prot_H-elongata_contig90174.16505.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig90174.16505.1
Unique Nameprot_H-elongata_contig90174.16505.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length63
Homology
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BLAST of mRNA_H-elongata_contig90174.16505.1 vs. uniprot
Match: D8LBM8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBM8_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 2.610e-22
Identity = 44/63 (69.84%), Postives = 49/63 (77.78%), Query Frame = 0 
Query:    1 MAGSIVQHCEVATSNNGWVIEVVNPETNTTLWLDPANPTGLLRWGSVLCQSL-LEGKRGEEDE 62
            + G+ +QHCEVA SNNGW+IEVVNP  N TLWLDP N T LLRWGSVLCQ+L  E   GEEDE
Sbjct:  347 LEGAAIQHCEVANSNNGWIIEVVNPSENVTLWLDPENATALLRWGSVLCQALQTERYDGEEDE 409
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig90174.16505.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBM8_ECTSI2.610e-2269.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig90174contigH-elongata_contig90174:2086..2274 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig90174.16505.1mRNA_H-elongata_contig90174.16505.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig90174 2086..2298 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig90174.16505.1 ID=prot_H-elongata_contig90174.16505.1|Name=mRNA_H-elongata_contig90174.16505.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=63bp
MAGSIVQHCEVATSNNGWVIEVVNPETNTTLWLDPANPTGLLRWGSVLCQ
SLLEGKRGEEDE*
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