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Homology
BLAST of mRNA_H-elongata_contig12153.1649.1 vs. uniprot
Match: D8LU94_ECTSI (Coronin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU94_ECTSI) HSP 1 Score: 677 bits (1746), Expect = 3.320e-238 Identity = 372/444 (83.78%), Postives = 409/444 (92.12%), Query Frame = 1
Query: 4 SRSRHAY--SPQTEQTWTGIPVATTQGEQSYIKGNTKYMAVAVQGGGGPFAVLPYNKPGRYGRGGPLVAGHTASVLDFDFNPFHEQLMASCSEDCSVKVWGIPDEGFTKTETEALIDLTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEAGMNMNTLSGHEQLIQDIVWDYYGNTYATSCKDKTIRIVDARSPKVAQASSVPMAHEGARSSKLTFLGTKEKLLSVGFTKQSQRQFKIWDPRNLAKAIKKLDIDQAAGVILPFYDNESSLLYLAGKGDGNIRYYECVDEQPFCFAISEYRSTTAAKGMAMIPKRGCHVMKCETARLLKLTSNSIEPLSFVVPRKSDAFQDDLFPPCPSGQASHSADEWLRGSEKAPMKMDMRPKQVSNSTDPAMAARKK----KAFAPLKSSKDLQKELEAAMTRISLLESVIKDHGLRVP 1317
S+ RH Y SP+ E WTGIPVATTQGEQSYIKGNTKYMAVAVQGGGGPFAVLPYNKPGR+ RGGPLV+GHTASVLDFDFNPFHEQL+ASCSEDC+VKVWGIP++GFT+TETEALIDL G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEAGMN+NTLS HEQLIQDIVWD+YGNTYATSCKDK++RI+DARSP+VAQ SV MAHEGARSSK+T+LGTKEKL+SVGFTKQSQRQFK+WDPRNL+K IKK++IDQAAGVILPFYD+ESSLLYLAGKGDGNIRYYECVDE P+CFAISE+RSTTAAKGMAMIPKRG +VMKCETARLLKLTSNSIEPLSFVVPRKSDAFQDDLFPPC SGQASH+A+EW++GSEKAPMKMDMRP+ + S DP A KAFAPLKSSKD+QK+L+AAM R++LLE VIKD GLRVP
Sbjct: 8 SKYRHVYVESPKAEACWTGIPVATTQGEQSYIKGNTKYMAVAVQGGGGPFAVLPYNKPGRFVRGGPLVSGHTASVLDFDFNPFHEQLVASCSEDCTVKVWGIPEDGFTETETEALIDLQGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEAGMNINTLSAHEQLIQDIVWDFYGNTYATSCKDKSLRIIDARSPQVAQ--SVAMAHEGARSSKITYLGTKEKLVSVGFTKQSQRQFKVWDPRNLSKEIKKMEIDQAAGVILPFYDDESSLLYLAGKGDGNIRYYECVDENPWCFAISEFRSTTAAKGMAMIPKRGLNVMKCETARLLKLTSNSIEPLSFVVPRKSDAFQDDLFPPCFSGQASHTAEEWVKGSEKAPMKMDMRPRNLGVSLDPVAAXXXXXXXXKAFAPLKSSKDMQKDLDAAMARVALLEKVIKDAGLRVP 449
BLAST of mRNA_H-elongata_contig12153.1649.1 vs. uniprot
Match: A0A835YLY0_9STRA (Coronin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLY0_9STRA) HSP 1 Score: 539 bits (1389), Expect = 4.710e-184 Identity = 303/449 (67.48%), Postives = 365/449 (81.29%), Query Frame = 1
Query: 4 SRSRHAY--SPQTEQTWTGIPVATTQGEQSYIKGNTKYMAVAVQGGGGPFAVLPYNKPGRYGRGGPLVAGHTASVLDFDFNPFHEQLMASCSEDCSVKVWGIPDEGFTKTETEALIDLTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEAGMNMNTLSGHEQLIQDIVWDYYGNTYATSCKDKTIRIVDARSPKVAQASSVPMAHEGARSSKLTFLGTKEKLLSVGFTKQSQRQFKIWDPRNLAKAIKKLDIDQAAGVILPFYDNESSLLYLAGKGDGNIRYYECVDEQPFCFAISEYRSTTAAKGMAMIPKRGCHVMKCETARLLKLTSNSIEPLSFVVPRKSDAFQDDLFPPCPSGQASHSADEWLRGSEKAPMKMDMRP-------KQVSNSTDPAMAARKK--KAFAPLKSSKDLQKELEAAMTRISLLESVIKDHGLRVP 1317
S+ RH Y +P+ E T+T IP ++T GEQ+YIKGNTKY AVAVQGGGGPF +LPY+KPGR+ R P++AGHT +VLDFDFNPFHEQL+ASCSEDC++K+WGIPD G T+T TE+L+DL G XXXXXXXXXXXXXXXXXXXXXXXXXXXXDIE +N L GHE LIQDIVWDY G YAT+CKDK++RI DAR+ V+ +P AHEGARS+KLT+LG+K+KLLSVGFT+QSQRQFKIWDPRN + IKK+DIDQAAGVI+PFYD++++LLYLAGKGDGNIRYYE VDE PFCFAISEYRST AAKGMAM+PKRG ++M+CETARLLKLT++S+EPLSF+VPRKSDAFQDDLFPP SG AS SAD+WL G ++ P+ +D+RP + S PA+ +K + A ++ L+ EL AA+ RI LLE VIKD+GLRVP
Sbjct: 8 SKYRHVYVDAPKVESTFTNIPTSSTSGEQNYIKGNTKYAAVAVQGGGGPFTILPYDKPGRFERNVPVIAGHTGAVLDFDFNPFHEQLVASCSEDCTIKIWGIPDGGVTETITESLVDLGGHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEKACEVNCLGGHEGLIQDIVWDYMGANYATTCKDKSMRICDARAATVSTV--IPNAHEGARSTKLTYLGSKDKLLSVGFTRQSQRQFKIWDPRNTSAEIKKVDIDQAAGVIMPFYDDDTNLLYLAGKGDGNIRYYEFVDENPFCFAISEYRSTVAAKGMAMVPKRGLNIMQCETARLLKLTTSSVEPLSFMVPRKSDAFQDDLFPPTQSGTASLSADQWLSGIDRPPVLLDLRPGAKAPVAPSIIGSAAPAIGLKKAAPSSAASTVTAPVLESELSAALARILLLEKVIKDNGLRVP 454
BLAST of mRNA_H-elongata_contig12153.1649.1 vs. uniprot
Match: A0A836CNW2_9STRA (Coronin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNW2_9STRA) HSP 1 Score: 521 bits (1341), Expect = 1.330e-176 Identity = 304/462 (65.80%), Postives = 361/462 (78.14%), Query Frame = 1
Query: 4 SRSRHAY--SPQTEQTWTGIPVATTQGEQSYIKGNTKYMAVAVQGGGGPFAVLPYNKPGRYGRGGPLVAGHTASVLDFDFNPFHEQLMASCSEDCSVKVWGIPDEGFTKTETEALIDLTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEAGMNMNTLSGHEQLIQDIVWDYYGNTYATSCKDKTIRIVDARSPKVAQASSVPMAHEGARSSKLTFLGTKEKLLSVGFTKQSQRQFKIWDPRNLAKAIKKLDIDQAAGVILPFYDNESSLLYLAGKGDGNIRYYECVDEQPFCFAISEYRSTTAAKGMAMIPKRGCHVMKCETARLLKLTSNSIEPLSFVVPRKSDAFQDDLFPPCPSGQASHSADEWLRGSEKAPMKMDMRP---KQVSNSTDPAMAARK---KKAFAPLKS----------------SKDLQKELEAAMTRISLLESVIKDHGLRVP 1317
S+ RH Y P+ E T++ IP ++T GEQ+YIKGNTKY AVAVQGGGGPF +L Y KPGR+ R PL+AGHT++VLDFDFNPF E L+ASCSEDC++KVWGIP+ G T+T TE L+DL+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IE + +NTL+ H+QLIQDIVWDY G YAT+CKDK++RI DAR+ KV+ +P AHEGARS+KLT+LG K+KLLSVGFT+QSQRQFKIWDPRN A IK++DIDQAAGVI+PFYD+++ LLYLAGKGDGNIRYYE VDE P+CFAISEYRSTTAAKGMAM+PKRG VM+CETARLLKLT++S+EPLSFVVPRKSDAFQDDLFPP SG S +AD+WL G+ K P+ MD+ P + VS S + A K P S + +L+ EL AA+ RI LLE VIKD+GLRVP
Sbjct: 8 SKYRHVYVEPPKIEGTFSNIPTSSTSGEQNYIKGNTKYAAVAVQGGGGPFVILDYTKPGRFERNVPLIAGHTSAVLDFDFNPFFENLVASCSEDCTIKVWGIPEGGLTETITEPLVDLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEKSVEINTLAAHDQLIQDIVWDYTGANYATTCKDKSVRICDARAAKVSTV--IPNAHEGARSAKLTYLGAKDKLLSVGFTRQSQRQFKIWDPRNTAAEIKRIDIDQAAGVIMPFYDDDTQLLYLAGKGDGNIRYYEFVDENPWCFAISEYRSTTAAKGMAMVPKRGLDVMRCETARLLKLTTSSVEPLSFVVPRKSDAFQDDLFPPAFSGTPSLTADQWLAGANKPPVTMDLNPAAKRPVSQSLGGGLGATPFGAAKTATPASSRPASGIAAAVAASGKPTTELETELNAALARILLLEQVIKDNGLRVP 467
BLAST of mRNA_H-elongata_contig12153.1649.1 vs. uniprot
Match: F0Y2I0_AURAN (Coronin n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2I0_AURAN) HSP 1 Score: 438 bits (1126), Expect = 1.770e-144 Identity = 256/446 (57.40%), Postives = 320/446 (71.75%), Query Frame = 1
Query: 1 SSRSRHAY--SPQTEQTWTGIPVATTQGEQSYIKGNTKYMAVAVQGGGGPFAVLPYNKPGRYGRGGPLVAGHTASVLDFDFNPFHEQLMASCSEDCSVKVWGIPDEGFTKTETEALIDLTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEAGMNMNTLSGHEQLIQDIVWDYYGNTYATSCKDKTIRIVDARSPKVAQASSVPMAHEGARSSKLTFLGT----KEKLLSVGFTKQSQRQFKIWDPRNLAKAIKKLDIDQAAGVILPFYDNESSLLYLAGKGDGNIRYYECVDEQPFCFAISEYRSTTAAKGMAMIPKRGCHVMKCETARLLKLTSNS----IEPLSFVVPRKSDAFQDDLFPPCPSGQASHSADEWLRGSEKAPMKMDMRPKQVSNSTDPAMAARKKKAFAPLKSSKDLQKELEAAMTRISLLESVIKDHGL 1308
SS RH + P+ E T+ G +AT GEQ YIKGNTK+ AVA+QGGGGPFAV+PY K G++ G P+VAGH ++VLDFDFNPFHE ++AS SED ++KVWGIP +G T+T TE L+DL G XXXXXXXXXXXXXXXXXXXXXXXDIE G ++ + HEQLIQD+VWDY G +AT+CKDK +R+ D R+ VA +P AH GA+S K+TFLG + + +VGFTKQSQRQ K+WD R+L+K + K+D+DQAAGVI+P+YD ++ +LYL GKGDGNIRYYE ++PF FA+SEYRST AAKG +PKRG +VM CETAR LKLTS + +EPLSF+VPRKSDAFQDD+FP SG S +ADEWL G K P+ M + P P A K AF P+K+ LQKE++ RI+LLE+ +K GL
Sbjct: 7 SSHYRHVFVDPPKVENTYKGFRLATVTGEQQYIKGNTKFFAVALQGGGGPFAVVPYGKKGQFAPGTPVVAGHKSAVLDFDFNPFHEHIIASASEDSTIKVWGIPPDGLTETITEPLVDLHGHGRKVTLXXXXXXXXXXXXXXXXXXXXXXXDIEKGCEVSGMPAHEQLIQDLVWDYEGKMWATTCKDKKVRLGDPRAGAVAM--ELPEAHAGAKSVKMTFLGDTGRFQRRFATVGFTKQSQRQIKVWDVRDLSKMVHKVDLDQAAGVIVPYYDCDTKVLYLCGKGDGNIRYYEMSKDKPFAFALSEYRSTQAAKGSCFLPKRGLNVMACETARCLKLTSQNGNGIVEPLSFIVPRKSDAFQDDIFPDTFSGHPSCTADEWLSGVTKTPLMMSLNPDSAG--AKPTGGATK--AFVPMKTPAALQKEIDEKDKRIALLEARLKAAGL 446
BLAST of mRNA_H-elongata_contig12153.1649.1 vs. uniprot
Match: A0A7S3H1X9_9STRA (Coronin n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H1X9_9STRA) HSP 1 Score: 432 bits (1112), Expect = 1.840e-142 Identity = 257/439 (58.54%), Postives = 331/439 (75.40%), Query Frame = 1
Query: 1 SSRSRHAYS--PQTEQTWTGIPVATTQGEQSYIKGNTKYMAVAVQGGGGPFAVLPYNKPGRYGRGGPLVAGHTASVLDFDFNPFHEQLMASCSEDCSVKVWGIPDEGFTKTETEALIDLTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEAGMNMNTLSG-HEQLIQDIVWDYYGNTYATSCKDKTIRIVDARSPKVAQASSVPMAHEGARSSKLTFLGTKEKLLSVGFTKQSQRQFKIWDPRNLAKAIKKLDIDQAAGVILPFYDNESSLLYLAGKGDGNIRYYECVDEQPFCFAISEYRSTTAAKGMAMIPKRGCHVMKCETARLLKLTSNSIEPLSFVVPRKSDAFQDDLFPPCPSGQASHSADEWLRGSEKAPMKMDMRPKQVSNSTDPAMAARKKKAFAPLKSSKDLQKELEAAMTRISLLESVIKDHGL 1308
SS+ RH + P+ + +T + ++T GEQ+YIK N KY AVA+ GGGGP V+ +KPGR P+++GH+A+VLDF+FNPF++Q++A+ SED +VKVWGIP+ G T T L+DLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G+ +N+LS H+QLIQDIVWDY G YATSCKDK IRI+DARS V +S++ AHEGA+S KLT+ GT KL+SVGFT+QSQRQFKIWDPRN AK ++K+DIDQAAGVI+PFYD +++LLYLAGKGDGN+RYYE E P + +S++RS+ +AKGMA +PKRG VM CE+ARL+KLT+NS+EPLSF VPRKSD+FQDD++P S A+H+ADEWL GS+K P+ M + P ++ A + +KK F K++ LQ EL+ A RI LE+ + GL
Sbjct: 7 SSKFRHVFCDPPRVDAQFTNLRLSTVTGEQNYIKANPKYFAVALSGGGGPITVINLDKPGRMLTDQPVISGHSAAVLDFEFNPFNDQIIATGSEDTTVKVWGIPEGGLTANITTPLVDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGVEINSLSSAHDQLIQDIVWDYTGTEYATSCKDKNIRIIDARSAAV--SSTIEQAHEGAKSMKLTYAGTTGKLISVGFTRQSQRQFKIWDPRNTAKELEKVDIDQAAGVIMPFYDADTNLLYLAGKGDGNVRYYEISSEAPHVYPLSDFRSSVSAKGMAWVPKRGLDVMACESARLMKLTTNSVEPLSFFVPRKSDSFQDDIYPDTASYTAAHTADEWLAGSDKPPVLMSLNPALRGSAV--AASVSEKKVFVAAKTAAQLQIELDQANARIKDLEARLAAAGL 441
BLAST of mRNA_H-elongata_contig12153.1649.1 vs. uniprot
Match: A0A7R9YBR7_9STRA (Coronin (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBR7_9STRA) HSP 1 Score: 422 bits (1085), Expect = 8.110e-139 Identity = 216/417 (51.80%), Postives = 285/417 (68.35%), Query Frame = 1
Query: 4 SRSRHAYSP---QTEQTWTGIPVATTQGEQSYIKGNTKYMAVAVQGGGGPFAVLPYNKPGRYGRGGPLVAGHTASVLDFDFNPFHEQLMASCSEDCSVKVWGIPDEGFTKTET--EALIDLTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEAGMNMNTLSGHEQLIQDIVWDYYGNTYATSCKDKTIRIVDARSPKVAQASSVPMAHEGARSSKLTFLGTKEKLLSVGFTKQSQRQFKIWDPRNLAKAIKKLDIDQAAGVILPFYDNESSLLYLAGKGDGNIRYYECVDEQPFCFAISEYRSTTAAKGMAMIPKRGCHVMKCETARLLKLTSNSIEPLSFVVPRKSDAFQDDLFPPCPSGQASHSADEWLRGSEKAPMKMDMRPKQVSNSTDPAMAARKKKAFAPLKSSKDL 1239
S+ RH Y E W G +AT GEQ+YIKG+TK+ A+A+ GGGGPFAV N GRY P+++GH ++VLDF+F+PF+ L+AS S+D ++K+WGIPDEG ++T T +AL DLT D+E ++T + + LIQDIVWDY G+ YA SCKDK IRIVD R+ A+ ++ AHEGA+S KLT+LG K+KL++VGFT+QSQRQFKIWDPRN ++A+K++DIDQ+AGVI+PFYD ++ LLYLAGKGDGNIRYYE DE PF ++ISEYRST + KGM M+PKR C VM+CETAR LKLTSNS+ PLSF+VPRKSDAFQ+DL+P +G SH+A +W+ GS+K P+ M+P + A+ K + F P K++ L
Sbjct: 8 SKFRHVYCEPPKNAEDEWQGFRLATATGEQTYIKGSTKFFALALSGGGGPFAVCDVNSTGRYDPDAPIISGHRSAVLDFEFSPFNPNLLASASDDSTIKLWGIPDEGLSQTLTSDDALADLTAHGRKVTLLRFHPTANNVLASASADFTTKVWDVEHSSEISTFAECQALIQDIVWDYMGSNYAVSCKDKLIRIVDGRT---AECTASFQAHEGAKSCKLTYLGQKDKLVTVGFTRQSQRQFKIWDPRNTSEALKRVDIDQSAGVIMPFYDPDTCLLYLAGKGDGNIRYYEMSDENPFSYSISEYRSTQSQKGMCMLPKRACDVMRCETARFLKLTSNSVMPLSFIVPRKSDAFQEDLYPDSFAGVPSHAAADWIEGSDKVPIMATMKPGATPS------ASNKTETFVPKKNAMQL 415
BLAST of mRNA_H-elongata_contig12153.1649.1 vs. uniprot
Match: A0A7S3XP63_HETAK (Coronin n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XP63_HETAK) HSP 1 Score: 419 bits (1076), Expect = 1.040e-136 Identity = 247/426 (57.98%), Postives = 316/426 (74.18%), Query Frame = 1
Query: 37 EQTWTGIPVATTQGEQSYIKGNTKYMAVAVQGGGGPFAVLPYNKPGRYGRGGPLVAGHTASVLDFDFNPFHEQLMASCSEDCSVKVWGIPDEGFTKTETEALIDLTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEAGMNMNTL-SGHEQLIQDIVWDYYGNTYATSCKDKTIRIVDARSPKVAQASSVPMAHEGARSSKLTFLGTKEKLLSVGFTKQSQRQFKIWDPRNLAKAIKKLDIDQAAGVILPFYDNESSLLYLAGKGDGNIRYYECVDEQPFCFAISEYRSTTAAKGMAMIPKRGCHVMKCETARLLKLTSNSIEPLSFVVPRKSDAFQDDLFPPCPSGQASHSADEWLRGSEKAPMKMDMRPKQVSNSTD-PAMAARKKKAFAPLKSSKDLQKELEAAMTRISLLESVIKDHGL 1308
+ T+T + + T GEQ YIK NTK+ AVA+QGGGGP AVL ++ ++ + P++ GH ++VLDFDFNPFHE ++A+ SED +VKVWGIP+EG T T T+ L+DL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX E + + + H L+ + WD+ G TSCKDKT+R++DAR+ V A+ +P AH G +S KL F+G K KL SVGFT+Q+ RQ KIWDP NL+ +K +DID A+GV+LPFYD +SSLLYLAGKGDGNIRY+E VDE PFC I+E+R+TTAAKGM +PKRG VM+CETARLLKLTS+S+EPLSF+VPRKSDAFQ+DLFPP +G+A+H+ADEWL GS P+ M + P Q + + + AA AFAP K LQ EL+ A+ RI +LE +++ GL
Sbjct: 41 QNTFTSLRITTAAGEQQYIKANTKFFAVALQGGGGPVAVLAHDAYAKFDQNPPILGGHRSAVLDFDFNPFHEHIIATGSEDLTVKVWGIPEEGLTDTITDPLVDLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKQAELVSCDAAHTNLLHHLAWDHEGGHLYTSCKDKTVRMLDARTGGV--ANQIPEAHPGTKSVKLAFMGNKGKLASVGFTRQAGRQIKIWDPANLSAPLKTVDIDVASGVLLPFYDPDSSLLYLAGKGDGNIRYFEIVDEAPFCIPINEFRTTTAAKGMCAVPKRGLDVMRCETARLLKLTSSSVEPLSFIVPRKSDAFQEDLFPPTFAGRAAHTADEWLAGSTLPPVTMSLDPAQNGTAEERKSAAAAAAPAFAPKKPPAQLQTELDEALARIQVLEQRLREAGL 464
BLAST of mRNA_H-elongata_contig12153.1649.1 vs. uniprot
Match: W7TD57_9STRA (Coronin n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TD57_9STRA) HSP 1 Score: 414 bits (1063), Expect = 7.590e-135 Identity = 219/453 (48.34%), Postives = 290/453 (64.02%), Query Frame = 1
Query: 4 SRSRHAY--SPQTEQTWTGIPVATTQGEQSYIKGNTKYMAVAVQGGGGPFAVLPYNKPGRYGRGGPLVAGHTASVLDFDFNPFHEQLMASCSEDCSVKVWGIPDEGFTKTETEALIDLTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEAGMNMNTLSGHEQLIQDIVWDYYGNTYATSCKDKTIRIVDARSPKVAQASSVPMAHEGARSSKLTFLGTKEKLLSVGFTKQSQRQFKIWDPRNLAKAIKKLDIDQAAGVILPFYDNESSLLYLAGKGDGNIRYYECVDEQPFCFAISEYRSTTAAKGMAMIPKRGCHVMKCETARLLKLTSNSIEPLSFVVPRKSDAFQDDLFPPCPSGQASHSADEWLRGSEKAPMKMDMRPKQVSNSTDPAMAARKKKAFAPLKSSK----------------DLQKELEAAMTRISLLESVIKDHGL 1308
S+ RH Y P+T + ++ I ++T GEQ+YIK N KY AVA+ GGGGPF +P+ G P+ +GHT++VLDFDF+PFH+ L+AS +ED +VKVWGIP+ G ++ E L+DL D+E G H+QL+QD+ WDY GNT+AT+CKDK +R++D R+ ++ AHEG++SSK FLG +E LL+VGFTKQS+RQ KIWD +NL + +K LDIDQAAG I+PF+D++++LLYLAGKGDGNIRYYE V E PF F ISEYRSTT +KG ++PKRG +V++CETAR+LKLT++S+EPLSF+VPRK FQDDLFPP +G SHSA EW GS+KAP+ M + P + + +PL SS LQKEL+ A+ RISLLES +K GL
Sbjct: 8 SKYRHVYVQPPKTGEAYSNIRLSTAVGEQNYIKANPKYFAVALSGGGGPFTCIPFEAIGALPAAPPVFSGHTSNVLDFDFSPFHDHLIASGAEDTTVKVWGIPEGGLKESIAEPLVDLRAHERKVTLLRFHPTAANVLASVSADGMIKLWDVEGGQEGGQCHVHQQLVQDVQWDYRGNTFATTCKDKVLRVLDGRTGRLGLERKD--AHEGSKSSKCVFLGDREMLLTVGFTKQSRRQLKIWDLKNLKQEVKTLDIDQAAGAIMPFFDSDTNLLYLAGKGDGNIRYYEIVSEAPFVFPISEYRSTTPSKGCCLVPKRGLNVLRCETARVLKLTTSSVEPLSFIVPRKGGFFQDDLFPPSMAGLPSHSAPEWWAGSDKAPLLMSLDPAVREGGKEGGKDMGWRGVGSPLGSSGGSLGNRPPSGGGRTTGQLQKELDVALARISLLESRLKAAGL 458
BLAST of mRNA_H-elongata_contig12153.1649.1 vs. uniprot
Match: A0A7S2XV61_9STRA (Coronin n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV61_9STRA) HSP 1 Score: 412 bits (1058), Expect = 2.680e-134 Identity = 231/425 (54.35%), Postives = 313/425 (73.65%), Query Frame = 1
Query: 37 EQTWTGIPVATTQGEQSYIKGNTKYMAVAVQGGGGPFAVLPYNKPGRYGRGGPLVAGHTASVLDFDFNPFHEQLMASCSEDCSVKVWGIPDEGFTKTETEALIDLTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEAGMNMNTLSG-HEQLIQDIVWDYYGNTYATSCKDKTIRIVDARSPKVAQASSVPMAHEGARSSKLTFLGTKEKLLSVGFTKQSQRQFKIWDPRNLAKAIKKLDIDQAAGVILPFYDNESSLLYLAGKGDGNIRYYECVDEQPFCFAISEYRSTTAAKGMAMIPKRGCHVMKCETARLLKLTSNSIEPLSFVVPRKSDAFQDDLFPPCPSGQASHSADEWLRGSEKAPMKMDMRPKQVSNSTDPAMAARKKKAFAPLKSSKDLQKELEAAMTRISLLESVIKDHGL 1308
+ T+T + ++T GE +YIKGNTK+ AV++QGGGGP AV+PY GRY + P+++GH +VLDF+FNPFHEQ++A+ SED ++KVWGIP+ G T+T + L+D+ G XXXXXXXXXXXXXXXXXXXXXXXXXXX E G + ++ H LI DIVWDY G +Y TSCKDKT+R DARS +V +P AHEG +S+K+ LG +L ++GFT+QS RQ KIWD RN+ +K L+ID+A GV++PFYD +S LL++AGKGDGNIRY+E V+E PF +AI+E+R+ AAKGM M+PK G +V K ETARLLK+TS+++EPLSF+VPRKSDAFQ+DLFP G + SADEW+ G ++ P+K + P + AA ++AF P + + ++QKEL+AA+ RI LE+ +++ GL
Sbjct: 21 QNTYTALRISTVTGEHNYIKGNTKFFAVSLQGGGGPVAVIPYTAYGRYDQNPPVISGHRGNVLDFEFNPFHEQIIATGSEDLTIKVWGIPEAGLTETIRDPLVDMHGHGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKGAEITSVQAPHSNLIHDIVWDYLGKSYFTSCKDKTVRCFDARSSEVTM--EIPNAHEGMKSTKMANLGDSGRLATLGFTRQSGRQLKIWDCRNMGAELKTLEIDRAPGVMMPFYDPDSQLLFIAGKGDGNIRYFETVEESPFVYAINEFRTNNAAKGMGMVPKMGLNVSKNETARLLKMTSSTVEPLSFIVPRKSDAFQEDLFPETACGIPALSADEWVAGEDRPPVKGSLNPDLAGGNGPRQAAAATQQAFKPTRPAAEIQKELDAALARIEKLEAQLREAGL 443
BLAST of mRNA_H-elongata_contig12153.1649.1 vs. uniprot
Match: A0A7S3NJE3_9STRA (Coronin n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJE3_9STRA) HSP 1 Score: 409 bits (1051), Expect = 4.940e-133 Identity = 247/453 (54.53%), Postives = 314/453 (69.32%), Query Frame = 1
Query: 4 SRSRHAY--SPQTEQTWTGIPVATTQGEQSYIKGNTKYMAVAVQGGGGPFAVLPYNKPGRYGRGGPLVAGHTASVLDFDFNPFHEQLMASCSEDCSVKVWGIPDEGFTKTETEALIDLTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEAGMNMNTLSGHEQLIQDIVWDYYGNTYATSCKDKTIRIVDARSPKVAQASSVPMAHEGARSSKLTFLGTKEKLLSVGFTKQSQRQFKIWDPRNLAKAIKKLDIDQAAGVILPFYDNESSLLYLAGKGDGNIRYYECVDEQPFC--FAISEYRSTTAAKGMAMIPKRGCHVMKCETARLLKLTSN----SIEPLSFVVPRKSDAFQDDLFPPCPSGQASHSADEWLRGSEKAPMKMDMRPK---QVSNSTDPAMAA-------RKKKAFAPLKSSKDLQKELEAAMTRISLLESVIKDHGL 1308
S+ RH + P+ E+T+TG ++T GEQSYIKGNTK+ A+A+QGGGGP A++ Y G Y G P++ GH +VLD DFNPFHE ++ASCS+D ++K+WGIP EG T+T +E L+DL G XXXXXXXXXXXXXXXXXXXXXXXXXXDIE G + + H LIQDI W+Y G+ YATSCKDK +R+ D R+ P HEGA+S+KL+FLG K + +SVGFT+QSQRQ K+WD R+ +K K+D+DQAAGVI+P+YD ++S+LYL GKGDGNIRYYE E FA+SEYRSTTAAKG + IPKRG +VM CETAR LKL S ++EPLSF+VPRKSDAFQ+D+FPP +G + +ADEWL G+ K P K + P + + DP A KK AF P K+ LQ EL A +I +L ++D GL
Sbjct: 8 SKYRHVFVDPPKKEETYTGFRLSTATGEQSYIKGNTKFFALALQGGGGPVAIVDYKDKGHYKTGAPIIGGHKGAVLDLDFNPFHEHILASCSDDTTIKIWGIPQEGLTETISEPLVDLHGHGRKXXXXXXXXXXXXXXXXXXXXXXXXXXDIEKGCEIFSGETHPDLIQDIAWNYDGSYYATSCKDKIVRVGDPRANTTILELKTP--HEGAKSTKLSFLGDKPQFISVGFTRQSQRQLKMWDIRDTSKPAFKVDLDQAAGVIIPYYDVDTSILYLCGKGDGNIRYYEVNTENKRSPIFALSEYRSTTAAKGCSFIPKRGLNVMACETARCLKLVSQGGQGAVEPLSFIVPRKSDAFQEDIFPPTFNGNPAVTADEWLAGASKFPPKSPLDPSLKGSIGLAADPTNAGGTTNSNNTKKPAFIPAKTPAQLQAELNLANKKIEILTKRLQDAGL 458
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 630.6 |
| Seed ortholog evalue | 5.2e-178 |
| Seed eggNOG ortholog | 2880.D8LU94 |
| Preferred name | CORO2A |
| KEGG ko | ko:K13882,ko:K13886,ko:K13887 |
| KEGG Pathway | ko04145,ko05152,map04145,map05152 |
| GOs | GO:0000147,GO:0000278,GO:0000281,GO:0000910,GO:0001667,GO:0001725,GO:0001755,GO:0001772,GO:0001775,GO:0001776,GO:0001845,GO:0001891,GO:0001894,GO:0001906,GO:0001909,GO:0001932,GO:0001933,GO:0001952,GO:0001953,GO:0002228,GO:0002252,GO:0002260,GO:0002263,GO:0002285,GO:0002323,GO:0002366,GO:0002376,GO:0002443,GO:0002449,GO:0002520,GO:0002521,GO:0002682,GO:0002684,GO:0002694,GO:0002696,GO:0003674,GO:0003779,GO:0003785,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005769,GO:0005826,GO:0005829,GO:0005856,GO:0005884,GO:0005885,GO:0005886,GO:0005901,GO:0005903,GO:0005911,GO:0005937,GO:0005938,GO:0006469,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006887,GO:0006897,GO:0006909,GO:0006928,GO:0006935,GO:0006950,GO:0006952,GO:0006955,GO:0006970,GO:0006972,GO:0006996,GO:0007010,GO:0007015,GO:0007017,GO:0007033,GO:0007040,GO:0007049,GO:0007154,GO:0007155,GO:0007162,GO:0007165,GO:0007166,GO:0007275,GO:0007525,GO:0007527,GO:0008017,GO:0008022,GO:0008064,GO:0008092,GO:0008104,GO:0008150,GO:0008152,GO:0008154,GO:0008284,GO:0008360,GO:0009267,GO:0009605,GO:0009607,GO:0009611,GO:0009617,GO:0009620,GO:0009628,GO:0009719,GO:0009888,GO:0009892,GO:0009986,GO:0009987,GO:0009991,GO:0010033,GO:0010324,GO:0010467,GO:0010522,GO:0010563,GO:0010605,GO:0010631,GO:0010632,GO:0010633,GO:0010638,GO:0010639,GO:0010721,GO:0010762,GO:0010769,GO:0010771,GO:0010810,GO:0010812,GO:0010941,GO:0010959,GO:0012505,GO:0012506,GO:0014031,GO:0014032,GO:0014033,GO:0014070,GO:0014910,GO:0014912,GO:0015629,GO:0015631,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0016328,GO:0016477,GO:0016482,GO:0016600,GO:0017016,GO:0017022,GO:0017048,GO:0017053,GO:0019220,GO:0019222,GO:0019899,GO:0022402,GO:0022407,GO:0022409,GO:0022411,GO:0022603,GO:0022604,GO:0022607,GO:0022610,GO:0023052,GO:0030001,GO:0030027,GO:0030029,GO:0030030,GO:0030036,GO:0030041,GO:0030042,GO:0030054,GO:0030097,GO:0030098,GO:0030101,GO:0030139,GO:0030154,GO:0030155,GO:0030217,GO:0030334,GO:0030335,GO:0030336,GO:0030424,GO:0030427,GO:0030479,GO:0030587,GO:0030595,GO:0030659,GO:0030666,GO:0030674,GO:0030832,GO:0030833,GO:0030834,GO:0030835,GO:0030838,GO:0030863,GO:0030864,GO:0030865,GO:0030866,GO:0031090,GO:0031152,GO:0031252,GO:0031267,GO:0031323,GO:0031324,GO:0031334,GO:0031338,GO:0031339,GO:0031344,GO:0031345,GO:0031346,GO:0031399,GO:0031400,GO:0031410,GO:0031529,GO:0031589,GO:0031667,GO:0031668,GO:0031669,GO:0031982,GO:0032036,GO:0032101,GO:0032102,GO:0032153,GO:0032155,GO:0032268,GO:0032269,GO:0032271,GO:0032273,GO:0032420,GO:0032421,GO:0032426,GO:0032432,GO:0032501,GO:0032502,GO:0032506,GO:0032535,GO:0032796,GO:0032879,GO:0032940,GO:0032944,GO:0032946,GO:0032956,GO:0032970,GO:0032984,GO:0032991,GO:0033036,GO:0033043,GO:0033554,GO:0033673,GO:0034097,GO:0034315,GO:0034316,GO:0034613,GO:0034622,GO:0034762,GO:0034765,GO:0035556,GO:0035767,GO:0035838,GO:0036089,GO:0036119,GO:0036120,GO:0038179,GO:0038180,GO:0040011,GO:0040012,GO:0040013,GO:0040017,GO:0042060,GO:0042102,GO:0042110,GO:0042127,GO:0042129,GO:0042221,GO:0042267,GO:0042325,GO:0042326,GO:0042330,GO:0042493,GO:0042592,GO:0042594,GO:0042641,GO:0042742,GO:0042802,GO:0042803,GO:0042981,GO:0042995,GO:0043005,GO:0043029,GO:0043066,GO:0043067,GO:0043069,GO:0043085,GO:0043086,GO:0043087,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043232,GO:0043242,GO:0043244,GO:0043254,GO:0043269,GO:0043299,GO:0043320,GO:0043332,GO:0043519,GO:0043521,GO:0043523,GO:0043524,GO:0043542,GO:0043547,GO:0043548,GO:0043549,GO:0043624,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044092,GO:0044093,GO:0044387,GO:0044396,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044433,GO:0044444,GO:0044446,GO:0044448,GO:0044459,GO:0044463,GO:0044464,GO:0044764,GO:0044853,GO:0044877,GO:0045055,GO:0045087,GO:0045121,GO:0045184,GO:0045321,GO:0045335,GO:0045472,GO:0045595,GO:0045596,GO:0045785,GO:0045859,GO:0045936,GO:0046649,GO:0046677,GO:0046903,GO:0046907,GO:0046983,GO:0048365,GO:0048468,GO:0048471,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048583,GO:0048585,GO:0048731,GO:0048762,GO:0048856,GO:0048863,GO:0048864,GO:0048869,GO:0048870,GO:0048871,GO:0048872,GO:0048873,GO:0050670,GO:0050671,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050832,GO:0050863,GO:0050865,GO:0050867,GO:0050870,GO:0050896,GO:0050900,GO:0050918,GO:0050920,GO:0050922,GO:0051015,GO:0051017,GO:0051020,GO:0051049,GO:0051051,GO:0051093,GO:0051094,GO:0051125,GO:0051126,GO:0051127,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051241,GO:0051246,GO:0051248,GO:0051249,GO:0051251,GO:0051258,GO:0051261,GO:0051270,GO:0051271,GO:0051272,GO:0051279,GO:0051282,GO:0051286,GO:0051301,GO:0051336,GO:0051338,GO:0051345,GO:0051348,GO:0051493,GO:0051494,GO:0051495,GO:0051641,GO:0051649,GO:0051666,GO:0051674,GO:0051703,GO:0051704,GO:0051707,GO:0051716,GO:0051893,GO:0051895,GO:0051924,GO:0060090,GO:0060249,GO:0060255,GO:0060284,GO:0060326,GO:0060341,GO:0060485,GO:0060491,GO:0060548,GO:0060627,GO:0061024,GO:0061061,GO:0061502,GO:0061572,GO:0061640,GO:0061645,GO:0061802,GO:0061836,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070528,GO:0070663,GO:0070665,GO:0070670,GO:0070727,GO:0070838,GO:0070848,GO:0070887,GO:0070925,GO:0070938,GO:0071310,GO:0071345,GO:0071353,GO:0071363,GO:0071495,GO:0071496,GO:0071671,GO:0071672,GO:0071704,GO:0071840,GO:0071933,GO:0071944,GO:0072511,GO:0080090,GO:0080171,GO:0090066,GO:0090109,GO:0090130,GO:0090132,GO:0090135,GO:0090382,GO:0090630,GO:0090702,GO:0097327,GO:0097435,GO:0097458,GO:0097517,GO:0097708,GO:0098542,GO:0098588,GO:0098589,GO:0098590,GO:0098630,GO:0098657,GO:0098743,GO:0098796,GO:0098797,GO:0098805,GO:0098857,GO:0098858,GO:0098862,GO:0098927,GO:0099024,GO:0099080,GO:0099081,GO:0099120,GO:0099512,GO:0099513,GO:0099568,GO:0099738,GO:0110053,GO:0120025,GO:0120032,GO:0120035,GO:0120036,GO:0120038,GO:1900024,GO:1900025,GO:1900027,GO:1901214,GO:1901215,GO:1901654,GO:1901700,GO:1901879,GO:1901880,GO:1901888,GO:1901889,GO:1902410,GO:1902463,GO:1902743,GO:1902744,GO:1902745,GO:1902903,GO:1902904,GO:1902905,GO:1903037,GO:1903039,GO:1903047,GO:1903169,GO:1903391,GO:1903392,GO:1903673,GO:1904062,GO:1904643,GO:1905861,GO:1990089,GO:1990090,GO:1990819,GO:2000145,GO:2000146,GO:2000147,GO:2000392,GO:2000393,GO:2000394,GO:2000601 |
| EggNOG free text desc. | actin filament binding |
| EggNOG OGs | COG1985@1,KOG0303@2759 |
| COG Functional cat. | H |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko04131,ko04147,ko04812 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | WD40 repeat |
| Ec32 ortholog | Ec-14_004170.1 |
| Exons | 9 |
| Model size | 2089 |
| Cds size | 1209 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622929715.016661-UTR-H-elongata_contig12153:1323..1434 | 1622929715.016661-UTR-H-elongata_contig12153:1323..1434 | Himanthalia elongata Himel1 dioecious | UTR | H-elongata_contig12153 1324..1434 + |
| 1691679129.6220243-UTR-H-elongata_contig12153:1323..1434 | 1691679129.6220243-UTR-H-elongata_contig12153:1323..1434 | Himanthalia elongata Himel1 dioecious | UTR | H-elongata_contig12153 1324..1434 + |
| 1622929715.1981218-UTR-H-elongata_contig12153:7879..8648 | 1622929715.1981218-UTR-H-elongata_contig12153:7879..8648 | Himanthalia elongata Himel1 dioecious | UTR | H-elongata_contig12153 7880..8648 + |
| 1691679129.7252188-UTR-H-elongata_contig12153:7879..8648 | 1691679129.7252188-UTR-H-elongata_contig12153:7879..8648 | Himanthalia elongata Himel1 dioecious | UTR | H-elongata_contig12153 7880..8648 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622929715.0354648-CDS-H-elongata_contig12153:1434..1452 | 1622929715.0354648-CDS-H-elongata_contig12153:1434..1452 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig12153 1435..1452 + |
| 1691679129.6391177-CDS-H-elongata_contig12153:1434..1452 | 1691679129.6391177-CDS-H-elongata_contig12153:1434..1452 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig12153 1435..1452 + |
| 1622929715.052349-CDS-H-elongata_contig12153:2305..2431 | 1622929715.052349-CDS-H-elongata_contig12153:2305..2431 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig12153 2306..2431 + |
| 1691679129.6492684-CDS-H-elongata_contig12153:2305..2431 | 1691679129.6492684-CDS-H-elongata_contig12153:2305..2431 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig12153 2306..2431 + |
| 1622929715.068787-CDS-H-elongata_contig12153:4085..4246 | 1622929715.068787-CDS-H-elongata_contig12153:4085..4246 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig12153 4086..4246 + |
| 1691679129.6596155-CDS-H-elongata_contig12153:4085..4246 | 1691679129.6596155-CDS-H-elongata_contig12153:4085..4246 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig12153 4086..4246 + |
| 1622929715.0823596-CDS-H-elongata_contig12153:4959..5149 | 1622929715.0823596-CDS-H-elongata_contig12153:4959..5149 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig12153 4960..5149 + |
| 1691679129.6684928-CDS-H-elongata_contig12153:4959..5149 | 1691679129.6684928-CDS-H-elongata_contig12153:4959..5149 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig12153 4960..5149 + |
| 1622929715.0944555-CDS-H-elongata_contig12153:5646..5818 | 1622929715.0944555-CDS-H-elongata_contig12153:5646..5818 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig12153 5647..5818 + |
| 1691679129.6785529-CDS-H-elongata_contig12153:5646..5818 | 1691679129.6785529-CDS-H-elongata_contig12153:5646..5818 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig12153 5647..5818 + |
| 1622929715.1150239-CDS-H-elongata_contig12153:6170..6253 | 1622929715.1150239-CDS-H-elongata_contig12153:6170..6253 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig12153 6171..6253 + |
| 1691679129.687856-CDS-H-elongata_contig12153:6170..6253 | 1691679129.687856-CDS-H-elongata_contig12153:6170..6253 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig12153 6171..6253 + |
| 1622929715.1276968-CDS-H-elongata_contig12153:6801..6978 | 1622929715.1276968-CDS-H-elongata_contig12153:6801..6978 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig12153 6802..6978 + |
| 1691679129.6962385-CDS-H-elongata_contig12153:6801..6978 | 1691679129.6962385-CDS-H-elongata_contig12153:6801..6978 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig12153 6802..6978 + |
| 1622929715.1403592-CDS-H-elongata_contig12153:7324..7534 | 1622929715.1403592-CDS-H-elongata_contig12153:7324..7534 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig12153 7325..7534 + |
| 1691679129.707534-CDS-H-elongata_contig12153:7324..7534 | 1691679129.707534-CDS-H-elongata_contig12153:7324..7534 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig12153 7325..7534 + |
| 1622929715.1747196-CDS-H-elongata_contig12153:7807..7879 | 1622929715.1747196-CDS-H-elongata_contig12153:7807..7879 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig12153 7808..7879 + |
| 1691679129.716236-CDS-H-elongata_contig12153:7807..7879 | 1691679129.716236-CDS-H-elongata_contig12153:7807..7879 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig12153 7808..7879 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig12153.1649.1 >prot_H-elongata_contig12153.1649.1 ID=prot_H-elongata_contig12153.1649.1|Name=mRNA_H-elongata_contig12153.1649.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=403bp
MAVAVQGGGGPFAVLPYNKPGRYGRGGPLVAGHTASVLDFDFNPFHEQLM ASCSEDCSVKVWGIPDEGFTKTETEALIDLTGHGRKVTLLRFHPTAQNVL ASTSADMTVKLWDIEAGMNMNTLSGHEQLIQDIVWDYYGNTYATSCKDKT IRIVDARSPKVAQASSVPMAHEGARSSKLTFLGTKEKLLSVGFTKQSQRQ FKIWDPRNLAKAIKKLDIDQAAGVILPFYDNESSLLYLAGKGDGNIRYYE CVDEQPFCFAISEYRSTTAAKGMAMIPKRGCHVMKCETARLLKLTSNSIE PLSFVVPRKSDAFQDDLFPPCPSGQASHSADEWLRGSEKAPMKMDMRPKQ VSNSTDPAMAARKKKAFAPLKSSKDLQKELEAAMTRISLLESVIKDHGLR VP* back to topmRNA from alignment at H-elongata_contig12153:1324..8648+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-elongata_contig12153.1649.1 ID=mRNA_H-elongata_contig12153.1649.1|Name=mRNA_H-elongata_contig12153.1649.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7325bp|location=Sequence derived from alignment at H-elongata_contig12153:1324..8648+ (Himanthalia elongata Himel1 dioecious) TCCTCTCGTTCCCGACACGCCTATTCGCCACAGACGGAGCAAACGTGGAC
GGGTATACCCGTGGCCACAACGCAGGGGGAGCAGAGTTATATCAAGGGCA
ACACGAAGTACATGGCCGTTGCTGTTCAGGTGAGCCACCGCCTTCCATCC
TCTCACCACAAATGATACCGCTATTGTGTTAAACTCACGTCGGGCATGTC
GTACGGAAAAGCTTGTCGGGTTGGTTTCAGCGTGAGCAATGTTGTGTGGG
AGTCATGCACACCGAGATTGCACCGCCGCTGTTGGAGGCGAGGAATCTTT
CATGTCGTAGGATAAAACGTCGAAACGCATACTCTCCTCGGGCGGTCAAC
AATGGTATACTGTAAATATATATTTCCATATTATTTATGTGGGAAGGAGC
CGTGGGGAGTTTCATGTTCTTCGGTTTAGATATTAACGCAAAAGAGGGAC
TACTCGGCGGTTTCCGAGGACATCTATAGGCTTTACCACCCGTACCAGCA
TCGGTTGCACCGCACAGCGGAAGAAGATATGCTCAAGAAACTTTTTTTTT
TCCCCACGGCCAACCGGAAGCTCTGACGCCTCCAGGGCATGTCGTGCGTG
TTGTGACAACTGCTCCTTGAGGTCGTTTATGGGGTACTGTATCAGTATAG
CTTATTATCGGTGGCAGGTTTTTGTTGTTGATTTCAATCTTAACTGTATC
GCACATGTCAACTGTACCAATAGTAGGTGTGGGTGTGGCAAAAGAGAGGC
GCACAATAATTGGTCCATGGAGATACCTGAATAGGCTGCACCCATTACTC
ATGCTACCTTGAGGACTACTGGCTCAGTGCCGGCGGACTCTCGGGGGTAA
TTCCAATTTCTATATTTTCCTGTCAAATCCTGTGTATGGAGTGTTCATTC
TACCCGCCACCACCACCACTCCCCAACGAAGTTTCCATGGTACTATTTCT
CCTCCCATCCTTCCTCAAACACATTCTCCCAGGGAGGAGGCGGGCCTTTC
GCGGTGTTGCCCTACAACAAGCCGGGGCGCTACGGTCGAGGGGGGCCGCT
CGTGGCCGGCCACACTGCGTCGGTTCTCGACTTCGATTTCAACCCTTTCC
ACGAGCAGGTGAAGCATTGAGCGCGCCATTCCCTGGGGAGGGATGGGGGG
GGGGGTTAAGCAAGGGTAATACTCGCCGGTGTTAGCCCGACAGGAGGGGT
TGGGGTGGGTACGCAGGGAATATATAAAGAGTAGCTGCTTGCCATCATCA
TAACGATATTATATGGCTCCGAACAAATCTATTTGACCATAGACTATGCT
CGGAGCGAGAAAGCAGAGGGAAGGAAGAACGCTCTTCTTTTGCCGTGTAC
CTGCTTGACTATACGCCGGTGGTTTTTGGTGTCAACTTTTTGGTAGGGCT
GGGTACTGGACCAGTACGCACTGGCAGTACAACTGGTACTGGCTGCGGAG
CAGCCAGTACTGCCTGTACCTTGAACTTACGTACGTCCTACTCAAAATGC
CTCATTATTCAACGGAAACCATACGTACCCCCATGACACTATCATCTGCG
CCCCCCGGGAGAGAAGAATACGCGCAGCAAACACACACACACACACTGAT
AGAGGGGTGGAGACCGTGAGCACAATGGACGTACGCACTGGCAGTACAAC
TTGTACTGACAGAATCCTGGTACTGGCTGCGGAGCAGCCAGTACTGCCAG
TACTTTGAACTTACGTCCTAAAACGCCTCATTATTCAACGGAAACCCTAC
GTACCCCCATGGCATTATCATCTGCGCCCCCCGGGAGAGAGGAGTACGCG
CAGCACACACACACTGATAGAGGGGTGGAGACCGTGGGCACAATAGACGG
CGACACCTCAGCCACAAGCACCGCGCCCGATGCAAACCCAAGCGGCATCA
CTAGTGCTGCTGTTGCTGAAGAAGTGGCACTTGTGTCGCCTCCCACACAC
GCTGAGCTCCAGCAGAAGCTGAAAAAGAGACTACGTTCAGAGAGGACGCT
AAGACTGAAGTCCCAGTTGAGGTCGAAGCCGAGCGAAACGAGCGCATATG
CGTGGGTGTTCTTTCAATGCTACGTTTAAGTGCGTCTCCATATGTACGCC
ATCTACAGGCTGTGCTGGAAGCAGGAGGAGCACGATCGAGCTGAGATCGC
GTACAATCAGTCACCAACTAATATTTCTTCGCATAATAAAATAAGATATC
ATTTGCTTCCAATTCTACGAAGCGGGGTGATGCACTTTGAAATTGAACAT
TTTTTTCGGGTCCAAATGACGAAAAATCGAAAAAGCTTCGCACGAAAATT
GCTTTTGAAAGCATGGTATAAAGCAACATATTTTTTACTCTAGTGAAGCC
GAATCGCGTAAAAATGCGCCTCTGGCGGGGCCCCCTCACCAGCCTGGGGG
GGGGCGGTGGTCGCGGCTGCTCCGCGACCCAAAGTGCTGGCAAGATCCAG
TAAACTGGCTGCTGACGCAATCAGGCTTTAATGTACTGGCACTGCGCGCC
AGTAGCTAGCCCTCCTTTTTAGCCTTTATAGGCCGCCCTCCTTCTTCCAC
CATTTTCGCGTGTAATATGAGCGACATGAGATGGCAGTCTGTGGCTGTAA
ATACTCTGGGTCGGTTCTGTCGGGGTTCTGTGATAGGAGGGTGGCACTCC
ACAGTATATCCCACTCGACGGAGATGTACTGTTCATTCTCTTGACTAAGT
TGTCTCTCCCCGTTGGTGTGTGTGTGTGTGTATGTGTGTTCTCGCGCCAT
TTACGAGCGTAGCTTATGGCCAGCTGCTCCGAAGACTGCTCGGTAAAGGT
TTGGGGCATTCCAGATGAAGGGTTCACGAAGACAGAAACGGAAGCCCTGA
TTGATCTTACTGGCCACGGGCGGAAGGTCACCCTCTTGCGCTTTCATCCC
ACCGCGCAAAACGTGCTGGCGAGGTAAGAAGAGTGGGAAGACCTCCTTGT
GGGTGCGCGTCGGGTTTTCCTCTATCGCTCCATCGCCTCTGCCAACCCTT
GGTTGCCTATCTGCCCGCACTTGCCATGAACAATCTGCCACGCGTGCTTG
GAAGAAGTAGTTTGACAATGCGCGTGTGGCGATCAAATCGGATGTGTAAC
GGGCTACCCGTTTGTGGGTGATGAAAGCGGCTATAAAAAGGGGGCTGGAT
TTTAACGAATGACTCAACCGGCCATGGTGCGCGTATGATTCTACAGCGGT
AGTGCTGATGCTGATGCGGCGACTAAAAGAGTCGGCCAACGTTCGAGCCG
CACCCTGATATCATTTGGGGTCATTCTCCCGACGGTTCCAGCTGGCCCCA
GTGGCTGGCTCGGAGAAGTGAGGGTTGACGAGCTAGGACCGCTTTTTCTT
TTTCTCTCGGGCGAAAATATGCGCCTGGTGACGATCTATCCCTCCACGCG
AAGCAGAGACCGAAAAATTCAGCGCTGCCTTTGGTGAAGAAGGAGGATGC
TCGGCAAGCTACTCGTGGGGGCGCGATCGCACACCAACCCTTTGTCTCCC
TTGGCTCTCCACAGGCGCAAACTAGAAAGCTCTCAACAACGGCCTGTGAT
TTTTTACTTTGACATATATCCCCTGGTGCCCTCGCCCGTCCTCCTCGTGT
TTCCTTTCAACAATTGACGTGGGTGCCGACGCTTAGCACAAGCGCGGACA
TGACGGTGAAGTTGTGGGACATCGAGGCGGGCATGAACATGAACACGCTA
TCCGGCCACGAGCAGCTTATCCAGGACATCGTTTGGGACTACTACGGCAA
CACGTACGCCACTTCCTGCAAAGACAAGACAATCCGCATCGTCGATGCCA
GGTCGCCAAAAGTTGCTCAGGCGAGTGTGCGTTTTGTTTTAGAGGGAGAT
TTCGGGGGTAGGGCTTGCACGCGCGGGAAGGAGCTGTGTGGGGATGCTCT
GTCAAGAAGGAAAAGGTTGCCTTCAGAAACTTTTGTGTGTGTTTTCGCTT
TCCTATGTCGGAGAGATCAAAGGATAGGATAGCATACTGTATCTAAAGGA
TGTCTACTGGGAGAAACGTCCTCCCGGGTGTAAAACCGCGTCGAGCTCTC
ATAAGCATATTTTTGTCATGAAAGCTTATCACTGGACAAATATATGTTAC
TGCAGAGAATGTCATGTTGCTGTTTTTTGTTATTGTTTTTGTGTATGTGG
GGGGGTGTTATTATTATTATTGTTTACCACAAGCGCGACGTATGAGTTGT
CTCGTGTACCGGCCGGCGCTTCCGGACGCCCGCTCGTATCCTCGCCCACG
TTGGTGCGTGCACTGGTTCTTCCGTGTGTGCACTGACCCATCCGCCCCTT
TTGTCACGATTCCCTTGCCTCAGTCCGTTCCGATGGCGCATGAGGGCGCC
CGTTCGTCCAAGCTCACGTTCCTGGGCACGAAGGAAAAGCTCCTGAGCGT
GGGCTTTACGAAGCAGAGCCAGCGCCAATTCAAGATATGGGATCCTCGAA
ACCTGGCCAAGGCAATCAAGAAACTGGACATCGACCAGGCCGCCGGTGTG
ACTTTTCTTCGTTTCCATTATTGTTTCCAACCGACTCGGGACTACGGCGG
TCTGTCTGCCTCGTTTCTTGTGGCCCGATTATTTGGTTTTGTTCGCGTTG
ACTCGAACAAACTGACGCAGCAGGCCTTGTGTGTTATGTGAGCTCGCGTA
GGGCAGGGAGTACGATCTCGATGCCCGCGCATCCGCCTCGGCTTTTGGAC
CGATTTCCTTTATTCTATAGTGTTCGGCCTTTTCTGCCCAAGCACTGCGG
TAGCGCCGGTAGGTGGGTGGGTGGGTGGGCCATTCCTGCATGCGCTTATG
ACGGAGAAAGCTTGCTCGCGATCGTCGTATCAAACTGGCCATGGCAGGCG
TTATCCTCCCGTTCTACGACAACGAAAGCTCGTTGCTTTACTTGGCGGGT
AAGGGAGACGGAAACATCCGCTACTATGAGGTAAGCGCGCACGAGAAGCC
GGTAGTAGAACCCCATTCGACTTAACGTGAATTTGTTAAGAGAATCTCCT
AACGAACGAAGTTTTTAGCAATATGGTACGCGTAAAGGGGGATGAACGCG
ACTTCCAAGTGAGTCTGCGAAGCTTTTGGAAACCAGGCGGCCATAGGGGC
CGCCTCTTGTAAAAAACCCAGGTCCGCCGCACCGCCGCGTCGTTTTTTAG
GAGGCAGTGACGAGGAGACGGTGAGAGTCGATTACACGTGACGATAAAGT
TATCTGAAAGCGTATGCAGAATAATCGATGCTCAGGGCACGCGCTGTATG
TCGCATAGGCGTATGAAGACACATATCATTCGTAAGCGCGGCACCACCGC
CGCCGGCATGTTCGCCTTGACTTCATACAAATATATATATATATTTTTTC
CTGTCGATACGTCGCCACTTGCAGCGCATTAGCAACGTGCCTACTGTCGC
TTGCTGCTGCGTTGCGTCAAATACTTCTTTAAAAAAAAAACTGCGTGCCT
AACGCCTCCATCCTCGTACACGGGATAGTGCGTGGATGAGCAACCGTTCT
GCTTCGCCATTAGCGAGTACCGATCGACGACAGCGGCTAAGGGAATGGCC
ATGATCCCGAAGCGCGGGTGTCACGTAATGAAGTGCGAGACAGCTCGGCT
GCTCAAGCTCACGTCCAACTCGATCGAGCCCCTGAGCTTTGTTGTGCCAC
GAAAGGTGCGTATCCTGAGCCGGAGCCGGAGTCGGAGAATTCGGGCGATC
TTTCGCCGTAGGCAGGGGTGCTTTGGTGTTTCTGGTTGATGTGTATGACG
GTGTAAAGAGTGGTATCGAAGTGAACGCCTCGTTTATAACCTAGAAGGGG
TATCAGTAGCAGGACAAATATCCGTGTTTTTTCCCATTTCTTCCTACTTC
GCCGTCATATCTTCCCCTCCCTCGCGTATCCCACGTTCATCTCTCATGTT
TCTAGCGCACCTCCCCTATCTACCCTTACGCTGCGCACCTCGCTAACAAA
CCCGACAAACTGCCCCTCCACCGAAAAAATAAAACACATACACACACACA
GTCGGACGCGTTCCAGGACGATCTGTTTCCGCCGTGCCCATCAGGGCAAG
CGTCACATTCGGCCGACGAGTGGCTAAGGGGGTCGGAAAAAGCGCCCATG
AAGATGGACATGAGGCCAAAACAGGTTAGCAATTCCACGGACCCAGCCAT
GGCGGCGAGGAAGAAGAAGGCTTTCGCCCCACTGAAGAGCTCCAAGGACC
TCCAGAAAGAGGTGATGAGCTGGATTTTTTCAGAAAAGTCCGTGGGAGTC
GTGTAGAAAAATTGAACGGGCATGTTGTGATATTTGTAATGGGTAAAATA
AAAAAATAAAACTTACTCGATTTTGCTGAACCAAACACGCGCGCTAAGCA
GAGAATCGCGCTTGCATCAAACTCCCGATTGGCGAGCTAGTGGATCGAAA
TTCTGACCGAACGTCCCTCTCTTCCTCCTCCCCGCCCCCCTCTAACAATT
CCACCAACTATGCCTCTTGTGTGGTTGGTCCCAGCTTGAAGCAGCGATGA
CGCGCATATCACTCTTGGAGAGTGTGATCAAGGACCACGGGCTTAGGGTG
CCTTGAGAGCCGTTGCAACTCTCTGTACGCTTTGAGTGGGACAGGATAGG
AGATAGAAGAAGGGGCGTCGATGGGGTATTATGGATGGGGCCGGTGGGCT
GGAATGAGACTGTCCTTTATACTCAGACGTGTTTGTCCTTTCGATGTAAT
TTGGGTGAAGTAGATGGATGCAAATTCTTGAGTTGCCTCGTGAAGGGTAG
TGTTGTTGGGTGAGACGAACAAAGAGGGAAGGGAACTGCGAAAGAGAGAG
CCTTTGAGCGACCCTACCGTGAAGCGCCACGCCAACACAGGAAAGGTTTG
TCTGGCGCTTGTGACTCTTGGCTTTTAGTTTGAAGTCGATGCCTCAGGAA
AAATGTCTTGTCTCCCTCGTTTCCCACGTTGGGTTTTTCTCCCTCCTCCC
TTGGAAGGTTCACCTTTGCGGTGACGTGCTTTTGCCGTTATCGCTTTCAT
ACTAGCTACACCCCCCTGGGTTTCGTATTTGTAGAGGCCATGTTTCGCAC
GCCTCGAGAAAATAAAGGCGTAGGAGTCTCGCAAGTGGTCACGAAAGAGG
CAAATGAAATTTAAAATGAAGCACGGGACGGTAAGGCCTCGAGGGGCACT
CAATGTGTGTGCGTGAAAGGGGGGGAGTTTGGCGTCATCGTGTTCCCCCG
CTTCTCTTTTCAGTTCTTGAGTAGGCGTGTTTTGGGGGCGCAGGGTCTTT
AAAGAATAGGGAAGCTCTACCGCATCGAGTGAGCAACAAGTTTTTTGAGG
GGGCGAGTTTGCGCTCTTAAAAGCC back to topCoding sequence (CDS) from alignment at H-elongata_contig12153:1324..8648+ >mRNA_H-elongata_contig12153.1649.1 ID=mRNA_H-elongata_contig12153.1649.1|Name=mRNA_H-elongata_contig12153.1649.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2418bp|location=Sequence derived from alignment at H-elongata_contig12153:1324..8648+ (Himanthalia elongata Himel1 dioecious) ATGGCCGTTGCTGTTCAGATGGCCGTTGCTGTTCAGGGAGGAGGCGGGCC TTTCGCGGTGTTGCCCTACAACAAGCCGGGGCGCTACGGTCGAGGGGGGC CGCTCGTGGCCGGCCACACTGCGTCGGTTCTCGACTTCGATTTCAACCCT TTCCACGAGCAGGGAGGAGGCGGGCCTTTCGCGGTGTTGCCCTACAACAA GCCGGGGCGCTACGGTCGAGGGGGGCCGCTCGTGGCCGGCCACACTGCGT CGGTTCTCGACTTCGATTTCAACCCTTTCCACGAGCAGCTTATGGCCAGC TGCTCCGAAGACTGCTCGGTAAAGGTTTGGGGCATTCCAGATGAAGGGTT CACGAAGACAGAAACGGAAGCCCTGATTGATCTTACTGGCCACGGGCGGA AGGTCACCCTCTTGCGCTTTCATCCCACCGCGCAAAACGTGCTGGCGAGC TTATGGCCAGCTGCTCCGAAGACTGCTCGGTAAAGGTTTGGGGCATTCCA GATGAAGGGTTCACGAAGACAGAAACGGAAGCCCTGATTGATCTTACTGG CCACGGGCGGAAGGTCACCCTCTTGCGCTTTCATCCCACCGCGCAAAACG TGCTGGCGAGCACAAGCGCGGACATGACGGTGAAGTTGTGGGACATCGAG GCGGGCATGAACATGAACACGCTATCCGGCCACGAGCAGCTTATCCAGGA CATCGTTTGGGACTACTACGGCAACACGTACGCCACTTCCTGCAAAGACA AGACAATCCGCATCGTCGATGCCAGGTCGCCAAAAGTTGCTCAGGCGAGT CACAAGCGCGGACATGACGGTGAAGTTGTGGGACATCGAGGCGGGCATGA ACATGAACACGCTATCCGGCCACGAGCAGCTTATCCAGGACATCGTTTGG GACTACTACGGCAACACGTACGCCACTTCCTGCAAAGACAAGACAATCCG CATCGTCGATGCCAGGTCGCCAAAAGTTGCTCAGGCGAGTTCCGTTCCGA TGGCGCATGAGGGCGCCCGTTCGTCCAAGCTCACGTTCCTGGGCACGAAG GAAAAGCTCCTGAGCGTGGGCTTTACGAAGCAGAGCCAGCGCCAATTCAA GATATGGGATCCTCGAAACCTGGCCAAGGCAATCAAGAAACTGGACATCG ACCAGGCCGCCGTCCGTTCCGATGGCGCATGAGGGCGCCCGTTCGTCCAA GCTCACGTTCCTGGGCACGAAGGAAAAGCTCCTGAGCGTGGGCTTTACGA AGCAGAGCCAGCGCCAATTCAAGATATGGGATCCTCGAAACCTGGCCAAG GCAATCAAGAAACTGGACATCGACCAGGCCGCCGGCGTTATCCTCCCGTT CTACGACAACGAAAGCTCGTTGCTTTACTTGGCGGGTAAGGGAGACGGAA ACATCCGCTACTATGAGGCGTTATCCTCCCGTTCTACGACAACGAAAGCT CGTTGCTTTACTTGGCGGGTAAGGGAGACGGAAACATCCGCTACTATGAG TGCGTGGATGAGCAACCGTTCTGCTTCGCCATTAGCGAGTACCGATCGAC GACAGCGGCTAAGGGAATGGCCATGATCCCGAAGCGCGGGTGTCACGTAA TGAAGTGCGAGACAGCTCGGCTGCTCAAGCTCACGTCCAACTCGATCGAG CCCCTGAGCTTTGTTGTGCCACGAAAGTGCGTGGATGAGCAACCGTTCTG CTTCGCCATTAGCGAGTACCGATCGACGACAGCGGCTAAGGGAATGGCCA TGATCCCGAAGCGCGGGTGTCACGTAATGAAGTGCGAGACAGCTCGGCTG CTCAAGCTCACGTCCAACTCGATCGAGCCCCTGAGCTTTGTTGTGCCACG AAAGTCGGACGCGTTCCAGGACGATCTGTTTCCGCCGTGCCCATCAGGGC AAGCGTCACATTCGGCCGACGAGTGGCTAAGGGGGTCGGAAAAAGCGCCC ATGAAGATGGACATGAGGCCAAAACAGGTTAGCAATTCCACGGACCCAGC CATGGCGGCGAGGAAGAAGAAGGCTTTCGCCCCACTGAAGAGCTCCAAGG ACCTCCAGAAAGAGTCGGACGCGTTCCAGGACGATCTGTTTCCGCCGTGC CCATCAGGGCAAGCGTCACATTCGGCCGACGAGTGGCTAAGGGGGTCGGA AAAAGCGCCCATGAAGATGGACATGAGGCCAAAACAGGTTAGCAATTCCA CGGACCCAGCCATGGCGGCGAGGAAGAAGAAGGCTTTCGCCCCACTGAAG AGCTCCAAGGACCTCCAGAAAGAGCTTGAAGCAGCGATGACGCGCATATC ACTCTTGGAGAGTGTGATCAAGGACCACGGGCTTAGGGTGCCTTGACTTG AAGCAGCGATGACGCGCATATCACTCTTGGAGAGTGTGATCAAGGACCAC GGGCTTAGGGTGCCTTGA back to top
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