mRNA_H-elongata_contig90029.16492.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig90029.16492.1
Unique NamemRNA_H-elongata_contig90029.16492.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig90029.16492.1 vs. uniprot
Match: D7G115_ECTSI (Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G115_ECTSI)

HSP 1 Score: 141 bits (355), Expect = 1.140e-35
Identity = 95/182 (52.20%), Postives = 107/182 (58.79%), Query Frame = 1
Query:    4 TDVDAETFGKLHQIKHVLERWEISGINRKLQLKPRRWEDIGAEGDLGHGGH----------GKDGHANGEGRAGTEAEGVSPQQPQLSVGSGVGDGIGAMGTKAELSSSVGGEQPGDHHRGGMVGGHGGGRG--ERATELLLILKWGGELTKLGQRQAIELGNSFRTIMYPDAGTGGLLRLH 513
            T+VDAETFGKL QIKHVLERWEISG NRKLQLKPR+W ++  E  L               GK   A G  +AG  A G S  +   ++  G             L     G + G        GG  G +   ERA++LLLILKWGGELT LGQRQAIELGNSFRTIMYPDAG GGLLRLH
Sbjct:  335 TEVDAETFGKLTQIKHVLERWEISGFNRKLQLKPRKWVEVD-ESTLSPEPEQRDRKKPKKAGKKAAAVGATKAGAAAAGRSADEHHDTISKGXXXXXXXXXXXXXLRK---GAEEGPWEEDATEGGAEGKKRKPERASQLLLILKWGGELTNLGQRQAIELGNSFRTIMYPDAGAGGLLRLH 512          
BLAST of mRNA_H-elongata_contig90029.16492.1 vs. uniprot
Match: A0A6H5L774_9PHAE (Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L774_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 6.350e-34
Identity = 93/182 (51.10%), Postives = 105/182 (57.69%), Query Frame = 1
Query:    4 TDVDAETFGKLHQIKHVLERWEISGINRKLQLKPRRWEDIGAEGDLGHGGHGKDGHANGEGRAGTEAEGVSPQQPQLSVGSGVGDGIGAMGTKAELSSSVGGEQPGDHHRGGMVGGHGGG------------RGERATELLLILKWGGELTKLGQRQAIELGNSFRTIMYPDAGTGGLLRLH 513
            T+VDAETFGKL QIKHVLERWEISG NRKLQLKPR+W ++  E  L      +  H      AG +A  V   +   + G  V D    +   A            D  R G   G G              + ERA++LLLILKWGGELT LGQRQAIELGNSFRTIMYPDAG GGLLRLH
Sbjct:  203 TEVDAETFGKLTQIKHVLERWEISGFNRKLQLKPRKWVEVD-ESTLSP--EPEQRHRKKPENAGKKAAAVGATKATAAAGRSV-DKDDTISKGAGAXXXXXXXXXXDTLRKGAEEGTGEXXXXXXXXXXKKRKPERASQLLLILKWGGELTNLGQRQAIELGNSFRTIMYPDAGAGGLLRLH 380          
BLAST of mRNA_H-elongata_contig90029.16492.1 vs. uniprot
Match: A0A835YTL2_9STRA (Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTL2_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 8.140e-21
Identity = 65/167 (38.92%), Postives = 74/167 (44.31%), Query Frame = 1
Query:   13 DAETFGKLHQIKHVLERWEISGINRKLQLKPRRWEDIGAEGDLGHGGHGKDGHANGEGRAGTEAEGVSPQQPQLSVGSGVGDGIGAMGTKAELSSSVGGEQPGDHHRGGMVGGHGGGRGERATELLLILKWGGELTKLGQRQAIELGNSFRTIMYPDAGTGGLLRLH 513
            D +   K  QI+HVLERWEISGINRKLQLKP  W                                V+P+                                             G   ERATEL LILKWGGELTKLG+RQA+ELG++FR  +YPD G GGLLRLH
Sbjct:   70 DQDVMTKYLQIRHVLERWEISGINRKLQLKPHAW--------------------------------VTPE---------------------------------------------GATTERATELELILKWGGELTKLGERQAMELGDNFRRAIYPDVGGGGLLRLH 159          
BLAST of mRNA_H-elongata_contig90029.16492.1 vs. uniprot
Match: A0A482S0U0_9ARCH (Diphosphoinositol-pentakisphosphate kinase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S0U0_9ARCH)

HSP 1 Score: 81.6 bits (200), Expect = 7.170e-15
Identity = 61/162 (37.65%), Postives = 82/162 (50.62%), Query Frame = 1
Query:   31 KLHQIKHVLERWEISGINRKLQLKPRRWEDIGAEGDLGHGGHGKDGHANGEGRAGTEAEGVSPQQPQLSVGSGVGDGIGAMGTKAELSSSVGGEQPGDHHRGGMVGGHGGGRGER-ATELLLILKWGGELTKLGQRQAIELGNSFRTIMYPDAGTGGLLRLH 513
            KL+QI+ VLERWEISGINRKLQ+KP +WE+   E  +                  +  E +S +       + +   I        L  S G ++  D             +  R ATE+L+ILKWGG+LT LG+ QA  LG  FRT  YP++  GG+LRLH
Sbjct:   51 KLYQIRDVLERWEISGINRKLQMKPLKWEEEEEEETISE--------------PTSPLEDISGRMVYAESCADLTLPICYSSNSTSLKISKGKDK--DXXXXXXXXXXXXXKKYRMATEILIILKWGGDLTPLGREQAENLGAKFRTEHYPESDNGGVLRLH 196          
BLAST of mRNA_H-elongata_contig90029.16492.1 vs. uniprot
Match: A0A1V9ZSC9_9STRA (Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZSC9_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 6.140e-14
Identity = 57/169 (33.73%), Postives = 80/169 (47.34%), Query Frame = 1
Query:    7 DVDAETFGKLHQIKHVLERWEISGINRKLQLKPRRWEDIGAEGDLGHGGHGKDGHANGEGRAGTEAEGVSPQQPQLSVGSGVGDGIGAMGTKAELSSSVGGEQPGDHHRGGMVGGHGGGRGERATELLLILKWGGELTKLGQRQAIELGNSFRTIMYPDAGTGGLLRLH 513
            D+DAE    ++ ++ VL+RW++ GINRK+Q+KPR W D                    E  +G        +Q +L              +   L++S    +  D  R G +           ++LLLI+KWGG+LT  G +QA  LG  FR IMYP  G GGLLRLH
Sbjct:  502 DIDAEQLKGIYTLRDVLQRWQLCGINRKVQMKPRAWTD--------------------EDLSGPATPVPIERQARLE-------------SLTNLNASP---KASDKDRCGRI-----------SQLLLIVKWGGDLTHSGIQQAETLGQHFRQIMYP-GGDGGLLRLH 622          
BLAST of mRNA_H-elongata_contig90029.16492.1 vs. uniprot
Match: A0A7S2Y5P3_9STRA (Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y5P3_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 9.850e-13
Identity = 50/161 (31.06%), Postives = 66/161 (40.99%), Query Frame = 1
Query:   31 KLHQIKHVLERWEISGINRKLQLKPRRWEDIGAEGDLGHGGHGKDGHANGEGRAGTEAEGVSPQQPQLSVGSGVGDGIGAMGTKAELSSSVGGEQPGDHHRGGMVGGHGGGRGERATELLLILKWGGELTKLGQRQAIELGNSFRTIMYPDAGTGGLLRLH 513
            +L  ++ +LERW+I G+NRKLQ+KPR WE+                                P+  ++                                              R TE+ LILKWGG LTKLG++QAI LG+  R  MYPDA  GG+LRLH
Sbjct:  503 QLMHMRDILERWKIHGLNRKLQIKPRCWEE------------------------------EDPETGEMK--------------------------------------------RRCTEVQLILKWGGNLTKLGEKQAIALGHRHRHEMYPDAPGGGILRLH 589          
BLAST of mRNA_H-elongata_contig90029.16492.1 vs. uniprot
Match: A0A485KUY4_9STRA (Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KUY4_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.330e-12
Identity = 55/169 (32.54%), Postives = 73/169 (43.20%), Query Frame = 1
Query:    7 DVDAETFGKLHQIKHVLERWEISGINRKLQLKPRRWEDIGAEGDLGHGGHGKDGHANGEGRAGTEAEGVSPQQPQLSVGSGVGDGIGAMGTKAELSSSVGGEQPGDHHRGGMVGGHGGGRGERATELLLILKWGGELTKLGQRQAIELGNSFRTIMYPDAGTGGLLRLH 513
            D+D E    ++ ++ VLERW++ GINRK+Q+KPR W +                            EG    +P   V               + S +  G   G                 R T+LL+I+KWGG+LT  G +QA  LG  FR IMYP  G GGLLRLH
Sbjct:  506 DLDQEQMKGVYTLRDVLERWQLCGINRKVQMKPRAWRE----------------------------EGDDDARPLDDVD--------------DESLAKSGSPKG-----------------RVTQLLVIIKWGGDLTHSGIQQAETLGQHFRQIMYP-GGDGGLLRLH 614          
BLAST of mRNA_H-elongata_contig90029.16492.1 vs. uniprot
Match: A0A6G0XXY4_9STRA (Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XXY4_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 1.800e-12
Identity = 55/174 (31.61%), Postives = 73/174 (41.95%), Query Frame = 1
Query:    1 MTDVDAETFGKLHQIKHVLERWEISGINRKLQLKPRRW---EDIGAEGDLGHGGHGKDGHANGEGRAGTEAEGVSPQQPQLSVGSGVGDGIGAMGTKAELSSSVGGEQPGDHHRGGMVGGHGGGRGERATELLLILKWGGELTKLGQRQAIELGNSFRTIMYPDAGTGGLLRLH 513
            M D D E    +  ++ VLERW++ GINRK+Q+KPR W   +D+ +EG                     + +     + Q  VG                                           R T+LL+I+KWGG+LT  G +QA  LG  FR IMYP  G GGLLRLH
Sbjct:  424 MDDPDKEKLKGVCTLRDVLERWQLCGINRKVQMKPRGWSTDDDVSSEG---------------------KGDDDDESKAQEKVG-------------------------------------------RVTQLLVIVKWGGDLTHSGIQQAETLGQHFRQIMYP-GGDGGLLRLH 532          
BLAST of mRNA_H-elongata_contig90029.16492.1 vs. uniprot
Match: A0A7S1UZH4_9STRA (Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase n=3 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S1UZH4_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 2.510e-12
Identity = 51/161 (31.68%), Postives = 67/161 (41.61%), Query Frame = 1
Query:   31 KLHQIKHVLERWEISGINRKLQLKPRRWEDIGAEGDLGHGGHGKDGHANGEGRAGTEAEGVSPQQPQLSVGSGVGDGIGAMGTKAELSSSVGGEQPGDHHRGGMVGGHGGGRGERATELLLILKWGGELTKLGQRQAIELGNSFRTIMYPDAGTGGLLRLH 513
            KL  ++ VLERW+ISG+NRKLQ+KPR+ E+                               S Q  + ++                                            R TE+ LILKWGG LTKLG++Q+I LG   R  +YPDA  GG+LRLH
Sbjct:  653 KLLHMRDVLERWKISGLNRKLQIKPRKTEEC------------------------------SDQNGETTL--------------------------------------------RCTEVQLILKWGGNLTKLGEKQSIHLGQRLRHDLYPDAPGGGILRLH 739          
BLAST of mRNA_H-elongata_contig90029.16492.1 vs. uniprot
Match: B8BVL8_THAPS (Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVL8_THAPS)

HSP 1 Score: 73.9 bits (180), Expect = 3.270e-12
Identity = 46/165 (27.88%), Postives = 67/165 (40.61%), Query Frame = 1
Query:   19 ETFGKLHQIKHVLERWEISGINRKLQLKPRRWEDIGAEGDLGHGGHGKDGHANGEGRAGTEAEGVSPQQPQLSVGSGVGDGIGAMGTKAELSSSVGGEQPGDHHRGGMVGGHGGGRGERATELLLILKWGGELTKLGQRQAIELGNSFRTIMYPDAGTGGLLRLH 513
            E   K   I+ +L RW+ SG+NRKLQ+KPR+W                                +  + P                                           G +  + +EL +I+KWGG+LTKLG++QA+ LGN  R  +YP++G GG+LRLH
Sbjct:  430 EELYKARHIRDILLRWKFSGLNRKLQMKPRKW--------------------------------IEEETPD------------------------------------------GNKVTKCSELQMIIKWGGDLTKLGEKQAVNLGNRLRNELYPESGGGGILRLH 520          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig90029.16492.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G115_ECTSI1.140e-3552.20Inositol hexakisphosphate and diphosphoinositol-pe... [more]
A0A6H5L774_9PHAE6.350e-3451.10Inositol hexakisphosphate and diphosphoinositol-pe... [more]
A0A835YTL2_9STRA8.140e-2138.92Inositol hexakisphosphate and diphosphoinositol-pe... [more]
A0A482S0U0_9ARCH7.170e-1537.65Diphosphoinositol-pentakisphosphate kinase n=1 Tax... [more]
A0A1V9ZSC9_9STRA6.140e-1433.73Inositol hexakisphosphate and diphosphoinositol-pe... [more]
A0A7S2Y5P3_9STRA9.850e-1331.06Inositol hexakisphosphate and diphosphoinositol-pe... [more]
A0A485KUY4_9STRA1.330e-1232.54Inositol hexakisphosphate and diphosphoinositol-pe... [more]
A0A6G0XXY4_9STRA1.800e-1231.61Inositol hexakisphosphate and diphosphoinositol-pe... [more]
A0A7S1UZH4_9STRA2.510e-1231.68Inositol hexakisphosphate and diphosphoinositol-pe... [more]
B8BVL8_THAPS3.270e-1227.88Inositol hexakisphosphate and diphosphoinositol-pe... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig90029contigH-elongata_contig90029:781..1293 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score145.2
Seed ortholog evalue2.8e-32
Seed eggNOG ortholog2880.D7G115
KEGG rclassRC00002
KEGG koko:K13024
KEGG ReactionR05799,R08964
KEGG Pathwayko04070,map04070
EggNOG free text desc.diphosphoinositol-pentakisphosphate kinase activity
EggNOG OGsKOG1057@1,KOG1057@2759
EC2.7.4.24
COG Functional cat.KLT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Exons1
Model size513
Cds size513
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931300.510999-CDS-H-elongata_contig90029:780..12931622931300.510999-CDS-H-elongata_contig90029:780..1293Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig90029 781..1293 -
1691679779.718205-CDS-H-elongata_contig90029:780..12931691679779.718205-CDS-H-elongata_contig90029:780..1293Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig90029 781..1293 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig90029.16492.1prot_H-elongata_contig90029.16492.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig90029 781..1293 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig90029.16492.1

>prot_H-elongata_contig90029.16492.1 ID=prot_H-elongata_contig90029.16492.1|Name=mRNA_H-elongata_contig90029.16492.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=171bp
MTDVDAETFGKLHQIKHVLERWEISGINRKLQLKPRRWEDIGAEGDLGHG
GHGKDGHANGEGRAGTEAEGVSPQQPQLSVGSGVGDGIGAMGTKAELSSS
VGGEQPGDHHRGGMVGGHGGGRGERATELLLILKWGGELTKLGQRQAIEL
GNSFRTIMYPDAGTGGLLRLH
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mRNA from alignment at H-elongata_contig90029:781..1293-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig90029.16492.1 ID=mRNA_H-elongata_contig90029.16492.1|Name=mRNA_H-elongata_contig90029.16492.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=513bp|location=Sequence derived from alignment at H-elongata_contig90029:781..1293- (Himanthalia elongata Himel1 dioecious)
ATGACGGACGTGGACGCCGAGACGTTCGGCAAGCTCCACCAGATCAAGCA CGTCCTAGAGCGCTGGGAAATTTCGGGCATCAACCGAAAGCTCCAGCTGA AGCCTCGCCGGTGGGAAGACATCGGTGCGGAAGGCGATCTAGGGCATGGC GGCCACGGCAAGGATGGCCACGCGAACGGTGAAGGGCGGGCGGGGACAGA GGCCGAGGGAGTCTCACCGCAGCAACCGCAGCTGTCTGTCGGTTCGGGGG TAGGCGACGGTATTGGGGCGATGGGGACCAAGGCCGAGCTCTCGTCGTCG GTCGGAGGGGAACAACCAGGGGATCATCACAGGGGAGGCATGGTTGGGGG ACATGGCGGTGGCAGGGGGGAGAGGGCGACTGAGCTGCTGCTGATTCTCA AGTGGGGTGGAGAGCTGACGAAGCTCGGGCAACGGCAAGCGATCGAGCTC GGGAACAGCTTCAGGACTATCATGTACCCGGACGCGGGGACGGGGGGACT GCTCCGGCTTCAC
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Coding sequence (CDS) from alignment at H-elongata_contig90029:781..1293-

>mRNA_H-elongata_contig90029.16492.1 ID=mRNA_H-elongata_contig90029.16492.1|Name=mRNA_H-elongata_contig90029.16492.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1026bp|location=Sequence derived from alignment at H-elongata_contig90029:781..1293- (Himanthalia elongata Himel1 dioecious)
ATGACGGACGTGGACGCCGAGACGTTCGGCAAGCTCCACCAGATCAAGCA
CGTCCTAGAGCGCTGGGAAATTTCGGGCATCAACCGAAAGCTCCAGCTGA
AGCCTCGCCGGTGGGAAGACATCGGTGCGGAAGGCGATCTAGGGCATGGC
GGCCACGGCAAGGATGGCCACGCGAACGGTGAAGGGCGGGCGGGGACAGA
GGCCGAGGGAGTCTCACCGCAGCAACCGCAGCTGTCTGTCGGTTCGGGGG
TAGGCGACGGTATTGGGGCGATGGGGACCAAGGCCGAGCTCTCGTCGTCG
GTCGGAGGGGAACAACCAGGGGATCATCACAGGGGAGGCATGGTTGGGGG
ACATGGCGGTGGCAGGGGGGAGAGGGCGACTGAGCTGCTGCTGATTCTCA
AGTGGGGTGGAGAGCTGACGAAGCTCGGGCAACGGCAAGCGATCGAGCTC
GGGAACAGCTTCAGGACTATCATGTACCCGGACGCGGGGACGGGGGGACT
GCTCCGGCTTCACATGACGGACGTGGACGCCGAGACGTTCGGCAAGCTCC
ACCAGATCAAGCACGTCCTAGAGCGCTGGGAAATTTCGGGCATCAACCGA
AAGCTCCAGCTGAAGCCTCGCCGGTGGGAAGACATCGGTGCGGAAGGCGA
TCTAGGGCATGGCGGCCACGGCAAGGATGGCCACGCGAACGGTGAAGGGC
GGGCGGGGACAGAGGCCGAGGGAGTCTCACCGCAGCAACCGCAGCTGTCT
GTCGGTTCGGGGGTAGGCGACGGTATTGGGGCGATGGGGACCAAGGCCGA
GCTCTCGTCGTCGGTCGGAGGGGAACAACCAGGGGATCATCACAGGGGAG
GCATGGTTGGGGGACATGGCGGTGGCAGGGGGGAGAGGGCGACTGAGCTG
CTGCTGATTCTCAAGTGGGGTGGAGAGCTGACGAAGCTCGGGCAACGGCA
AGCGATCGAGCTCGGGAACAGCTTCAGGACTATCATGTACCCGGACGCGG
GGACGGGGGGACTGCTCCGGCTTCAC
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