prot_H-elongata_contig89876.16480.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig89876.16480.1
Unique Nameprot_H-elongata_contig89876.16480.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length121
Homology
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BLAST of mRNA_H-elongata_contig89876.16480.1 vs. uniprot
Match: A0A6H5JC70_9PHAE (HSP70 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JC70_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 1.470e-11
Identity = 40/50 (80.00%), Postives = 43/50 (86.00%), Query Frame = 0 
Query:    3 PHETPAFKSSEVEPALKSLKTLVVKLSKKPAPKKEKPAVKASDNSTEETA 52
            PHETP FKS+EVEPALK+LK LV KLSKKPAPKKEKPA   +DNSTEE A
Sbjct:  890 PHETPVFKSAEVEPALKALKNLVTKLSKKPAPKKEKPAK--ADNSTEEAA 937
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BLAST of mRNA_H-elongata_contig89876.16480.1 vs. uniprot
Match: A0A2R4K3C3_SACJA (HSP70 n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A2R4K3C3_SACJA)

HSP 1 Score: 66.2 bits (160), Expect = 3.280e-10
Identity = 40/56 (71.43%), Postives = 46/56 (82.14%), Query Frame = 0 
Query:    4 HETPAFKSSEVEPALKSLKTLVVKLSKKPAPKKEKPAVKASDNSTEETAGGSGGEA 59
            HETP FKS++VEPALK LKTL+ KL+KKP PKKEKPA   +DNSTEE AGG G +A
Sbjct:  878 HETPVFKSTDVEPALKPLKTLITKLAKKPVPKKEKPAK--ADNSTEE-AGGDGDDA 930
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig89876.16480.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JC70_9PHAE1.470e-1180.00HSP70 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=... [more]
A0A2R4K3C3_SACJA3.280e-1071.43HSP70 n=1 Tax=Saccharina japonica TaxID=88149 RepI... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig89876contigH-elongata_contig89876:4..366 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig89876.16480.1mRNA_H-elongata_contig89876.16480.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig89876 4..568 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig89876.16480.1 ID=prot_H-elongata_contig89876.16480.1|Name=mRNA_H-elongata_contig89876.16480.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=121bp
FAPHETPAFKSSEVEPALKSLKTLVVKLSKKPAPKKEKPAVKASDNSTEE
TAGGSGGEANAGDSSNSTEEGGGEAANGERVDGAEEEDEEASVERQSQAR
GEDEEGGRGGEASESVKDEL*
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