mRNA_H-elongata_contig89812.16477.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig89812.16477.1
Unique NamemRNA_H-elongata_contig89812.16477.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig89812.16477.1 vs. uniprot
Match: D7G1Y9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Y9_ECTSI)

HSP 1 Score: 220 bits (560), Expect = 8.780e-71
Identity = 110/126 (87.30%), Postives = 120/126 (95.24%), Query Frame = 1 
Query:    1 DDSVDQIFVFFPDDEKVGVKPIRSYSDKMLAEEVKKAIIVVKGGITPFARSAIMELCAQREVQVEDFKDAELMLDITEHTLVPQHTVLTPEQKSELLKRYKLKDTQLPRIQATDPVARFYGMQVGK 378
            DD +DQIFVFFPDDEKVGVKPIRSYS+KML EEVK+AIIV+KGGITPFARSAI ELCAQREVQVEDFKDAELMLDITEHTLVP+H VL+ EQK+ELLKRYKLKDTQLPRIQ+TDPVARF+GMQ G+
Sbjct:   66 DDPMDQIFVFFPDDEKVGVKPIRSYSEKMLEEEVKRAIIVIKGGITPFARSAIQELCAQREVQVEDFKDAELMLDITEHTLVPEHQVLSSEQKAELLKRYKLKDTQLPRIQSTDPVARFFGMQKGQ 191
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BLAST of mRNA_H-elongata_contig89812.16477.1 vs. uniprot
Match: A0A835YLJ3_9STRA (RNA polymerase Rpb5, C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLJ3_9STRA)

HSP 1 Score: 177 bits (448), Expect = 9.340e-54
Identity = 86/126 (68.25%), Postives = 106/126 (84.13%), Query Frame = 1 
Query:    1 DDSVDQIFVFFPDDEKVGVKPIRSYSDKMLAEEVKKAIIVVKGGITPFARSAIMELCAQREVQVEDFKDAELMLDITEHTLVPQHTVLTPEQKSELLKRYKLKDTQLPRIQATDPVARFYGMQVGK 378
            DD  D+IFVFFPD+EKVGVK IR+Y D+M  E V+K+IIVV+GG+TP +R A  +LC QR VQ+EDFKDAELM+DIT+H LVP+H VL  E+K+ELLKRYKL DTQLPRI +TDPVAR+YG+Q G+
Sbjct:   67 DDPSDRIFVFFPDEEKVGVKTIRTYGDRMKDENVRKSIIVVRGGMTPLSRDANAQLCQQRGVQIEDFKDAELMVDITDHVLVPEHQVLNNEEKAELLKRYKLTDTQLPRIHSTDPVARYYGLQRGQ 192
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BLAST of mRNA_H-elongata_contig89812.16477.1 vs. uniprot
Match: A0A1Z5K1Q5_FISSO (DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K1Q5_FISSO)

HSP 1 Score: 155 bits (393), Expect = 2.850e-45
Identity = 77/126 (61.11%), Postives = 101/126 (80.16%), Query Frame = 1 
Query:    1 DDSVDQIFVFFPDDEKVGVKPIRSYSDKMLAEEVKKAIIVVKGGITPFARSAIMELCAQREVQVEDFKDAELMLDITEHTLVPQHTVLTPEQKSELLKRYKLKDTQLPRIQATDPVARFYGMQVGK 378
            DD  DQ+FVFFP+DEKVGVKPI+ Y+D+M AE V  AI+V+K  ITPFA+ A+ E+      ++E FK++EL++DIT+H LVPQH VLT  +K+ELLKRY+LKDTQLPRIQ  DP+AR+YGM+ G+
Sbjct:   81 DDEHDQLFVFFPEDEKVGVKPIKVYTDRMRAEGVSNAIMVLKVDITPFAKQAVQEM--SDSFRMEHFKESELLVDITQHQLVPQHQVLTAAEKAELLKRYRLKDTQLPRIQPNDPIARYYGMKRGQ 204
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BLAST of mRNA_H-elongata_contig89812.16477.1 vs. uniprot
Match: B7FSY0_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FSY0_PHATC)

HSP 1 Score: 155 bits (393), Expect = 3.110e-45
Identity = 74/126 (58.73%), Postives = 102/126 (80.95%), Query Frame = 1 
Query:    1 DDSVDQIFVFFPDDEKVGVKPIRSYSDKMLAEEVKKAIIVVKGGITPFARSAIMELCAQREVQVEDFKDAELMLDITEHTLVPQHTVLTPEQKSELLKRYKLKDTQLPRIQATDPVARFYGMQVGK 378
            DD  +Q+F+FFP+DEKVGVKPI+ Y+D+M AE V  AII+++  ITPFA+ A+ E+      ++E FK++EL++DIT+H LVP H VLTP +K+ELLKRY+LKD+QLPRIQ+ DPVAR+YGM+ G+
Sbjct:   84 DDDTNQLFIFFPEDEKVGVKPIKVYTDRMRAESVSNAIIILRVDITPFAKQAVQEM--SDSFRIEHFKESELLVDITKHQLVPVHQVLTPNEKNELLKRYRLKDSQLPRIQSNDPVARYYGMRRGQ 207
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BLAST of mRNA_H-elongata_contig89812.16477.1 vs. uniprot
Match: A0A7S2KP14_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KP14_9STRA)

HSP 1 Score: 154 bits (388), Expect = 1.820e-44
Identity = 76/126 (60.32%), Postives = 100/126 (79.37%), Query Frame = 1 
Query:    1 DDSVDQIFVFFPDDEKVGVKPIRSYSDKMLAEEVKKAIIVVKGGITPFARSAIMELCAQREVQVEDFKDAELMLDITEHTLVPQHTVLTPEQKSELLKRYKLKDTQLPRIQATDPVARFYGMQVGK 378
            DD  +Q+FVFFP+DEKVGVKPI++ +D+M  E V +AI+V++  ITP AR A+ EL      ++E FK++EL++DITEHTLVP+H VL+  +K ELLKRY+LKDTQLPRIQ  DPVARFYGM+ G+
Sbjct:   85 DDESNQLFVFFPEDEKVGVKPIKTLTDRMKDESVSRAILVLRVDITPIARQALQEL--SESFRIEHFKESELLVDITEHTLVPEHQVLSTNEKQELLKRYRLKDTQLPRIQPNDPVARFYGMKRGQ 208
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BLAST of mRNA_H-elongata_contig89812.16477.1 vs. uniprot
Match: B8C1Q1_THAPS (RPB5,-like protein to RNA polymerase i n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1Q1_THAPS)

HSP 1 Score: 153 bits (387), Expect = 2.370e-44
Identity = 74/126 (58.73%), Postives = 101/126 (80.16%), Query Frame = 1 
Query:    1 DDSVDQIFVFFPDDEKVGVKPIRSYSDKMLAEEVKKAIIVVKGGITPFARSAIMELCAQREVQVEDFKDAELMLDITEHTLVPQHTVLTPEQKSELLKRYKLKDTQLPRIQATDPVARFYGMQVGK 378
            DD  +Q+FVFFP+DEKVGVKPI+  +D+M  E V  AI+V++G ITPFA+ A++E+      ++E FK+AEL++DITEHTLVP+H VL+  +K ELLKRY+L++TQLPRIQ  DPVAR+YGM+ G+
Sbjct:   82 DDETNQLFVFFPEDEKVGVKPIKILTDRMKDENVSNAILVLRGDITPFAKQAVLEM--SDSFRLEHFKEAELLVDITEHTLVPEHLVLSQNEKQELLKRYRLRETQLPRIQPNDPVARYYGMKRGQ 205
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BLAST of mRNA_H-elongata_contig89812.16477.1 vs. uniprot
Match: W4GMP1_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces TaxID=100860 RepID=W4GMP1_9STRA)

HSP 1 Score: 152 bits (385), Expect = 2.590e-44
Identity = 75/126 (59.52%), Postives = 100/126 (79.37%), Query Frame = 1 
Query:    1 DDSVDQIFVFFPDDEKVGVKPIRSYSDKMLAEEVKKAIIVVKGGITPFARSAIMELCAQREVQVEDFKDAELMLDITEHTLVPQHTVLTPEQKSELLKRYKLKDTQLPRIQATDPVARFYGMQVGK 378
            DD  D +FVF+P+D KVGVKPIR+Y ++M  E V KAI++V+ GITPFA+ A+ E+  +   +++ FK+ EL++DITEHTLVP H VLT E+K  LLKRYKLKDTQLPR+QA+DP+AR+YGM  G+
Sbjct:   61 DDPSDNLFVFYPEDAKVGVKPIRNYCNRMKDENVTKAILIVQDGITPFAKQALNEMAPR--YKIDHFKENELLVDITEHTLVPVHKVLTKEEKLALLKRYKLKDTQLPRMQASDPIARYYGMSRGQ 184
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BLAST of mRNA_H-elongata_contig89812.16477.1 vs. uniprot
Match: A0A7S1ZQK9_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZQK9_TRICV)

HSP 1 Score: 151 bits (382), Expect = 4.210e-44
Identity = 73/125 (58.40%), Postives = 98/125 (78.40%), Query Frame = 1 
Query:    1 DDSVDQIFVFFPDDEKVGVKPIRSYSDKMLAEEVKKAIIVVKGGITPFARSAIMELCAQREVQVEDFKDAELMLDITEHTLVPQHTVLTPEQKSELLKRYKLKDTQLPRIQATDPVARFYGMQVG 375
            DD  +Q+FVFFP+DEKVGVKPI+ Y+D+M  E V  A++V++  ITPFA+ A+ E+      ++E FK+AEL++DITEH LVP+H VL+  +K ELLKRY+LK+TQLPRIQ  DPVAR+YGM+ G
Sbjct:   42 DDETNQLFVFFPEDEKVGVKPIKVYTDRMREEAVSNAVLVLRVDITPFAKQAVQEM--SDSFRIEHFKEAELLVDITEHKLVPEHQVLSQNEKQELLKRYRLKETQLPRIQTNDPVARYYGMKRG 164
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BLAST of mRNA_H-elongata_contig89812.16477.1 vs. uniprot
Match: A0A7S3V5Q1_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V5Q1_9STRA)

HSP 1 Score: 153 bits (386), Expect = 6.930e-44
Identity = 74/126 (58.73%), Postives = 101/126 (80.16%), Query Frame = 1 
Query:    1 DDSVDQIFVFFPDDEKVGVKPIRSYSDKMLAEEVKKAIIVVKGGITPFARSAIMELCAQREVQVEDFKDAELMLDITEHTLVPQHTVLTPEQKSELLKRYKLKDTQLPRIQATDPVARFYGMQVGK 378
            DD  DQ+FVFFP+DEKVGVKPI+ Y+D+M  E V  +I+V++  IT +A+ A+ E+      ++E FK+AEL++DITEHTLVP+H VL+P +K+ELLKRY+LK+TQLPRIQ  DPVAR+YGM+ G+
Sbjct:  108 DDETDQLFVFFPEDEKVGVKPIKVYTDRMKDEAVTNSILVLRVDITGYAKQAVQEM--SDSCRIEHFKEAELLVDITEHTLVPEHQVLSPNEKAELLKRYRLKETQLPRIQPNDPVARYYGMKRGQ 231
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BLAST of mRNA_H-elongata_contig89812.16477.1 vs. uniprot
Match: A0A067CT03_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CT03_SAPPC)

HSP 1 Score: 151 bits (381), Expect = 1.140e-43
Identity = 74/126 (58.73%), Postives = 99/126 (78.57%), Query Frame = 1 
Query:    1 DDSVDQIFVFFPDDEKVGVKPIRSYSDKMLAEEVKKAIIVVKGGITPFARSAIMELCAQREVQVEDFKDAELMLDITEHTLVPQHTVLTPEQKSELLKRYKLKDTQLPRIQATDPVARFYGMQVGK 378
            DD  D +FVF+PDD KVGVKPIR+Y ++M  E V KAI++V+ GITPFA+ A+ E+  +   +++ FK+ EL++DITEHTLVP H VLT E+K  LLKRYKLKD+QLPR+Q +DP+AR+YGM  G+
Sbjct:   64 DDPSDNLFVFYPDDAKVGVKPIRTYCNRMKDENVTKAILIVQDGITPFAKQALNEMAPR--YKIDHFKETELLVDITEHTLVPVHKVLTREEKIALLKRYKLKDSQLPRMQVSDPIARYYGMTRGQ 187
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig89812.16477.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1Y9_ECTSI8.780e-7187.30Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YLJ3_9STRA9.340e-5468.25RNA polymerase Rpb5, C-terminal domain-containing ... [more]
A0A1Z5K1Q5_FISSO2.850e-4561.11DNA-directed RNA polymerases I, II, and III subuni... [more]
B7FSY0_PHATC3.110e-4558.73Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S2KP14_9STRA1.820e-4460.32Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
B8C1Q1_THAPS2.370e-4458.73RPB5,-like protein to RNA polymerase i n=1 Tax=Tha... [more]
W4GMP1_9STRA2.590e-4459.52Uncharacterized protein n=3 Tax=Aphanomyces TaxID=... [more]
A0A7S1ZQK9_TRICV4.210e-4458.40Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S3V5Q1_9STRA6.930e-4458.73Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A067CT03_SAPPC1.140e-4358.73Uncharacterized protein n=4 Tax=Saprolegniaceae Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig89812contigH-elongata_contig89812:476..2244 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score223.4
Seed ortholog evalue6.3e-56
Seed eggNOG ortholog2880.D7G1Y9
Preferred nameRPB5
KEGG rclassRC02795
KEGG koko:K03013
KEGG ReactionR00435,R00441,R00442,R00443
KEGG Pathwayko00230,ko00240,ko01100,ko03020,ko04623,ko05016,ko05169,map00230,map00240,map01100,map03020,map04623,map05016,map05169
KEGG ModuleM00180,M00181,M00182
GOsGO:0000428,GO:0001054,GO:0003674,GO:0003700,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005665,GO:0005666,GO:0005730,GO:0005736,GO:0006139,GO:0006351,GO:0006353,GO:0006355,GO:0006360,GO:0006366,GO:0006383,GO:0006386,GO:0006399,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009304,GO:0009719,GO:0009725,GO:0009733,GO:0009889,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016591,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0030880,GO:0031323,GO:0031326,GO:0031974,GO:0031981,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0042221,GO:0042797,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044452,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0055029,GO:0060255,GO:0061695,GO:0065007,GO:0070013,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:0097747,GO:0098781,GO:0140098,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1903506,GO:1990234,GO:2000112,GO:2001141
EggNOG free text desc.DNA-directed 5'-3' RNA polymerase activity
EggNOG OGsCOG2012@1,KOG3218@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01611,ko00000,ko00001,ko00002,ko03021,ko03400
Hectar predicted targeting categoryother localisation
Exons4
Model size402
Cds size402
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig89812.16477.1prot_H-elongata_contig89812.16477.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig89812 476..2244 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931298.3998265-CDS-H-elongata_contig89812:475..5231622931298.3998265-CDS-H-elongata_contig89812:475..523Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig89812 476..523 +
1691679778.8095813-CDS-H-elongata_contig89812:475..5231691679778.8095813-CDS-H-elongata_contig89812:475..523Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig89812 476..523 +
1622931298.422968-CDS-H-elongata_contig89812:1148..12831622931298.422968-CDS-H-elongata_contig89812:1148..1283Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig89812 1149..1283 +
1691679778.8219304-CDS-H-elongata_contig89812:1148..12831691679778.8219304-CDS-H-elongata_contig89812:1148..1283Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig89812 1149..1283 +
1622931298.4388714-CDS-H-elongata_contig89812:1660..17351622931298.4388714-CDS-H-elongata_contig89812:1660..1735Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig89812 1661..1735 +
1691679778.832288-CDS-H-elongata_contig89812:1660..17351691679778.832288-CDS-H-elongata_contig89812:1660..1735Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig89812 1661..1735 +
1622931298.4654691-CDS-H-elongata_contig89812:2100..22441622931298.4654691-CDS-H-elongata_contig89812:2100..2244Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig89812 2101..2244 +
1691679778.8425355-CDS-H-elongata_contig89812:2100..22441691679778.8425355-CDS-H-elongata_contig89812:2100..2244Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig89812 2101..2244 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig89812.16477.1

>prot_H-elongata_contig89812.16477.1 ID=prot_H-elongata_contig89812.16477.1|Name=mRNA_H-elongata_contig89812.16477.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=134bp
DDSVDQIFVFFPDDEKVGVKPIRSYSDKMLAEEVKKAIIVVKGGITPFAR
SAIMELCAQREVQVEDFKDAELMLDITEHTLVPQHTVLTPEQKSELLKRY
KLKDTQLPRIQATDPVARFYGMQVGKRSLVSTC*
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mRNA from alignment at H-elongata_contig89812:476..2244+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig89812.16477.1 ID=mRNA_H-elongata_contig89812.16477.1|Name=mRNA_H-elongata_contig89812.16477.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1769bp|location=Sequence derived from alignment at H-elongata_contig89812:476..2244+ (Himanthalia elongata Himel1 dioecious)
GACGATTCCGTTGACCAGATCTTCGTCTTCTTTCCGGATGACGAGAAGGT
GCGTGGTGCGTGTTTTTGCTGGAATCTGGTGGGTGCATTTCTAGCTTTTA
CTATCCTGAATCGTGCAATGCATGGTGAATTAGGAAGCAGGATAGAACAT
TCGGTTCCCGACTCGTACATGCTGGGAAGGTTTCCAGGATGGACACCTCA
ATATCCTCGATGGCAAGACGCAGAATCATCAACCTGACGAGATTGCCTGG
AAACCTTCCTAGCATCTACGAATCGAGAACCGAGTGCCCCATCCACCTTC
ACAGTTAAACATGCTTGTCTCCGCAACACAAAGAACAGTTTCAGGCATCT
GCTTTGGCGTAGCCCTGACCATCCGTGGGTTTGTTGCTTACTACCACGGC
AGCAACCACTATAGAATGGCAAACACCTCTACCCGCATGCTCTCCCGCCC
TGTTAACGTCAACACCTGTACGTCGTAATACCTTGTCGACACAAAAGTAG
CAAAATAAGTATAATAGTAATTTGAAATATCGCCGGTATCGCCGGTGGGT
TGACGAGAGGCGCTGCTGCCCAGCCCTACGTAGCCGCCCTCTCTCCCTGC
GCGTTGCCCATGGACTCGTACCACCCTGTCGAACCAAGGGAAACGTTCTC
ACGCAAACCCTTGCCGGTTGCAGGTGGGCGTGAAGCCTATCCGAAGCTAT
TCAGACAAGATGCTAGCGGAAGAGGTGAAGAAAGCGATCATTGTGGTGAA
AGGAGGCATCACGCCCTTCGCGCGGTCGGCCATCATGGAGCTCTGCGCAC
AGCGAGAGGTTCGCGCCCCCCTTCCCCCCCCCACACACACTTTCTTAGTA
AAACTCGTACGATTTTTTTCAACCCCTTGTCTTTGGTGACTCGGGCGGAA
AACGATGGTCGTTTTACGACAACACGGTCGCTTAGATGCGAGGTGCGCAA
CGATAAAGGGCGTCCCGCGTCGCATAAGGTATATGTCAGGCGAGATTTCA
ATTCAGCAACCGCGGCACGTATTCCTTGGTGAATACATCCAGAGGTACAA
CCGGTGCGTTCTTGTTTCCTGGTAGTTGCGCTTCTGTCGTTTAATCTCTC
GCTTGTAGGAGTACGGTGCCGTAGCTGTGTAACCTCGTCCGGATAGTCTC
CTCGCTGACGCAGTTGGGGTTGTCTTTTTCGACAGGTTCAGGTGGAGGAC
TTCAAGGACGCAGAATTGATGTTGGACATTACGGAGCACACCCTCGTACC
GCAGCACACGGTGGGTGGACGGGAGATGGAGAAGAGGCGATAGCCGTTGA
TCTAGTAGCCGGTCGGCAGTAACGATAAGGAGGCGTTCGTCCAACAGTAG
CTCTTAAGTTTTCATCGCTCTGAGTGCAATGGAATTCGCGGTCGGGTTGC
GTCGCTCTCACGCGGACGGCGATGAGAGTTCTGATTCAACACGTGTTTTT
CCGATAAAACAACACGTCTATCGCAGTACACAAGAATCGCCTGGAGTGCG
CGATATCGTTTCTCTGCTCGTTGCGAGAACATTGACGACGCGCGCGAATC
CGGTGCGATATGTTCGCGCTCTTGCATCTCTCGCCCGACGACTGGATGGC
GCCCCCGGGGCCGGTCGTGTTGAAGGTGCTCACCCCCGAACAGAAGTCGG
AACTGTTGAAGAGATATAAGCTCAAGGACACCCAACTGCCCCGGATACAG
GCTACAGACCCGGTTGCGCGATTTTACGGCATGCAGGTGGGGAAAAGATC
TCTAGTGTCGACGTGCTGA
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Coding sequence (CDS) from alignment at H-elongata_contig89812:476..2244+

>mRNA_H-elongata_contig89812.16477.1 ID=mRNA_H-elongata_contig89812.16477.1|Name=mRNA_H-elongata_contig89812.16477.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=804bp|location=Sequence derived from alignment at H-elongata_contig89812:476..2244+ (Himanthalia elongata Himel1 dioecious)
GACGATTCCGTTGACCAGATCTTCGTCTTCTTTCCGGATGACGAGAAGGA
CGATTCCGTTGACCAGATCTTCGTCTTCTTTCCGGATGACGAGAAGGTGG
GCGTGAAGCCTATCCGAAGCTATTCAGACAAGATGCTAGCGGAAGAGGTG
AAGAAAGCGATCATTGTGGTGAAAGGAGGCATCACGCCCTTCGCGCGGTC
GGCCATCATGGAGCTCTGCGCACAGCGAGAGGTGGGCGTGAAGCCTATCC
GAAGCTATTCAGACAAGATGCTAGCGGAAGAGGTGAAGAAAGCGATCATT
GTGGTGAAAGGAGGCATCACGCCCTTCGCGCGGTCGGCCATCATGGAGCT
CTGCGCACAGCGAGAGGTTCAGGTGGAGGACTTCAAGGACGCAGAATTGA
TGTTGGACATTACGGAGCACACCCTCGTACCGCAGCACACGGTTCAGGTG
GAGGACTTCAAGGACGCAGAATTGATGTTGGACATTACGGAGCACACCCT
CGTACCGCAGCACACGGTGCTCACCCCCGAACAGAAGTCGGAACTGTTGA
AGAGATATAAGCTCAAGGACACCCAACTGCCCCGGATACAGGCTACAGAC
CCGGTTGCGCGATTTTACGGCATGCAGGTGGGGAAAAGATCTCTAGTGTC
GACGTGCTGAGTGCTCACCCCCGAACAGAAGTCGGAACTGTTGAAGAGAT
ATAAGCTCAAGGACACCCAACTGCCCCGGATACAGGCTACAGACCCGGTT
GCGCGATTTTACGGCATGCAGGTGGGGAAAAGATCTCTAGTGTCGACGTG
CTGA
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