prot_H-elongata_contig89639.16461.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig89639.16461.1
Unique Nameprot_H-elongata_contig89639.16461.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length62
Homology
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BLAST of mRNA_H-elongata_contig89639.16461.1 vs. uniprot
Match: D7G1J7_ECTSI (Ubiquinone Biosynthesis Monooxygenase COQ6 (C-terminal region) Ubiquinone Biosynthesis Monooxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1J7_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 4.240e-13
Identity = 37/63 (58.73%), Postives = 48/63 (76.19%), Query Frame = 0 
Query:    2 IQVWDDRGPGFLHFDGETPG---EALGYVAEHGLLHSTLFQRVKDLEEAEGKDAVELTSPAQV 61
            +QVWDDRG G L FDGE  G    ALG+++EHG++HS+LF+RV++LE A+G    ELT PAQV
Sbjct:  162 MQVWDDRGAGHLRFDGEGKGGKTTALGFISEHGVIHSSLFERVRELE-ADG--LAELTCPAQV 221
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BLAST of mRNA_H-elongata_contig89639.16461.1 vs. uniprot
Match: A0A6H5KUH3_9PHAE (FAD_binding_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUH3_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 4.960e-9
Identity = 26/48 (54.17%), Postives = 36/48 (75.00%), Query Frame = 0 
Query:    1 NIQVWDDRGPGFLHFDGETPG---EALGYVAEHGLLHSTLFQRVKDLE 45
            N +VWDDRG G L FDGE  G    ALG+++EH ++HS+LF+RV++ E
Sbjct:   40 NGKVWDDRGAGHLRFDGEGKGGRTAALGFISEHSVIHSSLFERVREFE 87
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig89639.16461.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1J7_ECTSI4.240e-1358.73Ubiquinone Biosynthesis Monooxygenase COQ6 (C-term... [more]
A0A6H5KUH3_9PHAE4.960e-954.17FAD_binding_3 domain-containing protein n=1 Tax=Ec... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036188FAD/NAD(P)-binding domain superfamilyGENE3D3.50.50.60coord: 1..61
e-value: 4.7E-7
score: 31.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig89639contigH-elongata_contig89639:531..716 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig89639.16461.1mRNA_H-elongata_contig89639.16461.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig89639 531..716 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig89639.16461.1 ID=prot_H-elongata_contig89639.16461.1|Name=mRNA_H-elongata_contig89639.16461.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=62bp
NIQVWDDRGPGFLHFDGETPGEALGYVAEHGLLHSTLFQRVKDLEEAEGK
DAVELTSPAQV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036188FAD/NAD-bd_sf