P +H YGH ++ VF GGW G +A SD++V E
Sbjct: 11 PQLAWAKQLCNGQIPPARGGHSAVLAESQLVVFGGHYYKGDSAFEYSNDVYVLDVESLTWQRVTCSGEVPEPRYGHSAVLVGSRMFVMGGKGSQGRLFRDMYFLDLIDWKWVPVNATTAGPTPRFEHATLLVGRKIVLHGGWDGNTRCMGDTWVFDTATFTWIQPRISGLPPSPRHGHTLNLLPDGRIVCFGGAGVDNMGVPLYYDDFRQLDPEKMQWSKVRSSGMLP-SARMGHTCVL--LGNRLVLFGGWGYGGCQCPEEGNKRQGAVTAL-----VFDIAKGKWSTTEHGGRPAQHTYGHTCDTIAGTTMVFYGGWNGHEAVSDLVVME 334
BLAST of mRNA_H-elongata_contig903.16515.1 vs. uniprot
Match: A0A067BWJ1_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BWJ1_SAPPC) HSP 1 Score: 281 bits (720), Expect = 3.050e-89 Identity = 142/359 (39.55%), Postives = 205/359 (57.10%), Query Frame = 1
Query: 4 IVTWTKAATSGDRVPARGGHTCVVADFQLVVFGGTYYKGDGKFVYLGDTWVLDIESMTWQEVRCGGDLPSPRYGHSCHIVGSRMFVIGGRGHKGQLYRDVHFLDLVDWTWVKVNATSTGPPPRFWQGSVLVGHKIVIHGGWNGRNQCHDDLWVFDTDSFSWMQPRTGGLPPSARYGHSMMLLPDGRILVFGGATVNDI--CVPTYHSDLRQLDTETMLWSKAKTVDDVKISGRCNHTLTSDEEGRSAILFGGWGLGGLQNQGTNKRDGAVTLVACNMPL-------YDPITINMPVLRGRGEPEH---------------------RYGHASVSVGNAFFVFGGWTGQQASSDVMVFEL 990
+++W+ G ARGGH+ ++A QLV+FGG Y+ G+ FVYL + WVLD+E+ W +V+C G P+PRY HS +VG++MFV GG+G KG++YRD+H+LDL W W VN T+ PP R + VG K+V GGW+G+N+ DLWVFDT++F+W+QP G PP+ARYGHSM LL DGRI+++GG +V + Y +DL LDTETM W + + D I +HT+T GR+ + GGW G + D A+ A + YD ++ L G + H RYGH++ VG F+FGGW G ++ ++++V +L
Sbjct: 20 VMSWSMPPMDGSPPTARGGHSMLLAGQQLVLFGGHYFGGEAGFVYLNEVWVLDLETSAWSQVKCEGKPPAPRYSHSATLVGAKMFVFGGKGDKGKIYRDMHYLDLETWHWYVVNWTTESPPERLGHSDLAVGTKLVFFGGWDGQNKTFKDLWVFDTETFAWLQPHVAGTPPTARYGHSMALLDDGRIVLYGGQSVKTVPEVRVEYFNDLYTLDTETMAWMRPRVTGDQPIP-TFSHTMTM--VGRTLYIVGGWS--GTERSPIYMGDKAMRTTAKALAREERLQSGYDAQPVDYRRLLGVSKYVHAIDCDSMVWSQPISEGCHVTNRYGHSAAVVGTHLFLFGGWDGNRSMNELVVADL 373
BLAST of mRNA_H-elongata_contig903.16515.1 vs. uniprot
Match: A0A6G0XGZ5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XGZ5_9STRA) HSP 1 Score: 270 bits (690), Expect = 7.150e-85 Identity = 146/363 (40.22%), Postives = 198/363 (54.55%), Query Frame = 1
Query: 4 IVTWTKAATSGDRVPARGGHTCVVADFQLVVFGGTYYKGDGKFVYLGDTWVLDIESMTWQEVRCGGDLPSPRYGHSCHIVGSRMFVIGGRGHKGQLYRDVHFLDLVDWTWVKVNATSTGPPPRFWQGSVLVGHKIVIHGGWNGRNQCHDDLWVFDTDSFSWMQPRTGGLPPSARYGHSMMLLPDGRILVFGGATVN---DICVPTYHSDLRQLDTETMLWSKAKTVDDVKISGRCNHTLTSDEEGRSAILFGGWGLGGLQNQGTNKRDGAVTLVACNMP---------------------------LYDPITINMPVLRGRG-EPEHRYGHASVSVGNAFFVFGGWTGQQASSDVMVFELGES 999
+ TW+ + G ARGGHT ++A +LV+FGG Y+ GDG FVYL DT LD+E+ TW +V+C G P+PRY HS +VG++MFV GG+G KG L+RD+H+LDL W W V T+ P RF V VG KIVI GGW+G ++ DLWVFDT+SF+W++P+ G PP R GH M LL DGRILVFGG + D+ Y +D+ LDTETM+WS+ +T D + G HT+ +D + GGW G + D V A + + D T+ R +G +RYGH VG F+FGGW G +A ++V L ++
Sbjct: 11 VFTWSAPSMDGLPPSARGGHTMLLAGQRLVLFGGHYFGGDGAFVYLNDTHALDLETSTWCQVKCQGKPPAPRYNHSATLVGNKMFVFGGKGGKGTLFRDMHYLDLESWHWYSVTWTTESPSERFGHADVAVGTKIVISGGWDGSSKTFKDLWVFDTESFAWIKPKVTGTPPPPRQGHKMALLDDGRILVFGGYALKASGDLS-GEYFNDVYALDTETMIWSRPRTTGDFPL-GTFGHTICADSF--KVYVVGGWS--GTERSPITMGDKVVNETAKALAREQSLRSGDNVSAKSFKAELSKSKYLHVLDCATMEWSCPRSQGLAVANRYGHTCALVGPHLFLFGGWDGNRALHQLVVAALPDN 367
BLAST of mRNA_H-elongata_contig903.16515.1 vs. uniprot
Match: A0A8J2SKS0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SKS0_9STRA) HSP 1 Score: 267 bits (682), Expect = 4.130e-84 Identity = 136/331 (41.09%), Postives = 182/331 (54.98%), Query Frame = 1
Query: 1 PIVTWTKAATSGDRVPARGGHTCVVADFQLVVFGGTYYKGDGKFVYLGDTWVLDIESMTWQEVRCGGDLPSPRYGHSCHIVGSRMFVIGGRGHKGQLYRDVHFLDLVDWTWVKVNATSTGPPPRFWQGSVLVGHKIVIHGGWNGRNQCHDDLWVFDTDSFSWMQPRTGGLPPSARYGHSMMLLPDGRILVFGGATVNDIC-VPTYHSDLRQLDTETMLWSKAKTVDDVKISGRCNHTLTSDEEGRSAILFGGWGLGGLQNQGTNKRDGAVTLVACNMPLYDPITINMPVLRGRGEPEHRYGHASVSVGNAFFVFGGWTGQQASSDVMVFEL 990
P +++ + T GD ARGGH+ +A+ Q+++FGG+ Y G+F Y DT+ LD E W +V C G+ P+PRYGHS ++GSRMFV GGRG G L R GW+G QC DLWVF++D+F+W+QPR G+ PS RYGHS+ LL DGRIL FGG TV+ I VP YH+DLRQLDTETM+W+K+ S R HT T + G I+FGGWG GGLQN+ N+ + + P +P + E H+YGH +VG ++ GGW G+QA+SD+ L
Sbjct: 8 PALSFARIVTDGDSPSARGGHSAAMAEDQVIIFGGSCYTSGGRFAYFNDTFTLDTEHHLWHKVACSGEAPTPRYGHSAELIGSRMFVFGGRGEVGTL-RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWDGHMQCMGDLWVFNSDTFTWVQPRCAGIQPSPRYGHSLSLLTDGRILCFGGCTVSSIFPVPQYHNDLRQLDTETMIWTKSTIQGGEPPSKRHGHTTT--KVGNGLIVFGGWGSGGLQNRACNQEGSGSFRLLESSPGTSIERWTVP--QTYQEIAHKYGHTMSAVGTRLYIIGGWNGKQATSDIYQIHL 333
BLAST of mRNA_H-elongata_contig903.16515.1 vs. uniprot
Match: A0A1V9YGE9_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YGE9_9STRA) HSP 1 Score: 268 bits (685), Expect = 4.710e-84 Identity = 138/358 (38.55%), Postives = 201/358 (56.15%), Query Frame = 1
Query: 7 VTWTKAATSGDRVPARGGHTCVVADFQLVVFGGTYYKGDGKFVYLGDTWVLDIESMTWQEVRCGGDLPSPRYGHSCHIVGSRMFVIGGRGHKGQLYRDVHFLDLVDWTWVKVNATSTGPPPRFWQGSVLVGHKIVIHGGWNGRNQCHDDLWVFDTDSFSWMQPRTGGLPPSARYGHSMMLLPDGRILVFGGATVNDI--CVPTYHSDLRQLDTETMLWSKAKTVDDVKISGRCNHTLTSDEEGRSAILFGGWGLGGLQNQGTNKRDGAVTLVACNMPL-------YDPITINMPVLRGRGEPEH---------------------RYGHASVSVGNAFFVFGGWTGQQASSDVMVFEL 990
+TW+ G RGGHT ++A QLV+FGG Y+ G+ FVYL + WVLD+E+ W +V+C G P+PRY H+ +VG++MFV GG+G KG+ YRD+H+LDL W W VN T+ P RF + VG K+V GGW+G+N+ + DLWVFDT++F+W+QP+ G PP+ARYGH+M LL DGRI+++GG +V + Y +D+ LDTETM W++ + D + H + D GR+ + GGW G + D A+ A + YD ++ L G + H RYGH + VG F FGGW G ++ ++++V +L
Sbjct: 14 LTWSTPPMDGFPPSPRGGHTMLLAGQQLVLFGGHYFGGESGFVYLNEVWVLDLETSAWCQVKCEGKPPAPRYNHTATLVGAKMFVFGGKGDKGKAYRDMHYLDLETWHWFVVNWTTDSPTERFGHADLAVGTKLVYFGGWDGQNKTYKDLWVFDTETFAWIQPKVAGTPPTARYGHTMGLLDDGRIVLYGGQSVKMLPQVGVEYFNDVYMLDTETMAWTRPRITGDQPVP-TFGHRMIID--GRTVYVVGGWS--GTERSPIFMGDKALRTTAKALAREERLQSGYDAQPVDYRRLLGVSKYVHALDVDGMVWTQPISEGCQVSNRYGHGAAVVGAHVFFFGGWDGNRSMNELVVADL 366
BLAST of mRNA_H-elongata_contig903.16515.1 vs. uniprot
Match: A0A7S2SVI7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVI7_9STRA) HSP 1 Score: 262 bits (670), Expect = 9.090e-83 Identity = 138/307 (44.95%), Postives = 170/307 (55.37%), Query Frame = 1
Query: 40 RVPARGGHTCVVADFQLVVFGGTYYKGDGKFVYLGDTWVLDIESMTWQEVRCGGDLPSPRYGHSCHIVGSRMFVIGGRGHKGQLYRDVHFLDLVDWTWVKVNATSTGPPPRFWQGSVLVGHKIVIHGGWNGRNQCHDDLWVFDTDSFSWMQPRTGGLPPSARYGHSMMLLPDGRILVFGGATVNDICVPTYHSDLRQLDTETMLWSKAKTVDDVKISGRCNHTLTSDEEGRSAILFGGWGLGGLQNQGTNKRDGAVTLVACNMPLYDPITINMPVLRGRGEPEHRYGHASVSVGNAFFVFGGWTGQQ 960
R RGGHT V D +VVFGG Y GDGKF Y DT V D+E+ TW V+C G++P PRYGHS +VG+RMF+ G GW+G+ QC DDLWVFDTDSF+WMQP+T G PSARYGHS+ LL DGRIL FGG ++ D +P YH DLRQL TETM WSK + +V SGR HTL + G +LFGGWGLGG Q N R GA +++ ++ + +T P+ + P HRYGH +G FVFGGW G+Q
Sbjct: 1 RPEPRGGHTAVQVDSSIVVFGGHSYAGDGKFEYYNDTHVFDVETSTWHLVKCSGEVPEPRYGHSVALVGNRMFMFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXGWDGKRQCMDDLWVFDTDSFTWMQPKTAGAGPSARYGHSLHLLEDGRILCFGGMSIPDNGIPEYHRDLRQLHTETMAWSKPRVDGEVPPSGRFGHTLCAF--GSQLVLFGGWGLGGNQTSAENPRAGAESIMMLDV---ESMTWWTPLPPRKTVP-HRYGHTVCLIGADLFVFGGWYGKQ 300
BLAST of mRNA_H-elongata_contig903.16515.1 vs. uniprot
Match: A0A485L7W0_9STRA (Aste57867_17468 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L7W0_9STRA) HSP 1 Score: 261 bits (667), Expect = 5.640e-81 Identity = 146/379 (38.52%), Postives = 207/379 (54.62%), Query Frame = 1
Query: 4 IVTWTKAATSGDRVPARGGHTCVVADFQLVVFGGTYYKGDGKFVYLGDTWVLDIESMTWQEVRCGGDLPSPRYGHSCHIVGSRMFVIGGRGHKGQLYRDVHFLDLVDWTWVKVNATSTGPPPRFWQGSVLVGHKIVIHGG----------------------WNGRNQCHDDLWVFDTDSFSWMQPRTGGLPPSARYGHSMMLLPDGRILVFGGATVN-----DICVPTYHSDLRQLDTETMLWSKAKTVDDVKISGRCNHTLTSDEEGRSAILFGGWG--------LGG---------------LQNQGTNKRDGAVTLVACNMPLY--DPITINMPVLRGRG-EPEHRYGHASVSVGNAFFVFGGWTGQQASSDVMV 981
+VTW+ G ARGGH+ ++A +LV+FGG Y+ G+G FVYL DT+VLD+ S TW +V+C G P+PRY HS ++G++MFV GG+G KG L+RD+++LDL W W VN T+ P RF + VG K+VI GG W+G ++ + DLWVFDT+SF+W++P+ G PP+ R+GH+M LL DGRILVFGG + DI YH D+ LDTETM W++ +T+ D + G HT + D G+ + GGW +G LQ+ T +A + L+ D T+ +G E +RYGH + VG F+FGGW G +A ++V
Sbjct: 17 VVTWSMPGMDGLPPSARGGHSTLLAGQRLVIFGGHYFGGEGFFVYLNDTYVLDLASSTWCQVKCEGKPPAPRYNHSATLIGNKMFVFGGKGDKGVLFRDMYYLDLESWHWFSVNWTTESPSERFGHADLAVGTKLVIFGGYSPLNPSDSTSDSVSDSNGQRRWDGSSKTYKDLWVFDTESFAWIKPKVTGTPPTPRHGHTMSLLEDGRILVFGGYMLQTSGGGDIS-GEYHKDVYTLDTETMAWTRPRTMGDFPL-GTFGHTTSLD--GQKLYVVGGWSGTERSQIYMGDKLVHETAKSLAREQRLQSGSTVSAKSFKAELATSKYLHVLDVATMEWYCPPSQGIEVANRYGHTATIVGPHLFLFGGWDGNRALHQLVV 391 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig903.16515.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig903.16515.1 >prot_H-elongata_contig903.16515.1 ID=prot_H-elongata_contig903.16515.1|Name=mRNA_H-elongata_contig903.16515.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=278bp MTWQEVRCGGDLPSPRYGHSCHIVGSRMFVIGGRGHKGQLYRDVHFLDLVback to top mRNA from alignment at H-elongata_contig903:10383..13401- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig903.16515.1 ID=mRNA_H-elongata_contig903.16515.1|Name=mRNA_H-elongata_contig903.16515.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3019bp|location=Sequence derived from alignment at H-elongata_contig903:10383..13401- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig903:10383..13401- >mRNA_H-elongata_contig903.16515.1 ID=mRNA_H-elongata_contig903.16515.1|Name=mRNA_H-elongata_contig903.16515.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1668bp|location=Sequence derived from alignment at H-elongata_contig903:10383..13401- (Himanthalia elongata Himel1 dioecious)back to top |