prot_H-elongata_contig896.16458.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig896.16458.1
Unique Nameprot_H-elongata_contig896.16458.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length190
Homology
BLAST of mRNA_H-elongata_contig896.16458.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 1.740e-42
Identity = 86/192 (44.79%), Postives = 116/192 (60.42%), Query Frame = 0
Query:    1 MVYPNPQAVCASVAMDFPKGLGKG--YRLVADFPPVNGQCELVPGPMIDPEIEGEKYAGTVAFCTMDCLQGYWRCPLAKEAREYFTFVTRDGLYTPTRVPQGIMNATSYFQGMMMEVLGDLVGRACLIYVDNVKVIGRSVEKLIANLRSVLLWFMERELFLAAHKLVLFATEVKWCSKLYSGTVVRHDPEHV 190
            +VY N QA+ AS  M  PK  G    YR V DF  VN Q E  PGPM D E + ++ +    + ++D LQGYW  PLA EA+E FT +   GLY+P RVPQG++NATSY+QG M  +L DL    C+++VD++   G + E L+  L  +L  F    LF+AAHK   + T VKWC K+YS  V+ HD + +
Sbjct:  686 LVYVNLQAIWASAIMLTPKRSGDKVTYRFVGDFRAVNRQIEKSPGPMPDLEADMQRLSRATCYGSLDMLQGYWGMPLAPEAQEIFTMIGPGGLYSPERVPQGVLNATSYYQGTMNSILHDL---NCIVWVDDIVYWGETEEDLLNTLDLILARFEHHGLFVAAHKCTFYTTSVKWCGKVYSKGVIEHDRDRL 874          
BLAST of mRNA_H-elongata_contig896.16458.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 1.330e-40
Identity = 87/190 (45.79%), Postives = 112/190 (58.95%), Query Frame = 0
Query:    1 MVYPNPQAVCASVAMDFPKGLGKGYRLVADFPPVNGQCELVPGPMIDPEIEGEKYAGTVAFCTMDCLQGYWRCPLAKEAREYFTFVTRDGLYTPTRVPQGIMNATSYFQGMMMEVLGDLVGRACLIYVDNVKVIGRSVEKLIANLRSVLLWFMERELFLAAHKLVLFATEVKWCSKLYSGTVVRHDPEHV 190
            +V+ N QAV AS AM  PK    GYRLV+DF   N Q E VPG M +PE    + +    + ++D LQ YW+CPLA EA+E FT  T  GLYTP RVPQGI+NATSYFQ  +  +L    G  C ++VD+V   G   + L+  L  +L       L++AAHK   F T + WC K+YS   V HDPE +
Sbjct:  788 LVFLNMQAVWASAAMATPKK--GGYRLVSDFRAANKQVEKVPGVMPNPEASIAQLSAAKFYGSLDLLQWYWQCPLAPEAQEIFTIATPGGLYTPKRVPQGILNATSYFQATLTRILD---GLNCFVWVDDVVYWGMDKDDLLDTLDLILDRLEGAGLYVAAHKCTFFETSITWCGKVYSEGQVEHDPERL 972          
BLAST of mRNA_H-elongata_contig896.16458.1 vs. uniprot
Match: A0A6A3J5U5_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3J5U5_9STRA)

HSP 1 Score: 137 bits (346), Expect = 3.530e-34
Identity = 75/191 (39.27%), Postives = 110/191 (57.59%), Query Frame = 0
Query:    1 MVYPNPQAVCASVAMDFPK-GLGKGYRLVADFPPVNGQCELVPGPMIDPEIEGEKYAGTVAFCTMDCLQGYWRCPLAKEAREYFTFVTRDGLYTPTRVPQGIMNATSYFQGMMMEVLGDLVGRACLIYVDNVKVIGRSVEKLIANLRSVLLWFMERELFLAAHKLVLFATEVKWCSKLYSGTVVRHDPEHV 190
            +V+ N Q+  A  A+  PK GLG+ +R   D+ PVN +   + G M +  +   K  G   F T D  +G+W+  L  + +E+F+F+T D +YTPTRVPQG  ++  +FQ  M EV  D++    LI+VD++ V  R+VE+ +A L+       +  L L A K  LFA E+ WC +L  GT VRHDPE V
Sbjct:  153 LVFRNNQSRWACAAIPVPKKGLGEEFRCANDYRPVNKRSIAIAGAMPNLLVVIAKVKGAYYFATFDLFKGFWQLMLHPDCQEFFSFITNDTVYTPTRVPQGATDSPIHFQNQMQEVFRDMLYDNVLIWVDDIVVFARTVEEFLAVLKKFFERLRQYGLKLNAKKSCLFAREISWCGRLIDGTGVRHDPERV 343          
BLAST of mRNA_H-elongata_contig896.16458.1 vs. uniprot
Match: A0A6A3W457_9STRA (Reverse transcriptase domain-containing protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3W457_9STRA)

HSP 1 Score: 128 bits (322), Expect = 1.160e-31
Identity = 69/190 (36.32%), Postives = 106/190 (55.79%), Query Frame = 0
Query:    1 MVYPNPQAVCASVAMDFPKGLGKGYRLVADFPPVNGQCELVPGPMIDPEIEGEKYAGTVAFCTMDCLQGYWRCPLAKEAREYFTFVTRDGLYTPTRVPQGIMNATSYFQGMMMEVLGDLVGRACLIYVDNVKVIGRSVEKLIANLRSVLLWFMERELFLAAHKLVLFATEVKWCSKLYSGTVVRHDPEHV 190
            +V  N Q+  A  A+   K     +R+  D+ PVN     + G  ++  +  E   G+  F   D  +G+W+ PL   +RE F+FVT DG++TPTRVPQG  ++  +FQ  M +VL DL+ R+ L+++D+V +  R+  + + NL +      +R+L L A K  LFA  VKWC K+  G  V HDPE +
Sbjct:  205 LVERNTQSRWACPALPVAKRGTDEFRITIDYRPVNRLTVPLAGASLNLAVVTESVRGSYGFGAFDFHKGFWQMPLHPNSREIFSFVTEDGVFTPTRVPQGASDSAVHFQAQMNDVLKDLLFRSVLVWIDDVLLYARTAGEYLENLSAFFAILRQRKLKLNARKCKLFAKRVKWCGKVIDGEGVEHDPERL 394          
BLAST of mRNA_H-elongata_contig896.16458.1 vs. uniprot
Match: A0A0G4J790_PLABS (Reverse transcriptase domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J790_PLABS)

HSP 1 Score: 128 bits (322), Expect = 5.560e-31
Identity = 72/190 (37.89%), Postives = 104/190 (54.74%), Query Frame = 0
Query:    1 MVYPNPQAVCASVAMDFPKGLGKGYRLVADFPPVNGQCELVPGPMIDPEIEGEKYAGTVAFCTMDCLQGYWRCPLAKEAREYFTFVTRDGLYTPTRVPQGIMNATSYFQGMMMEVLGDLVGRACLIYVDNVKVIGRSVEKLIANLRSVLLWFMERELFLAAHKLVLFATEVKWCSKLYSGTVVRHDPEHV 190
            ++Y N  +  AS  +   K  GKGYRL  D   VN +      PM + E    K AG   F T+D  +G+W  P+AKE +E F+F+T DG+YTPTR  QG  N+   FQ  + ++  D+     LI++D++    ++ + L+  L  VL    ER L     K VLFA E+KWC ++YS   +RHDPE +
Sbjct:  336 LIYLNMNSRWASPVLVVKKPNGKGYRLCVDLRQVNSRTVPTAWPMPNIEAASRKLAGMTCFFTIDAHKGFWLMPIAKECQEIFSFMTDDGVYTPTRSIQGATNSALQFQARIGKIFDDMKDHL-LIWIDDLLGFAKTEDILLHQLARVLERARERNLKFNPDKCVLFARELKWCGRIYSRDGIRHDPERI 524          
BLAST of mRNA_H-elongata_contig896.16458.1 vs. uniprot
Match: A0A6A3GQ28_9STRA (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GQ28_9STRA)

HSP 1 Score: 124 bits (312), Expect = 4.400e-30
Identity = 65/189 (34.39%), Postives = 104/189 (55.03%), Query Frame = 0
Query:    2 VYPNPQAVCASVAMDFPKGLGKGYRLVADFPPVNGQCELVPGPMIDPEIEGEKYAGTVAFCTMDCLQGYWRCPLAKEAREYFTFVTRDGLYTPTRVPQGIMNATSYFQGMMMEVLGDLVGRACLIYVDNVKVIGRSVEKLIANLRSVLLWFMERELFLAAHKLVLFATEVKWCSKLYSGTVVRHDPEHV 190
            VY N  +     A+   K     +R   D+ P+N   E + G M   E+  E   G + +   D L+G+W+ PL K ++EY +++T  G++TPTRVPQG  +A  +FQ  +  VLGDLV ++ ++++D++ V   + E+L+  + + L    E  L L   K  LF TEV+WC ++ S   V HDPE +
Sbjct:  302 VYENRASRWCCPALPIRKPGTDSFRQTNDYRPLNNVTEPIAGVMPSLEVALEHCKGKMFYAVFDFLKGFWQLPLDKSSQEYMSYMTDKGIFTPTRVPQGSTDAALHFQSTVEMVLGDLVNKSVIVWIDDLLVFADTAEELLEAIEATLTKLDEYGLILNPKKSALFLTEVRWCGRIISKAGVGHDPERI 490          
BLAST of mRNA_H-elongata_contig896.16458.1 vs. uniprot
Match: A0A6A3MU71_9STRA (Reverse transcriptase domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MU71_9STRA)

HSP 1 Score: 124 bits (312), Expect = 7.130e-30
Identity = 70/192 (36.46%), Postives = 106/192 (55.21%), Query Frame = 0
Query:    1 MVYPNPQA--VCASVAMDFPKGLGKGYRLVADFPPVNGQCELVPGPMIDPEIEGEKYAGTVAFCTMDCLQGYWRCPLAKEAREYFTFVTRDGLYTPTRVPQGIMNATSYFQGMMMEVLGDLVGRACLIYVDNVKVIGRSVEKLIANLRSVLLWFMERELFLAAHKLVLFATEVKWCSKLYSGTVVRHDPEHV 190
            +V+ N Q    CA++ +   KG  + YR   D+ P+N +   + G M    +   K  G   F T D  +G+W+  +  + RE+F+F+T D +YTPTRVPQG  ++  +FQ  M EV  D++    LI+VD++ V+ ++ E+ IA LR       E  L L A K  L+A E+ WC ++  G  VRHDPE V
Sbjct:  315 LVFRNNQGRWACAAIPVR-KKGPVEEYRCANDYRPMNKKTIPIAGAMPYLLVVIAKVKGACFFATFDLFKGFWQLLMHPDCREFFSFITNDTVYTPTRVPQGATDSPIHFQNQMQEVFRDMLYENVLIWVDDIVVLAKTAEEFIAVLRKFFSRIHEYGLKLNAKKSCLYAREISWCGRIIDGDGVRHDPERV 505          
BLAST of mRNA_H-elongata_contig896.16458.1 vs. uniprot
Match: A0A2P4YDS0_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YDS0_9STRA)

HSP 1 Score: 125 bits (314), Expect = 7.180e-30
Identity = 59/168 (35.12%), Postives = 98/168 (58.33%), Query Frame = 0
Query:   20 GLGKGYRLVADFPPVNGQCELVPGPMIDPEIEGEKYAGTVAFCTMDCLQGYWRCPLAKEAREYFTFVTRDGLYTPTRVPQGIMNATSYFQGMMMEVLGDLVGRACLIYVDNVKVIGRSVEKLIANLRSVLLWFMERELFLAAHKLVLFATEVKWCSKLYSGTVVRHDP 187
            G    +R+  D+ PVN     + G M + ++  ++ +G+  F   D ++G+W+ PL  +++E  +F+T D ++TP RVPQG M+++ +FQ  + +V  +L+GR CLI++D++ +   S  + I  LR       E  L L  +K V+F  EV WC +L SG  VRHDP
Sbjct:  566 GSADSFRITNDYRPVNKLTVPIAGVMPNLDVVLDQVSGSYGFAKFDLMKGFWQMPLHPDSQELMSFMTEDSVFTPLRVPQGAMDSSVHFQNQLQDVFRELLGRHCLIWIDDIIIYAASATEFIVVLRRFFELVQEHGLKLNVNKSVIFCKEVAWCGRLVSGNAVRHDP 733          
BLAST of mRNA_H-elongata_contig896.16458.1 vs. uniprot
Match: A0A6A3K6I0_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3K6I0_9STRA)

HSP 1 Score: 125 bits (313), Expect = 9.470e-30
Identity = 65/189 (34.39%), Postives = 104/189 (55.03%), Query Frame = 0
Query:    2 VYPNPQAVCASVAMDFPKGLGKGYRLVADFPPVNGQCELVPGPMIDPEIEGEKYAGTVAFCTMDCLQGYWRCPLAKEAREYFTFVTRDGLYTPTRVPQGIMNATSYFQGMMMEVLGDLVGRACLIYVDNVKVIGRSVEKLIANLRSVLLWFMERELFLAAHKLVLFATEVKWCSKLYSGTVVRHDPEHV 190
            VY N  +     A+   K     +R   D+ P+N   E + G M   E+  E   G + +   D L+G+W+ PL K ++EY +++T  G++TPTRVPQG  +A  +FQ  +  VLGDLV ++ ++++D++ V   + E+L+  + + L    E  L L   K  LF TEV+WC ++ S   V HDPE +
Sbjct:  543 VYENRASRWCCPALPIRKPGTDSFRQTNDYRPLNNVTEAIAGVMPSLEVALEHCKGKMFYAVFDFLKGFWQLPLDKSSQEYMSYMTDKGIFTPTRVPQGNTDAALHFQSTVEMVLGDLVNKSVIVWIDDLLVFADTAEELLEAIEATLTKLDEYGLILNPKKSALFLTEVRWCGRIISKAGVGHDPERI 731          
BLAST of mRNA_H-elongata_contig896.16458.1 vs. uniprot
Match: A0A6A4C6S8_9STRA (Uncharacterized protein n=3 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4C6S8_9STRA)

HSP 1 Score: 125 bits (313), Expect = 9.510e-30
Identity = 68/190 (35.79%), Postives = 104/190 (54.74%), Query Frame = 0
Query:    1 MVYPNPQAVCASVAMDFPKGLGKGYRLVADFPPVNGQCELVPGPMIDPEIEGEKYAGTVAFCTMDCLQGYWRCPLAKEAREYFTFVTRDGLYTPTRVPQGIMNATSYFQGMMMEVLGDLVGRACLIYVDNVKVIGRSVEKLIANLRSVLLWFMERELFLAAHKLVLFATEVKWCSKLYSGTVVRHDPEHV 190
            +V  N Q+  A  A+   K      R+  D+ PVN     + G  ++  +  E   G+  F   D  +G+W+ PL   +RE F+FVT DG++TPTRVPQG  ++  +FQ  M +VL DL+ R+  +++D+V +  R+  + + NL +      +R+L L A K  LFA  VKWC K+  G  V HDPE +
Sbjct:  207 LVERNTQSRWACPALPVAKRGTDECRITIDYRPVNRLTVPLAGASLNLAVVTESVRGSYGFGAFDFHKGFWQMPLHPNSREIFSFVTEDGVFTPTRVPQGASDSAVHFQAQMNDVLKDLLFRSVFVWIDDVLLYARTAGEYLENLSAFFAILRQRKLKLNARKCKLFAKRVKWCGKVIDGEGVEHDPERL 396          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig896.16458.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7F6_9PHAE1.740e-4244.79Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5A5_9PHAE1.330e-4045.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6A3J5U5_9STRA3.530e-3439.27Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]
A0A6A3W457_9STRA1.160e-3136.32Reverse transcriptase domain-containing protein n=... [more]
A0A0G4J790_PLABS5.560e-3137.89Reverse transcriptase domain-containing protein n=... [more]
A0A6A3GQ28_9STRA4.400e-3034.39Reverse transcriptase domain-containing protein (F... [more]
A0A6A3MU71_9STRA7.130e-3036.46Reverse transcriptase domain-containing protein n=... [more]
A0A2P4YDS0_9STRA7.180e-3035.12Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A6A3K6I0_9STRA9.470e-3034.39Reverse transcriptase domain-containing protein n=... [more]
A0A6A4C6S8_9STRA9.510e-3035.79Uncharacterized protein n=3 Tax=Phytophthora rubi ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.270coord: 43..174
e-value: 1.6E-27
score: 98.2
NoneNo IPR availableGENE3D3.10.10.10coord: 17..103
e-value: 1.6E-27
score: 98.2
NoneNo IPR availablePANTHERPTHR24559:SF269coord: 50..172
NoneNo IPR availablePANTHERPTHR24559FAMILY NOT NAMEDcoord: 50..172
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 22..189
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 57..173
e-value: 6.3E-10
score: 38.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig896contigH-elongata_contig896:1356..1925 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig896.16458.1mRNA_H-elongata_contig896.16458.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig896 1335..1925 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig896.16458.1 ID=prot_H-elongata_contig896.16458.1|Name=mRNA_H-elongata_contig896.16458.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=190bp
MVYPNPQAVCASVAMDFPKGLGKGYRLVADFPPVNGQCELVPGPMIDPEI
EGEKYAGTVAFCTMDCLQGYWRCPLAKEAREYFTFVTRDGLYTPTRVPQG
IMNATSYFQGMMMEVLGDLVGRACLIYVDNVKVIGRSVEKLIANLRSVLL
WFMERELFLAAHKLVLFATEVKWCSKLYSGTVVRHDPEHV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom