mRNA_H-elongata_contig90208.16509.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig90208.16509.1 vs. uniprot
Match: A0A6H5JH87_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH87_9PHAE) HSP 1 Score: 206 bits (524), Expect = 2.400e-55 Identity = 134/260 (51.54%), Postives = 154/260 (59.23%), Query Frame = 1
Query: 1 YMAPELVRDLPYDESVDLWAVGVVTFELLHGYTPFKPKLVLARSWDGIVREE---------RPETTGGGDSXXXXXXXXXGS--------------------MSVSESSGSIVNRRMFERSTPAAPGGGLERAWVAGQAHEALLFGR--EDD-----------------GGRVDCGGAWGGRGRR-------------GHGEADQLRLLDNIVRGNCCIRQDRVGETGADFIRQLLNISPVRRMSATRAAEHLFLGRPSK 597
Y+APELVRD+PYD +VD+WAVGVVT+ELLHGYTPF PKLV+ RSWDG+VREE R GG XXXXXXXX +SVSESSGSIVN+RMFERS P APGGGL+RAW+AGQAH+ALLFG+ E+D GGR G GH E DQL+LL+ +VRG + + VGE GADFI QLL +SP RRMSA AAEH FLG SK
Sbjct: 1110 YLAPELVRDVPYDAAVDMWAVGVVTYELLHGYTPFSPKLVVPRSWDGVVREEHVRRSNANNRSRLANGGSRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSVSESSGSIVNKRMFERSAPPAPGGGLDRAWLAGQAHQALLFGKGGENDEYQAERRTREGHGIAGSGGRXXXXXXXXGXXXXXXXXXXXXXXXXXGHREQDQLKLLEAVVRGGYEVEEGCVGEVGADFISQLLQVSPARRMSAAAAAEHPFLGPASK 1369
BLAST of mRNA_H-elongata_contig90208.16509.1 vs. uniprot
Match: D8LT50_ECTSI (Aurora kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT50_ECTSI) HSP 1 Score: 203 bits (517), Expect = 1.000e-54 Identity = 128/248 (51.61%), Postives = 151/248 (60.89%), Query Frame = 1
Query: 1 YMAPELVRDLPYDESVDLWAVGVVTFELLHGYTPFKPKLVLARSWDGIVREE---------RPETTGGGDSXXXXXXXXX---------------------GSMSVSESSGSIVNRRMFERSTPAAPGGGLERAWVAGQAHEALLFGREDDGGRVDCGGAWG-GRG------------------RRGHGEADQLRLLDNIVRGNCCIRQDRVGETGADFIRQLLNISPVRRMSATRAAEHLFLGRPSK 597
Y+APELVRD+PYD +VD+WAVGVVT+ELLHGYTPF PKLV+ RSWDG+VRE+ R GG XXXXXXXX G++SVSESSGSIVN+RMFERS P APGGGL+RAW+AGQAH+ALLFG+ + G G G GH E DQL+LL+ +VRG + + VG ADFI QLL ++P RRMSA AAEH FLG SK
Sbjct: 487 YLAPELVRDVPYDAAVDMWAVGVVTYELLHGYTPFSPKLVVPRSWDGVVREDYVRKSNANNRSRLANGGSRRXXXXXXXXXXXXXXXXXXXXXXXXXXGEGGTLSVSESSGSIVNKRMFERSAPPAPGGGLDRAWLAGQAHQALLFGKGGENDEYQAERRTGEGHGIAGXXXXXXXXXXXXXXXXXGHREQDQLKLLEAVVRGGYEVEEGCVGGVVADFISQLLRVTPARRMSAAAAAEHPFLGPASK 734
BLAST of mRNA_H-elongata_contig90208.16509.1 vs. uniprot
Match: A0C7X3_PARTE (Aurora kinase n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0C7X3_PARTE) HSP 1 Score: 65.9 bits (159), Expect = 1.690e-8 Identity = 26/38 (68.42%), Postives = 32/38 (84.21%), Query Frame = 1
Query: 1 YMAPELVRDLPYDESVDLWAVGVVTFELLHGYTPFKPK 114
YMAPE+V DLPYD +D+W+VGV+ +ELLHGY PFK K
Sbjct: 172 YMAPEIVSDLPYDYKIDIWSVGVLLYELLHGYAPFKGK 209
BLAST of mRNA_H-elongata_contig90208.16509.1 vs. uniprot
Match: A0BVJ1_PARTE (Aurora kinase n=2 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0BVJ1_PARTE) HSP 1 Score: 66.6 bits (161), Expect = 2.420e-8 Identity = 29/53 (54.72%), Postives = 38/53 (71.70%), Query Frame = 1
Query: 1 YMAPELVRDLPYDESVDLWAVGVVTFELLHGYTPFKPKL---VLARSWDGIVR 150
YMAPE+V DLPYD +D+W+VGV+ +ELLHGY PFK K + A G++R
Sbjct: 187 YMAPEIVSDLPYDYKIDIWSVGVLLYELLHGYAPFKGKEYKEIAANIKSGLIR 239
BLAST of mRNA_H-elongata_contig90208.16509.1 vs. uniprot
Match: A0CKV0_PARTE (Aurora kinase n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0CKV0_PARTE) HSP 1 Score: 65.5 bits (158), Expect = 5.740e-8 Identity = 26/38 (68.42%), Postives = 32/38 (84.21%), Query Frame = 1
Query: 1 YMAPELVRDLPYDESVDLWAVGVVTFELLHGYTPFKPK 114
YMAPE+V DLPYD +D+W+VGV+ +ELLHGY PFK K
Sbjct: 187 YMAPEIVSDLPYDYRIDIWSVGVLLYELLHGYAPFKGK 224
BLAST of mRNA_H-elongata_contig90208.16509.1 vs. uniprot
Match: A0A7J0EXR8_9ERIC (Protein kinase family protein n=1 Tax=Actinidia rufa TaxID=165716 RepID=A0A7J0EXR8_9ERIC) HSP 1 Score: 60.1 bits (144), Expect = 4.310e-7 Identity = 23/36 (63.89%), Postives = 31/36 (86.11%), Query Frame = 1
Query: 1 YMAPELVRDLPYDESVDLWAVGVVTFELLHGYTPFK 108
YMAPE+++ PYDE VD+W+VGV+ FELLHGY P++
Sbjct: 47 YMAPEILQFRPYDEKVDMWSVGVMLFELLHGYPPYR 82
BLAST of mRNA_H-elongata_contig90208.16509.1 vs. uniprot
Match: G0R3X7_ICHMG (Aurora kinase (Fragment) n=1 Tax=Ichthyophthirius multifiliis (strain G5) TaxID=857967 RepID=G0R3X7_ICHMG) HSP 1 Score: 62.0 bits (149), Expect = 6.740e-7 Identity = 20/36 (55.56%), Postives = 32/36 (88.89%), Query Frame = 1
Query: 1 YMAPELVRDLPYDESVDLWAVGVVTFELLHGYTPFK 108
YMAPE++ ++PYD +D+W++G++ +ELLHGYTPF+
Sbjct: 207 YMAPEMIENIPYDHKIDIWSLGILLYELLHGYTPFR 242
BLAST of mRNA_H-elongata_contig90208.16509.1 vs. uniprot
Match: A0A2R6RDM1_ACTCC (Serine/threonine-protein kinase n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6RDM1_ACTCC) HSP 1 Score: 60.1 bits (144), Expect = 1.560e-6 Identity = 23/36 (63.89%), Postives = 31/36 (86.11%), Query Frame = 1
Query: 1 YMAPELVRDLPYDESVDLWAVGVVTFELLHGYTPFK 108
YMAPE+++ PYDE VD+W+VGV+ FELLHGY P++
Sbjct: 184 YMAPEILQFRPYDEKVDMWSVGVMLFELLHGYPPYR 219
BLAST of mRNA_H-elongata_contig90208.16509.1 vs. uniprot
Match: UPI001FB07280 (serine/threonine-protein kinase ATG1t n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB07280) HSP 1 Score: 58.2 bits (139), Expect = 6.240e-6 Identity = 21/36 (58.33%), Postives = 30/36 (83.33%), Query Frame = 1
Query: 1 YMAPELVRDLPYDESVDLWAVGVVTFELLHGYTPFK 108
YMAPE++ PYDE VD+W++G++ FELLHGY P++
Sbjct: 182 YMAPEILGFQPYDEKVDMWSLGIILFELLHGYPPYR 217
BLAST of mRNA_H-elongata_contig90208.16509.1 vs. uniprot
Match: A0A7S1YEB6_9EUKA (Hypothetical protein (Fragment) n=2 Tax=Sexangularia sp. CB-2014 TaxID=1486929 RepID=A0A7S1YEB6_9EUKA) HSP 1 Score: 58.5 bits (140), Expect = 7.440e-6 Identity = 30/59 (50.85%), Postives = 36/59 (61.02%), Query Frame = 1
Query: 1 YMAPELVRDLPYDESVDLWAVGVVTFELLHGYTPF---KPKLVLARSWDGIVREERPET 168
YMAPE++R PYDE+VD WA+GV+ FEL G+TPF P V A D E P T
Sbjct: 190 YMAPEVLRGEPYDETVDYWAIGVICFELFTGWTPFVGETPAEVWANVLDFARVLENPRT 248 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig90208.16509.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig90208.16509.1 >prot_H-elongata_contig90208.16509.1 ID=prot_H-elongata_contig90208.16509.1|Name=mRNA_H-elongata_contig90208.16509.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=374bp MAPELVRDLPYDESVDLWAVGVVTFELLHGYTPFKPKLVLARSWDGIVREback to top mRNA from alignment at H-elongata_contig90208:324..2620+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig90208.16509.1 ID=mRNA_H-elongata_contig90208.16509.1|Name=mRNA_H-elongata_contig90208.16509.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2297bp|location=Sequence derived from alignment at H-elongata_contig90208:324..2620+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig90208:324..2620+ >mRNA_H-elongata_contig90208.16509.1 ID=mRNA_H-elongata_contig90208.16509.1|Name=mRNA_H-elongata_contig90208.16509.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2244bp|location=Sequence derived from alignment at H-elongata_contig90208:324..2620+ (Himanthalia elongata Himel1 dioecious)back to top |