mRNA_H-elongata_contig8958.16457.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig8958.16457.1 vs. uniprot
Match: D7FNP7_ECTSI (Caffeate O-Methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNP7_ECTSI) HSP 1 Score: 385 bits (988), Expect = 2.450e-131 Identity = 179/237 (75.53%), Postives = 206/237 (86.92%), Query Frame = 1
Query: 1 WYERAYDYWEDGENCALDEDGVLGGYGHISPIDINGSAAFLDELQSMRPLLGNDKAAGWIWSIFICFVRLVLGACCCTDCGAGIGRVTKHLLLERFDTVDIVEQSPRLLRAAPKYIGRDRDRTACLCVGLQDFFPAENSYDLVWIQWVVGHFTDVDFVKLISRCRAALRRGGLVVVKDNVVGEGQGAFKVDSDDSSMTRSLGYFRSLFNHGEIKVVHQRQQEGFPGEIFPVYMFALE 711
WYERAYDYWEDG+NC +D+DGVLGGYGHISP DI GSAAFLDEL+ MRPLLG++ AA DCGAGIGRVTKHLLL+RFDTVDIVEQSPRL++AAPKY+GRDRDRT C+CVGLQDFFP E+SYDLVWIQWVVGHFTDVD +KL++RCR+ALR+GGL+VVKDNV+G+G+GAFKVDS+DSSMTRSLGYFRSLFNHG ++VVHQ +Q+GFPGE+FPVYMFALE
Sbjct: 102 WYERAYDYWEDGDNCPVDDDGVLGGYGHISPTDIAGSAAFLDELKRMRPLLGDETAA---------------------DCGAGIGRVTKHLLLDRFDTVDIVEQSPRLIQAAPKYVGRDRDRTTCVCVGLQDFFPPEDSYDLVWIQWVVGHFTDVDLLKLLARCRSALRKGGLIVVKDNVIGQGEGAFKVDSEDSSMTRSLGYFRSLFNHGGVRVVHQTRQDGFPGELFPVYMFALE 317
BLAST of mRNA_H-elongata_contig8958.16457.1 vs. uniprot
Match: A0A067BRJ5_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067BRJ5_SAPPC) HSP 1 Score: 246 bits (628), Expect = 1.830e-77 Identity = 116/237 (48.95%), Postives = 158/237 (66.67%), Query Frame = 1
Query: 1 WYERAYDYWEDGENCALDEDGVLGGYGHISPIDINGSAAFLDELQSMRPLLGNDKAAGWIWSIFICFVRLVLGACCCTDCGAGIGRVTKHLLLERFDTVDIVEQSPRLLRAAPKYIGRDRDRT-ACLCVGLQDFFPAENSYDLVWIQWVVGHFTDVDFVKLISRCRAALRRGGLVVVKDNVVGEGQGAFKVDSDDSSMTRSLGYFRSLFNHGEIKVVHQRQQEGFPGEIFPVYMFAL 708
WY + DYWED ENC D GVLGGYG+ISPIDI GS AFL +Q++RP D+A DCG GIGRV KHLLL F +VD++EQSPRLL+AAP+YIG ++ R LC+G+QDF P+ NSYDL+W QWV H D+DF+K + RC+ ALR GG++ +K+N++ +G +++D DDSS+TRS Y++S+F + ++ +QEGFP E++PV +AL
Sbjct: 54 WYTQGADYWEDEENCPPDVGGVLGGYGYISPIDIEGSTAFLARVQALRPAFKRDRAI---------------------DCGGGIGRVVKHLLLPLFASVDLLEQSPRLLKAAPRYIGAEKHRVETLLCMGMQDFDPSPNSYDLIWCQWVCPHLMDLDFIKFLQRCQQALRPGGVICIKENIIVDGS-PYELDEDDSSVTRSAAYYKSIFRQANLTLLADERQEGFPEELYPVMTYAL 268
BLAST of mRNA_H-elongata_contig8958.16457.1 vs. uniprot
Match: A0A1V9YYT0_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YYT0_9STRA) HSP 1 Score: 244 bits (622), Expect = 1.480e-76 Identity = 115/237 (48.52%), Postives = 156/237 (65.82%), Query Frame = 1
Query: 1 WYERAYDYWEDGENCALDEDGVLGGYGHISPIDINGSAAFLDELQSMRPLLGNDKAAGWIWSIFICFVRLVLGACCCTDCGAGIGRVTKHLLLERFDTVDIVEQSPRLLRAAPKYIGRDRDRTA-CLCVGLQDFFPAENSYDLVWIQWVVGHFTDVDFVKLISRCRAALRRGGLVVVKDNVVGEGQGAFKVDSDDSSMTRSLGYFRSLFNHGEIKVVHQRQQEGFPGEIFPVYMFAL 708
WY + DYWED NC D GVLGGYG+ISP+DI GS +FLD +Q++RP A DCG GIGRV KHLLL F TVD++EQSPRLL+AAP+YIG+D+ R LC+G+QDF PA SYDL+W QWV H DVDF+ + RC+ ALR GG++ +K+N++ +G ++VD +DSS+TRS Y++S+F +K++ + +Q GFP E++PV +AL
Sbjct: 54 WYTQGADYWEDEVNCPPDVGGVLGGYGYISPVDIEGSLSFLDRVQALRPEFTRSHAI---------------------DCGGGIGRVVKHLLLPHFQTVDLLEQSPRLLKAAPRYIGKDKSRVRQLLCMGMQDFDPAPMSYDLIWCQWVCPHLMDVDFITFLQRCQRALRPGGVICIKENIIVDGS-PYEVDEEDSSLTRSTAYYKSIFRQAGLKILTEERQTGFPEELYPVMSYAL 268
BLAST of mRNA_H-elongata_contig8958.16457.1 vs. uniprot
Match: A0A836CCK3_9STRA (AdoMet dependent proline di-methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCK3_9STRA) HSP 1 Score: 235 bits (599), Expect = 2.990e-73 Identity = 127/259 (49.03%), Postives = 163/259 (62.93%), Query Frame = 1
Query: 4 YERAYDYWEDGENCALDEDGVLGGYGHISPIDINGSAAFLDELQSMRPLLGNDKAAGWIWSIFICFVRLVLGACCCTDCGAGIGRVTKHLLLERFDTVDIVEQSPRLLRAAPKYIGRDRDRTACLCVGLQDFFPAENSYDLVWIQWVVGHFTDVDFVKLISRCRAALRRGGLVVVKDNVVG---------------EGQG-------AFKVDSDDSSMTRSLGYFRSLFNHGEIKVVHQRQQEG-FPGEIFPVYMFALE 711
+ +AYDYWE + +GVLGGYG +SPIDI GS FL EL+S+RP LG ++AA DCGAGIGR+T+ LL+ FD VD+VEQSP+LL AAP+++G RD +C+GLQDF P ++YD++W+QWVVGH TDVDFVK + RCR ALR G++V+KDN E G AF +DSDDSS+ RS+ YFRSLF H ++ VV QR++ FP EIFPV+ FALE
Sbjct: 23 FPKAYDYWEASPSTI---EGVLGGYGELSPIDIAGSTKFLAELKSLRPGLGCERAA---------------------DCGAGIGRITRDFLLQHFDAVDMVEQSPKLLEAAPRFLGPLRDCVEYICMGLQDFCPPADTYDVIWVQWVVGHLTDVDFVKFLRRCRQALRPHGVLVLKDNCCSCDGSADAPDGTDNSCEDSGGNAGASSAFVLDSDDSSVARSVAYFRSLFKHADMDVVLQRREASIFPEEIFPVFYFALE 257
BLAST of mRNA_H-elongata_contig8958.16457.1 vs. uniprot
Match: A0A485KWK6_9STRA (Aste57867_12822 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KWK6_9STRA) HSP 1 Score: 231 bits (589), Expect = 2.890e-71 Identity = 115/237 (48.52%), Postives = 149/237 (62.87%), Query Frame = 1
Query: 1 WYERAYDYWEDGENCALDEDGVLGGYGHISPIDINGSAAFLDELQSMRPLLGNDKAAGWIWSIFICFVRLVLGACCCTDCGAGIGRVTKHLLLERFDTVDIVEQSPRLLRAAPKYIGRDRDRTACL-CVGLQDFFPAENSYDLVWIQWVVGHFTDVDFVKLISRCRAALRRGGLVVVKDNVVGEGQGAFKVDSDDSSMTRSLGYFRSLFNHGEIKVVHQRQQEGFPGEIFPVYMFAL 708
WY DYWE ENC + GVLGGYGHISPID+ GSAAFLD LQ RP + + A DCG G+GRV K+LLL R+ VD +EQS RLL AAP YIG ++ R L C+G+QDF P SYDL+W QWV+GH TDVDFV + RC+AAL GG++ +K+N + EG + VD DDSS+ RS Y++S+F + ++ + +Q GFP E++PV +AL
Sbjct: 77 WYTSGADYWEAEENCPPTDMGVLGGYGHISPIDVEGSAAFLDRLQKSRPTMQQNLAI---------------------DCGCGVGRVVKNLLLPRYTAVDCLEQSQRLLAAAPSYIGAEKARVRNLYCMGMQDFEPVARSYDLIWCQWVLGHLTDVDFVAFLKRCQAALAPGGVICIKENAINEGV-PYYVDKDDSSLGRSSAYYKSIFRQAGLTLLAEERQCGFPEELYPVITYAL 291
BLAST of mRNA_H-elongata_contig8958.16457.1 vs. uniprot
Match: A0A6G0WSU0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WSU0_9STRA) HSP 1 Score: 228 bits (581), Expect = 2.340e-70 Identity = 108/237 (45.57%), Postives = 152/237 (64.14%), Query Frame = 1
Query: 1 WYERAYDYWEDGENCALDEDGVLGGYGHISPIDINGSAAFLDELQSMRPLLGNDKAAGWIWSIFICFVRLVLGACCCTDCGAGIGRVTKHLLLERFDTVDIVEQSPRLLRAAPKYIGRDRDRTACL-CVGLQDFFPAENSYDLVWIQWVVGHFTDVDFVKLISRCRAALRRGGLVVVKDNVVGEGQGAFKVDSDDSSMTRSLGYFRSLFNHGEIKVVHQRQQEGFPGEIFPVYMFAL 708
WY +YWE+ ENC ++ GVLGGYGHISP+D+ GS+AFLD +Q++RP + + A DCG G+GRV +LLL R+ VD +EQS RLL+ P Y+G ++ R L C+G+QDF P SYDL+W QWV+GH TDVDFV + RC+AAL GG++ +K+N + EG + VD DDSS+ RS Y++S+F + ++ + +QEGFP E++PV +AL
Sbjct: 55 WYTSGAEYWENEENCPPNDQGVLGGYGHISPVDVEGSSAFLDHIQTLRPAMQRNLAI---------------------DCGCGVGRVVNNLLLPRYTAVDCLEQSQRLLQTIPSYVGPEKARIRNLYCMGMQDFDPKPGSYDLIWCQWVLGHLTDVDFVAFLKRCQAALAPGGVICIKENAINEGV-PYYVDKDDSSLGRSSVYYKSIFRQAGLTLLAETKQEGFPDELYPVITYAL 269
BLAST of mRNA_H-elongata_contig8958.16457.1 vs. uniprot
Match: K3X303_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X303_GLOUD) HSP 1 Score: 228 bits (582), Expect = 4.460e-70 Identity = 113/240 (47.08%), Postives = 153/240 (63.75%), Query Frame = 1
Query: 1 WYERAYDYWEDGENCALDEDGVLGGYGHISPIDINGSAAFLDELQSMRPLLGNDKAAGWIWSIFICFVRLVLGACCCTDCGAGIGRVTKHLLLERFDTVDIVEQSPRLLRAAPKYIGRDRDRTACL----CVGLQDFFPAENSYDLVWIQWVVGHFTDVDFVKLISRCRAALRRGGLVVVKDNVVGEGQGAFKVDSDDSSMTRSLGYFRSLFNHGEIKVVHQRQQEGFPGEIFPVYMFAL 708
WY A+D+WED +NC + ++GVLGG+ H+SP+DI GS FL +Q +RP GW + + DCGAGIGRV+K LLL F VD+VEQSPRLL++ P+Y+GR T + C+GLQDF+P E YDL+WIQWV H TDVDFV + RC+ AL G + VK+NVV G F++D +DSS+TRS Y++SLF + ++ + Q+ FP E++PV MFAL
Sbjct: 84 WYSSAHDFWEDEKNCPVTDNGVLGGFAHVSPVDIKGSERFLARVQKLRP--------GWERQLAV-------------DCGAGIGRVSKFLLLPTFKQVDLVEQSPRLLQSVPQYVGRTSSDTKRIRNLYCMGLQDFYPEEQKYDLIWIQWVSSHLTDVDFVHFLKRCKQALAPNGWIGVKENVVLSGT-PFELDREDSSITRSAAYYKSLFKQAGLTIIVEELQQHFPRELYPVKMFAL 301
BLAST of mRNA_H-elongata_contig8958.16457.1 vs. uniprot
Match: A0A024TWI1_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TWI1_9STRA) HSP 1 Score: 226 bits (576), Expect = 2.190e-69 Identity = 110/239 (46.03%), Postives = 148/239 (61.92%), Query Frame = 1
Query: 1 WYERAYDYWEDGENCALDEDGVLGGYGHISPIDINGSAAFLDELQSMRPLLGNDKAAGWIWSIFICFVRLVLGACCCTDCGAGIGRVTKHLLLERFDTVDIVEQSPRLLRAAPKYIGRDRDRTAC---LCVGLQDFFPAENSYDLVWIQWVVGHFTDVDFVKLISRCRAALRRGGLVVVKDNVVGEGQGAFKVDSDDSSMTRSLGYFRSLFNHGEIKVVHQRQQEGFPGEIFPVYMFAL 708
WY YWED NC ++ GVLGGYGHISP+D+ GS+ FLD +Q +RP +G A G +S F+ + DCG G+GRV K+LLL RFD VD +EQ RLL P YIG D C+G+QDF P +YDL+W QWV+GH TD DFV+ + RC+AAL G++ +K+N + EG + VD DDSS+ RS Y++SLF + +V + +Q FP E++PV +AL
Sbjct: 54 WYTSGAKYWEDENNCPPNDQGVLGGYGHISPVDVEGSSRFLDRVQELRPGMGRQLAIGVSFSESHGFIAFKV------DCGCGVGRVVKNLLLPRFDAVDCLEQCQRLLNTVPSYIGNASDTARIRNLYCMGMQDFQPEAGTYDLIWCQWVLGHLTDSDFVEFMKRCQAALAPNGVICIKENAINEGA-PYYVDKDDSSLGRSPVYYKSLFRQAGLTLVAEAEQSDFPDELYPVVSYAL 285
BLAST of mRNA_H-elongata_contig8958.16457.1 vs. uniprot
Match: A0A8K1CPE5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPE5_PYTOL) HSP 1 Score: 222 bits (565), Expect = 1.610e-67 Identity = 116/242 (47.93%), Postives = 148/242 (61.16%), Query Frame = 1
Query: 1 WYERAYDYWEDGENCALDEDGVLGGYGHISPIDINGSAAFLDELQSMRPLLGNDKAAGWIWSIFICFVRLVLGACCCTDCGAGIGRVTKHLLLERFDTVDIVEQSPRLLRAAPKYIGRDRDRTAC------LCVGLQDFFPAENSYDLVWIQWVVGHFTDVDFVKLISRCRAALRRGGLVVVKDNVVGEGQGAFKVDSDDSSMTRSLGYFRSLFNHGEIKVVHQRQQEGFPGEIFPVYMFAL 708
WY A DYW+D E C+LD++GVLGG+ HISP D++ S F+ +L RP D DCGAGIGRVTK+LLL F VD++EQS RLLR P+YIGRD D A C+GLQDF PA SYDLVWIQWV H TDVDFV + RC+A L G + VK+NV+ G +++D DSSMTRS YF+S+F ++V+ + Q+ FP E++PV M+AL
Sbjct: 83 WYSSANDYWQDEEKCSLDDNGVLGGFAHISPADVHDSKEFIYKLALKRPQWKRDVVV---------------------DCGAGIGRVTKNLLLPLFQRVDLIEQSERLLRGVPQYIGRD-DAAALSRVRNLYCMGLQDFTPASRSYDLVWIQWVSSHLTDVDFVDFLKRCKAGLAPHGWIAVKENVLLAGS-PYEIDRQDSSMTRSDVYFKSIFRQAGLEVIAEETQKNFPEELYPVKMYAL 301
BLAST of mRNA_H-elongata_contig8958.16457.1 vs. uniprot
Match: W4G1H4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G1H4_9STRA) HSP 1 Score: 220 bits (561), Expect = 2.660e-67 Identity = 106/239 (44.35%), Postives = 145/239 (60.67%), Query Frame = 1
Query: 1 WYERAYDYWEDGENCALDEDGVLGGYGHISPIDINGSAAFLDELQSMRPLLGNDKAAGWIWSIFICFVRLVLGACCCTDCGAGIGRVTKHLLLERFDTVDIVEQSPRLLRAAPKYIGRDRDRTAC---LCVGLQDFFPAENSYDLVWIQWVVGHFTDVDFVKLISRCRAALRRGGLVVVKDNVVGEGQGAFKVDSDDSSMTRSLGYFRSLFNHGEIKVVHQRQQEGFPGEIFPVYMFAL 708
WY YWED NC +DGVLGGYG ISP D+ GSA+FLD +Q++RP + + A DCG G+GRV KHLLL R+D+VD +EQS RLL P YIGR D + C+G+QDF P ++YDL+W QWV+GH TD DFV + RC+ AL G++ +K+N + EG + VD DDSS+ RS Y++S+F + ++ + +Q FP E++PV +AL
Sbjct: 56 WYTSGAKYWEDESNCPPTDDGVLGGYGRISPADVEGSASFLDRIQTLRPTMKRNLAI---------------------DCGCGVGRVVKHLLLPRYDSVDCLEQSQRLLNTVPSYIGRSSDTSRIRNLYCMGMQDFQPEPHAYDLIWCQWVLGHLTDSDFVAFLKRCQKALAPDGVICIKENAINEGV-PYYVDKDDSSLGRSSVYYKSIFRQAGLTLLAETEQSDFPDELYPVITYAL 272 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8958.16457.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig8958.16457.1 >prot_H-elongata_contig8958.16457.1 ID=prot_H-elongata_contig8958.16457.1|Name=mRNA_H-elongata_contig8958.16457.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=192bp MRPLLGNDKAAGWIWSIFICFVRLVLGACCCTDCGAGIGRVTKHLLLERFback to top mRNA from alignment at H-elongata_contig8958:2737..4043- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig8958.16457.1 ID=mRNA_H-elongata_contig8958.16457.1|Name=mRNA_H-elongata_contig8958.16457.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1307bp|location=Sequence derived from alignment at H-elongata_contig8958:2737..4043- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig8958:2737..4043- >mRNA_H-elongata_contig8958.16457.1 ID=mRNA_H-elongata_contig8958.16457.1|Name=mRNA_H-elongata_contig8958.16457.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1152bp|location=Sequence derived from alignment at H-elongata_contig8958:2737..4043- (Himanthalia elongata Himel1 dioecious)back to top |