mRNA_H-elongata_contig12148.1646.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig12148.1646.1 vs. uniprot
Match: D7G8U5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8U5_ECTSI) HSP 1 Score: 327 bits (837), Expect = 2.080e-94 Identity = 210/422 (49.76%), Postives = 255/422 (60.43%), Query Frame = 2
Query: 302 ISEYELQRLERIRKNQAFMNALGLGASRPLAPPSSISXXXXXXXXXXKM-GEPGGRPKSRAA-MMPLRRSTRAKRDKPVDDIESNQEVLFASRVPDPED----ESQPVLEEINFDDSTVLKYLCG-EADDEQGDGQDSA---------------TAEAISTSKTTSEGARVMGMRALELDQPLSASGLSTIYSMHFRDGGGSESASPALLAAGGKGGVVALFSARQLRVPTTRSQSGPRDDEDD-------------KRTLMIFKAHKGWVSSVRFLGGGEGGGGGVSVGGYRLLSSANDSVVKLWDISKSDRGLPRLLCTANDLHPTSKGIFSMDAHGTLVATGSKDATVAIASLRPAGLAVDRVLGDPGGSEAFHTKVIKGVSLRDHTTVASCGDDSSVCVSDVRVSTRSAVSSRLNSVH 1462
IS+YEL+RLERI++NQAFM LGL ++PLA P++ S K P R + +AA ++P+RRS R + + VD E Q + +R E +P+LEEI+FDDSTVLKYLCG EA+ + G G DS+ TA ++ + S GA V+G+R ++ D PLSASGLSTIY+MHF G+ +A +RTLM FKAHKGWVS+VRFL EGGG G VGG RLL+SANDSVVKLWD SK RG PRLL T +DLHPT KGIF+MD+HGT VATGSKD TVAIASLRP G+ DRVLGDPGGSEAFH KV+KGVSLRD TVASCGDDS+V VSD+R S+ VS RL+ VH
Sbjct: 319 ISQYELERLERIKRNQAFMATLGLATAKPLAAPAATSSEGTKGRNKNKKRSRPVSRSREKAATVVPVRRSARGRGAEAVDYNEDKQAINAVARAXXXXXXXXXEPEPILEEIDFDDSTVLKYLCGTEANVKDGGGNDSSAEAPNTAXXXXXXXQTAATLTGTGAASAGATVVGLRVIDPDDPLSASGLSTIYTMHFC---GARAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERTLMNFKAHKGWVSAVRFL---EGGGAGAGVGGCRLLTSANDSVVKLWDTSKQHRGTPRLLSTMDDLHPTRKGIFAMDSHGTRVATGSKDTTVAIASLRPTGIERDRVLGDPGGSEAFHEKVVKGVSLRDENTVASCGDDSNVRVSDLRSSSSVGVSQRLDGVH 734
BLAST of mRNA_H-elongata_contig12148.1646.1 vs. uniprot
Match: A0A6H5KMN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMN1_9PHAE) HSP 1 Score: 321 bits (822), Expect = 2.050e-93 Identity = 211/422 (50.00%), Postives = 258/422 (61.14%), Query Frame = 2
Query: 302 ISEYELQRLERIRKNQAFMNALGLGASRPLAPPSSI-SXXXXXXXXXXKMGEPGGRPKSRAA-MMPLRRSTRAKRDKPVDDIESNQEV----LFASRVPDPEDESQPVLEEINFDDSTVLKYLCG-EADDEQGDGQDSATAEAIST---------------SKTTSEGARVMGMRALELDQPLSASGLSTIYSMHFRDGGGSESASPALLAAGGKGGVVALFSAR------------QLRVPTTRSQ-SGPRDDEDDKRTLMIFKAHKGWVSSVRFLGGGEGGGGGVSVGGYRLLSSANDSVVKLWDISKSDRGLPRLLCTANDLHPTSKGIFSMDAHGTLVATGSKDATVAIASLRPAGLAVDRVLGDPGGSEAFHTKVIKGVSLRDHTTVASCGDDSSVCVSDVRVSTRSAVSSRLNSVH 1462
IS+YEL+RLERI++NQAFM LGL ++PLA ++ S P R + +A+ ++P+RRS RA+ + VD E Q + A E +P+LEEI+FDDSTV KYLCG EA+D+ G G DS+ AEA + + S GA V+G+R ++ D PLSASGLSTIY+MHF G+++A Q + S +G D+RTLM FKAHKGWVS+VRFL EGGG G VGG RLL+SANDSVV LWD SK RG PRLL T +DLHPT KGIF+MD+HGT VATGSKD TVAIASL P G+ DRVLGDPGGSEAFH KV+KGVSLRD TVASCGDDS+V VSD+R S+ VS RL+ VH
Sbjct: 197 ISQYELERLERIKRNQAFMATLGLATAKPLAASAATWSEGTKGRSQNKNRSRPVSRSREKASTVVPVRRSARARGAEAVDYNEDKQAINAIATAAXXXXXXXXEPEPILEEIDFDDSTVFKYLCGTEANDKDGGGNDSS-AEAPNXXXXXXXXXXXXXXXXTGAASAGATVVGLRVIDPDYPLSASGLSTIYTMHFC---GAKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQTDHLESHGNGKXXXXXDERTLMNFKAHKGWVSAVRFL---EGGGAGAGVGGCRLLTSANDSVVNLWDTSKQHRGSPRLLSTMDDLHPTRKGIFAMDSHGTRVATGSKDTTVAIASLGPTGIEHDRVLGDPGGSEAFHEKVVKGVSLRDENTVASCGDDSNVRVSDLRSSSSFGVSQRLDGVH 611
BLAST of mRNA_H-elongata_contig12148.1646.1 vs. uniprot
Match: A0A835ZGB7_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGB7_9STRA) HSP 1 Score: 209 bits (532), Expect = 2.480e-54 Identity = 171/413 (41.40%), Postives = 215/413 (52.06%), Query Frame = 2
Query: 302 ISEYELQRLERIRKNQAFMNALGLGASRP--LAPPSSISXXXXXXXXXXKMGEPGGRPKSRAAMMPLRRSTRAKRD--KPVDDIESNQEVLFASRVPDPEDESQPVLEEINFDDSTVLKYLCGEADDEQGDGQDSATAEAISTSKTTSEGARVMGMRALELDQPLSASGLSTIYSMHFRDGGGSESASPA-------LLAAGGKGGVVALFSARQLRVPTTRSQSGPRDDEDDKRTLMIFKAHKGWVSSVRFLGGGEGGGGGVSVGGYR-------------LLSSANDSVVKLWDISKSDRGLPRLLCTANDLHPTSKGIFSMDAHGTLVATGSKDATVAIASL--RPAGLAVDRVLGDPGGSEAFHTKVIKGVSLRDHTTVASCGDDSSVCVSDVRVSTRSAVSSRLNSVH 1462
+S +ELQRL I +N+AF+ LG+ +P L P + GG P RRSTR + K V D E+ V+ + Q L+EI +DDS V KY + DE G A G V G++ + L ASGL+ IYSMHF GG++S +P LLAAGGKGG+VALF RV S +G D +D +LM F+AHKGWVS+V+F E GG V VGG R LLSS ND VVKLWD+S+ +G P L+ A DLH SKGIFSM H ++AT SKD TVAI+ L G+A+DRVLGD +E H VIK V LRD TTVASCGDD+SV V D+R + ++ L VH
Sbjct: 88 LSPFELQRLANIERNKAFLATLGIDKCKPQPLKPKAPTGAGKRRKGARGVGAGAGG-------SAPTRRSTRLQGGGGKVVYD-ENALHVVEEGECAAIQQVQQ--LKEIEYDDSDVFKYSLDSSTDEAG------VASGADGDAYIGNGREVKGVQLAHPHRTLQASGLTAIYSMHFS--GGTDSNAPCGSTPQLGLLAAGGKGGIVALF-----RVAPAVSLAGDADQQD--ASLMTFRAHKGWVSAVQFA---ERGGATVEVGGGRDVEAGGRGGRALLLLSSGNDGVVKLWDVSRQSKGTPLLVAQACDLH--SKGIFSMHMHRGVIATASKDRTVAISKLVGDGRGIALDRVLGD---TETLHAGVIKDVQLRDATTVASCGDDASVRVCDIRAARGYYIAVGLEDVH 467
BLAST of mRNA_H-elongata_contig12148.1646.1 vs. uniprot
Match: A0A1V9ZB08_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZB08_9STRA) HSP 1 Score: 109 bits (272), Expect = 2.480e-21 Identity = 113/390 (28.97%), Postives = 174/390 (44.62%), Query Frame = 2
Query: 290 PNEEISEYELQRLERIRKNQAFMNALGLGASRPLAPPSSISXXXXXXXXXXKMGEPGGRPKSRAAMMPLRRSTRAKRDKPVDDIESNQEVLFASRVPDPEDESQPVLEEINFDDSTVLKYLCGEADDEQGDGQDSATAEAISTSKTTSEGARVMGMRALELDQPLSASGLSTIYSMHFRDGGGSESASPALLAAGGKGGVVALFSARQLRVPTTRSQSGPRDDEDDKRTLMIFKAHKGWVSSVRFLGGGEGGGGGVSVGGYRLLSSANDSVVKLWDISKSDRGLPRLLCTANDLHPTSKGIFSMDA---HGTLVATGSKDATVAIASLRPAGLAVDRVLGDPGGSEAF--HTKVIKGVSLR--DHTTVASCGDDSSVCVSDVRVSTRSAV 1438
P +E+S+YE QRL +I++N F+ +LGL A++ S I+ K R +A++ S R + KP + + + +S +S V + FDDSTV KY+C + + A +T ++ RV L IY++ +++S LLA GG G V++++ + S P L F+AHKGWVS RF+ L+++AND+ VKLWD++++ PR + NDLH SKGIFS D + T SKD +V + + P G A+ R+ AF H V+K V D ASCG+D +V V D+RV +++V
Sbjct: 38 PQDELSDYERQRLAKIQENAVFLASLGLAAAK-----SGITRPAPT-----KXXXXXXRSAPNSAVVTREYSLRCRGPKPPTPLLPTETLTPSSS------QSAAVADAATFDDSTVYKYICSRDESSPQQAASFSAGAASQAFRTETQWDRVDPQ-------------LKRIYAI--------DASSAGLLATGGHLGFVSVYAD-----DVGAAGSAP---------LQSFQAHKGWVSGARFV---------PHPTQTLLITTANDTFVKLWDLNQASGATPRQVAATNDLH--SKGIFSFDLATDDAPQLLTSSKDRSVVHSRIMPDG-AIQRL-------SAFEDHASVVKCVRFAAGDANIFASCGNDRAVIVRDIRVPAKTSV 357
BLAST of mRNA_H-elongata_contig12148.1646.1 vs. uniprot
Match: A0A7S4L7F4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4L7F4_9EUKA) HSP 1 Score: 94.0 bits (232), Expect = 1.280e-18 Identity = 66/180 (36.67%), Postives = 94/180 (52.22%), Query Frame = 2
Query: 866 AAGGKGGVVALFSARQLRVPTTRSQSGPRDDEDDKRTLMIFKAHKGWVSSVRFLGGGEGGGGGVSVGGY-RLLSSANDSVVKLWDISK---SDRGL-PRLLCTANDLHPTSKGIFSMDAHGTLVATGSKDATVAIASLRPAGLAVDRVLGDPGGSEAFHTKVIKGVSLRDHTTVASCGDD 1390
AAGG G VALFS P P+++E++ ++ +KAHKGWVS+VRF+ S Y +LL+S+ND V LWD++K + RG+ P+ LC ++LH S GIFSMD + T SKD +V ++SL G+ G V+K + RD S G+D
Sbjct: 1 AAGGHQGRVALFSCEGALNP-------PQEEEEETPPILSWKAHKGWVSTVRFIS---------SSSSYSKLLTSSNDGCVTLWDVTKQTRNSRGVEPKKLCCNSNLH--SSGIFSMDVRNGKIITSSKDGSVVLSSLSDDGITSISSFTSQGC-------VVKSANFRDDFVFCSAGND 155
BLAST of mRNA_H-elongata_contig12148.1646.1 vs. uniprot
Match: T0SGQ0_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0SGQ0_SAPDV) HSP 1 Score: 98.2 bits (243), Expect = 1.780e-17 Identity = 107/381 (28.08%), Postives = 164/381 (43.04%), Query Frame = 2
Query: 302 ISEYELQRLERIRKNQAFMNALGLGASRPLAPPSSISXXXXXXXXXXKMGEPGGRPKSRAAMMPLRRSTRAKRDKPVDDIESNQEVLFASRVPDPEDESQPVLEEINFDDSTVLKYLCGEADDEQGDGQDSATAEAISTSKTTSEGARVMGMRALELDQPLSASGLSTIYSMHFRDGGGSESASPALLAAGGKGGVVALFSARQLRVPTTRSQSGPRDDEDDKRTLMIFKAHKGWVSSVRFLGGGEGGGGGVSVGGYRLLSSANDSVVKLWDI--SKSDRGLPRLLCTANDLHPTSKGIFSMD-AHGTLV----ATGSKDATVAIASLRPAGLAVDRVLGDPGGSEAFHTKVIKGVSL--RDHTTVASCGDDSSVCVSDVR 1417
+ YE QRL ++++N A++ LGL +++ +S+ P P LRR T + AS V +P S P + ++DS+V KY+C A + G SA++ A +T + R+ L IYSM ++P LLA GG G V+++ A S + P L F+AH GWVSSVR + L++++NDS VK+WD+ + S+ G P+ + N+LH + GIFS+D +H + V T SKD +V ++ L PAG+ + H V+K V L D ASCG+D +V + D R
Sbjct: 130 VCAYEKQRLLKMQQNAAYLATLGLASTK-----TSLRDAAKVVPAKPARKRPPTAPALPTRTYALRRRT----------------LPGASSVNEPSP-SPPPSPQATYEDSSVHKYMCSLAPNAARQGDASASSTATLVFQTVAAHDRMDAH-------------LKKIYSMDM--------STPGLLATGGHLGFVSVYGA-----DVVASGAAP---------LQSFRAHGGWVSSVRLF---------ATASASLLVTASNDSYVKVWDLHQTNSNDGCPKEVTATNELHRS--GIFSLDLSHDSQVDARLVTSSKDQSVVLSRLTPAGIVQTEA------TYQDHAGVVKCVRLARHDRNVFASCGNDRAVYIRDTR 436
BLAST of mRNA_H-elongata_contig12148.1646.1 vs. uniprot
Match: A0A804IRQ1_MUSAM ((wild Malaysian banana) hypothetical protein n=2 Tax=Musa TaxID=4640 RepID=A0A804IRQ1_MUSAM) HSP 1 Score: 97.1 bits (240), Expect = 2.880e-17 Identity = 111/380 (29.21%), Postives = 164/380 (43.16%), Query Frame = 2
Query: 296 EEISEYELQRLERIRKNQAFMNALGLGASRPLAPPSSISXXXXXXXXXXKMGEPGGRPKSRAAMMPLRRSTRAKRDKPVDDIESNQEVLFASRVPDPEDESQPVLEEINFDDSTVLKYLCGEADDEQGDGQDSATAEAISTSKTTSEGARVMGMRALELDQPLSASGLSTIYSMHFRDGGGSESASPALLAAGGKGGVVALFSARQLRVPTTRSQSGPRDDEDDKRTLMIFKAHKGWVSSVRFLGGGEGGGGGVSVGGYRLLSSANDSVVKLWDISKSDRGL----PRLLCTANDLHPTSKGIFSMDAHGTLVATGSKDATVAIASLRPAG-LAVDRVLGDPGGSEAFHTKVIKGVSLRD-HTTVASCGDDSSVCVSDVR 1417
E S+YE R E IR+NQ F+ LG+ ++ +A + + RP A+ PLRRS+R KR P D + E A +PDP DS+V +Y+C DDE+ + A + +T G RV G + L+ IYS+ S L+AAGG G ++++ S D E LM +K WVS V+F V L+SS+ND + +WD+ K L P ++ + +LH + G++SMD +AT SKD++V ++ L PAG L +R + H+ VI+GV D +A CG D +CV D R
Sbjct: 39 EAASDYERIRRETIRRNQEFLQKLGIASATAIAHKNQHTSSKRRP-----------RPPP-ASSFPLRRSSRNKR--PPHDAPATSEDP-APELPDP-----------GLIDSSVFQYVC---DDEEAPLRPGAHLAESPSWSSTIVGFRVSGKAFRDPS-------LARIYSIDVC----SSKKDRFLVAAGGHRGFISVYGGEWGDCENINS-----DGEMMDGPLMSWKGSPSWVSGVKF----------VEDNPMLLVSSSNDGAIVVWDLKKQPSSLSSWSPPVVAKSTELH--TGGVYSMDRFSCWIATASKDSSVGVSRLTPAGELVAERNI------TGHHSGVIRGVCFGDGKERLADCGVDGRICVLDPR 355
BLAST of mRNA_H-elongata_contig12148.1646.1 vs. uniprot
Match: A0A830HER1_9CHLO (Uncharacterized protein n=2 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HER1_9CHLO) HSP 1 Score: 89.4 bits (220), Expect = 8.540e-15 Identity = 109/383 (28.46%), Postives = 165/383 (43.08%), Query Frame = 2
Query: 302 ISEYELQRLERIRKNQAFMNALGLGASRPLAPPSSISXXXXXXXXXXKMGEPGGRPK-SRAAMMPLRRSTRAKRDKPVDDIESNQEVLFASRVPDPEDESQPVLEEINFDDS-TVLKYLCGEADDEQGDGQDSATA---EAISTSKTTSEGARVMGMRALELDQPLSASGLSTIYSMHFRDGGGSESASPALLAAGGKGGVVALFSARQLRVPTTRSQSGPRDDEDDKRTLMIFKAHKGWVSSVRFLGGGEGGGGGVSVGGYRLLSSANDSVVKLWDIS--KSDRGLPRLLCTANDLHPTSKGIFSMDAHG---TLVATGSKDATVAIASLRPAGLAVDRVLGDPGGSEAFHTKVIKGVSLRDHTTVASCGDDSSVCVSDVRV 1420
+SEYEL+RLER+R+N+ +M LG+ A PS+ + R SR + P+R+S R V +++++ + D + + Q EE + D+ TV++YL Q + SA A +AI+ G G R+ EL A G + YS+ A AL+ A G GG V +F+ D ++ L+ +KAH GWVS VR L + LL+S+ND V LW + ++D L + +H S GIFSMD + AT +KD ++ ++S + V D H V K V RD + S G+D SV + DVR+
Sbjct: 31 LSEYELERLERMRRNEEYMRKLGIVPMASAAQPSAFISSAKPPDAQKRWRTSQRRAAASRESAEPVRKSRR------VANLKADTAIYAEFAEEDEQAQVQQQQEEPAYVDACTVMRYLADAPPAAQAEASSSAAAGHGKAIA-------GYTTHGARSYEL-----AKGCKS-YSVD---------AHGALVTAAGHGGFVHVFAT------------------DKEQPLLYYKAHTGWVSEVRLLADSK-----------SLLTSSNDGAVSLWSLESVRADDSLTPERKMTSKVHGGS-GIFSMDIYEQNCAATATAAKDGSIMVSSFASSDYNVTWQRNDA------HAGVAKSVRWRDANVMGSAGNDGSVRLWDVRM 349
BLAST of mRNA_H-elongata_contig12148.1646.1 vs. uniprot
Match: A0A448ZQL5_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZQL5_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 2.880e-14 Identity = 139/472 (29.45%), Postives = 195/472 (41.31%), Query Frame = 2
Query: 290 PNEE-ISEYELQRLERIRKNQAFMNALGLGASRPLAPPSSISXXXXXXXXXXKMGEPGGRPKSRAAMMPLRRSTRAK------RDKPVDDIESNQEVLFASRVPDPEDESQPVLEEIN--FDDSTVLKY-----LCGEADDEQGDGQDSA--TAEAISTSKTTSEGARVMGMRALELDQPLSAS------------GLSTIYSMHFRDGGGSESASPALLAAGGKGGVVALFSARQLRVPTTRSQSGPRDDEDDKRTLMIFKAHKG-WVSSVRFLGGGEGGGGGVSV------GGYRLLSSANDSVVKLWDIS--KSDRGLPRLLC-TANDLHPTSKGIFSMDA-------HGTLVATGSKDATVAIASLRPAGLAVDRVLGDPGGSEAFHTKVIKGVSLRDHTT--VASCGDDSSVCVSDVRVSTRSAVSSRLNSVHP*SSSTFGDWTPPCMFSAAIARTLSPGETVFARR 1564
PNE+ +SEYE RL I +N A + ALGL LAP +S + PLRRS+R + R P+DD N ++ FA+ + E + P LEE + S +L+Y L E + G + TA + T + + + + L S S GLS IYS+ F S L GK G++AL+ Q P + G D ++ +KAH G W++ RF+ + SV RLL++ ND V LWD+S + G PRLL T + H GIF MDA T++ATGSKD TVA+++L +A P FHT + V L+D ++ +AS DD V V D R V+ R+ H S D PC + L P V+ RR
Sbjct: 214 PNEDGLSEYEKLRLRNIERNNARLAALGL-----LAPSDGLSKPKKTASTRRARPPRKTPAVHKTRQQPLRRSSRNRNPSKGSRPAPLDD---NSDLNFAAI--NAETSNAPELEEEEELYTVSPLLQYEMERHLGEEKRNSNPSGLEPTDXTASMDTPXGTLPKNSSAVKKKTLAAPPSYSTSLAVSGTRFLPPKGLSAIYSLDFWR----NKRSSRWLVGAGKAGMIALWDTSQEVDPCDANDCG-NDLAAFVDPVLSWKAHSGRWIADARFVSAPKT----ASVETKTENAPSRLLTAGNDGTVCLWDLSAVSASNGAPRLLQRTGKEYH--GSGIFCMDAGLPDRAGSDTVIATGSKDKTVAVSTL--GSIAGGGASALPVWRSRFHTAKVGAVRLKDSSSPLLASASDDGIVAVHDHRXEGSXPVA-RIGDAHDRPHSVVWD---PCHEFVLVTAGLDPVVRVWDRR 658
BLAST of mRNA_H-elongata_contig12148.1646.1 vs. uniprot
Match: K0RV75_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RV75_THAOC) HSP 1 Score: 84.7 bits (208), Expect = 2.150e-13 Identity = 87/277 (31.41%), Postives = 128/277 (46.21%), Query Frame = 2
Query: 569 SRVPDPEDESQPVLEEINFDDSTVLKY-LCGEADDEQGDGQDSATAEAISTSKTTSEGARVMGMRALELDQPLSASGLSTIYSMHFR--DGGGSESASPALLAAGGKGGVVALFSARQLRVPTTRSQSGPRDDEDDKRTLMIFKAHKG-WVSSVRFLGGGEG---GGGGVSVGGYRLLSSANDSVVKLWDISKSD--RGLPRLLC-TANDLHPTSKGIFSMDAH-----GTLVATGSKDATVAIASLRPAGLAVDRVLGDPGGSEAFHTKVIKGVSL 1354
S VP +E++ E F S + +Y + +G+G+ + T + G + L+ P SGLS +Y++ FR D GG S + GGK G+V+L+ + S P +D ++ FK H G W++ RF+ G G G V +GG LL++ ND V WD++ + G PRLL + LH S GIFSMD + G L+ATGSKD T+A+ SL D + G P FH+ + VS
Sbjct: 63 SAVPPQREEAEAEPEPEEFTVSPLFEYQMAAYVARMEGEGETTRRQAEPETPQQKGGGITTLVPTGTRLNPP---SGLSAVYTLQFRPDDQGGRPSP---WIVGGGKAGIVSLWDS-----------SRPANDHGVVDPVVSFKGHSGRWIADARFVPAGRGPASSSGAVGLGG--LLTAGNDGTVCHWDLASTSVKTGAPRLLGQSGKGLH--SGGIFSMDVYLGEGGGVLIATGSKDKTLAVTSL-------DGLDGAPAWRSDFHSAKVGCVSF 311 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12148.1646.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig12148.1646.1 >prot_H-elongata_contig12148.1646.1 ID=prot_H-elongata_contig12148.1646.1|Name=mRNA_H-elongata_contig12148.1646.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=474bp MGTFRCERGGGKVLDKGSRTVGDDFSGRDSESRMDEAAGADKSIKAGGHWback to top mRNA from alignment at H-elongata_contig12148:4032..7896- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig12148.1646.1 ID=mRNA_H-elongata_contig12148.1646.1|Name=mRNA_H-elongata_contig12148.1646.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3865bp|location=Sequence derived from alignment at H-elongata_contig12148:4032..7896- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig12148:4032..7896- >mRNA_H-elongata_contig12148.1646.1 ID=mRNA_H-elongata_contig12148.1646.1|Name=mRNA_H-elongata_contig12148.1646.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2844bp|location=Sequence derived from alignment at H-elongata_contig12148:4032..7896- (Himanthalia elongata Himel1 dioecious)back to top |