prot_H-elongata_contig8956.16455.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8956.16455.1
Unique Nameprot_H-elongata_contig8956.16455.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length1084
Homology
BLAST of mRNA_H-elongata_contig8956.16455.1 vs. uniprot
Match: D7G491_ECTSI (Similar to Dynein heavy chain 3, axonemal (Axonemal beta dynein heavy chain 3) (Ciliary dynein heavy chain 3), partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G491_ECTSI)

HSP 1 Score: 504 bits (1299), Expect = 6.580e-151
Identity = 446/1248 (35.74%), Postives = 586/1248 (46.96%), Query Frame = 0
Query:    1 IIEECGKSLIQPSAVSTPMDFLTSESEYRRVWQVFKVWLFSAVAAKLQARLPKFFTMSYRVFNMGICIPTLELDARFLERYDIIQEQSISSKTPASPTAPQQVKFSRDALAKGTCLPPDRAEYALEAMLCAMGRHAGIGSTLLVDFGVGVLAARRQVMKFTFVQGVDSLKVTPEPPASHTVMKKAVVARGGIHTFGKCYIPYVCRENKEIAIARSRETSSLIRSINNLGVDSDSPPEGVEGEESM-VDQDAVRTMRTWNP------SIGSTPTPVAPLRAAKPPRPDRSTNDRD----KSATNDTRSTC---------------RLWARLSGLRDRG-VKAWITATVNASLPTSSSSAIPPLPSLIDIHTRLRGSILA--PSELGLGMKAL-CPALNSPLG---------------------------------FEPTGVERVGNHFSPAAQELWLDPSRGGIAWRNGERSLGNWGNHMGGDNSSEIPEGVIVDAKAFSRQTEASREERRVASDFPDTS--KVFVGL------------PEDSNDTAMMGDAQSQKKHELREVESMH-EPYVEERKTLLGG----------------TKKRP-------RGDRRES-------------------IAFETMPKLGGVPPIG--LPQSSP--------EFPREACTVDDRRTSAVARPP--SSP-----RLVPGVGGK---RPNFMSKRWLRSKYPCAS---GELQALRSLYFPQQESFLEVT----LASDGRVDEHRGCDIEAQGGNGTASKHDDLVEEGFRRYHHYLNVDAALADSVAVLQVTRQAGIVVKVLDRLLDRVSDSAACAETFD-DDDGSLEDCSKXXXXXXXXXXRETGRRRAPANNGKYSPGTRYKSRRKSSSAGGDKLASENDHNAIIEGGESGEEKGEEDKDENEGSDKFETC---------TSLTSFGILAERCLSQGLKNETDTNAGEGEENGAVRGNGL----TDRAPAALIVKVMRDTSPTDHTEEKHRLTLGG----ERFQMPEALEEGMKRSLDEASEAFRRSIRRAVLNYVLLDARQRKRLGIPAIPPGFSSEGWGWGKGRGFQESPPEWRRRVSRARQALIRGQITGSPALVAAQALLVECREIRLLKLPISTEAIWSSRWSPMIAENFRSAQLKDISKSVERVRRLLYPGLADALMSRLGDHSG--------LAPRH-----DSYVRRYLLAVNVMAASVLRSIVEVALADLLAFFQ 1070
            I+ +CG+SLI+PSAVS PMDFLTSE+EYRRVWQVFK WL SAV+AKL+A +P+FF++SYRVFN+GICIPTLE D  FL RY I QEQS+SSK+  SP AP+QV+FSR+AL KG  LP  RA YALE +LCA+G+ AG+G+TLLVD GVGVLAAR +V KFTFVQ                                             +A+AR+RET+SL+RS+  +  D   PP+GVEGEE M  D   V  MR WNP      S  S  T V+   A      D     ++    K+AT   + T                R+   L G RDRG     I    +A+              L+D+H RLRGS+L+  PS +   + A   P+ +SP G                                  EPTGVER+G+++SPAAQ L+LD +RG +AWR    + G +  + GG N+  +  G+     A +    A R+  R  +   D++  +V+VG+            P   N T + G   S+K      + + H E     R    GG                   RP       R D +E                    +    +P  G    +G  +P+SSP          P  A  V       V  PP  SSP     +  P V  K   RP+  + +    + PC     G ++  R+  +  Q S          AS G V +    ++E     G         + GF RYHHYL  D+ LA+SV VLQ   QAGIV KV+  L  R             +  G      +           +T    + ++NG    G R     + S  G   +      N   +  + G   G          D FE           T+      LA             TN+G G   G V G  +     D  P A       +T+          +   G       ++P+  + G++  L+E  EAFR SIRRAVLNYV+LDA QR RLGI A+PPGF+S+GWGWGKGRG Q+SPPEW+RR  RAR+AL  GQITGSPALVAAQALL +CR  RLL+LP S   I +S WS M AE FRS+QL  +S+   RVRRLLYPGL++AL ++LG  S         LA R      D +VRRYL AVNVM AS+LR +VE A++DL  F +
Sbjct:    2 IMHKCGRSLIEPSAVSAPMDFLTSEAEYRRVWQVFKHWLCSAVSAKLRACVPRFFSLSYRVFNLGICIPTLEFDESFLNRYGISQEQSLSSKSSLSPRAPKQVEFSREALGKGAGLPSARASYALEGLLCAVGKEAGLGATLLVDCGVGVLAARGRVTKFTFVQ---------------------------------------------LALARARETTSLLRSLREVQADRFLPPDGVEGEEGMPTDNGVVAAMRAWNPGRSSASSASSAGTGVSGSLAFSGDGNDGDIRTKNGLLGKNATGAAKITAGEIAGSTVRARIGLGRMTLPLRGFRDRGRTPVGIATGESAAXXXXXXXXXXXXXXLMDVHARLRGSVLSASPSPMARLLDATTAPSPSSPNGDRGIANSVLPERKQSRAAAVEPGTRPTGHLSLWLEPTGVERLGSYYSPAAQLLYLDVNRGCLAWRE-NANTGGFTCNEGGSNTRGVGGGLGSRILAPATPKLARRDAARGQTSPTDSANPQVYVGMVANVTRVASQGGPNGVNATVVTGTGSSEKDGHKLGLRTPHMESECHNRPAYAGGGXXXXXPGVPSSSEARQMSRPHDSSHSSRNDGQEGRSETWMSSSPPDATPAKAGVQSPELPSDGNNNTVGPLVPESSPGRERTSDRNCPPRAGQVGALAGCEVTYPPRSSSPPVKRNQTPPAVLSKIRRRPDDETGQRDDDRLPCPGEGRGSMEGERAELWMGQRSGGNGDRGGWAASAGAV-QAANPELEVSDAAGRR-------QAGFARYHHYLQCDSTLAESVTVLQPPWQAGIVRKVVHGLSGRGGGXXXXXXXXXCNTSGRHSGTPRGWDLEKSNDEEDTS---SESDNGGV--GVRGIGGGRYSRPGCKDVGGTGTENIPAKDAQEG---GXXXXXXXXXXDVFEVHVEGPAPVAKTAQHKVPYLAVTSGGDQPPQSPTTNSGGGR--GVVGGGSVFTSRVDGTPRATAFNRAANTAKRPRARTPRGVAGPGPGEARMPEVPDGWKAGVEACLEETCEAFRASIRRAVLNYVVLDAGQRDRLGISAVPPGFASQGWGWGKGRGIQKSPPEWQRRFVRAREALNMGQITGSPALVAAQALLAKCRGTRLLRLPKSAAEIQASSWSAMTAEEFRSSQLSHLSRKARRVRRLLYPGLSEALKAQLGVGSKGTRATTAELATRTKSSPPDGHVRRYLAAVNVMTASILRGMVETAISDLQIFLE 1185          
BLAST of mRNA_H-elongata_contig8956.16455.1 vs. uniprot
Match: A0A6H5L524_9PHAE (DHC_N2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L524_9PHAE)

HSP 1 Score: 472 bits (1215), Expect = 7.750e-139
Identity = 449/1277 (35.16%), Postives = 575/1277 (45.03%), Query Frame = 0
Query:    1 IIEECGKSLIQPSAVSTPMDFLTSESEYRRVWQVFKVWLFSAVAAKLQARLPKFFTMSYRVFNMGICIPTLELDARFLER------YDIIQEQSIS-----------SKTPASPTAPQQ---VKFSRDALAKGTCLPPDRAEYALEAMLCAMGRHAGIGSTLLVDFGVGVLAARRQVMKFTFVQGVDSLKVTPEPPASHTVMKKAVVARGGIHTFGKCYIPYVCRENKEIAIARSRETSSLIRSINNLGVDSDSPPEGVEGEESM-VDQDAVRTMRTWNPSIGSTPTPVAPLRAAKPPRPDRSTND-RDKS------ATNDTRSTC---------------RLWARLSGLRDRGVKAWITATVNASLPTSSSSAIPPLPSLIDIHTRLRGSILA--PSELGLGMKAL-CPALNSPLG---------------------------------FEPTGVERVGNHFSPAAQELWLDPSRGGIAWRNGERSLGNWGNHMGGDNSSEIPEGVIVDAKAFSRQTEASREERRVASDFPDTSKV--FVGL------------PEDSNDTAMMGDAQSQKK-HELREVESMHEPYVEERKTLLGG----------------TKKRP-------RGD----RRESIAFETMPKL----GGVPPIGLPQ---------------------SSPEFPREACTVDDRRTSAVARPPSSPRLVPGVGGKRPNFMSKRWLR----------SKYPCAS---GELQALRSLYFPQQESF--------------------LEVTLASDGRVDEHRGCDIEAQGGNGTASKHDDLVEEGFRRYHHYLNVDAALADSVAVLQVTRQAGIVVKVLDRLLDRVSDSAACAETFDDDDGSLEDCSKXXXXXXXXXXRETGRRRAPANNGKYS-PGTRYKSRRKSSSAGGDKLASENDHNAIIEGGESGEEKGEEDKDENEGSDKFETCT------SLTSFGILAERCLSQGLKNE-----TDTNAGEGEENGAVRGNGLTDRAPAALIVKVMRDTSPTDHTEEKHRLTLGGERFQMPE---ALEEGMKRSLDEASEAFRRSIRRAVLNYVLLDARQRKRLGIPAIPPGFSSEGWGWGKGRGFQESPPEWRRRVSRARQALIRGQITGSPALVAAQALLVECREIRLLKLPISTEAIWSSRWSPMIAENFRSAQLKDISKSVERVRRLLYPGLADALMSRLGDHSG--------LAPRH-----DSYVRRYLLAVNVMAASVLRSIVEVALADLLAFFQ 1070
            II +CG+SLI+PSAVS PMDFLTSE+EYRRVWQVFK WL SAV+AKL+A +P+FF++SYRVFN+GICIPT+E D  FL R      + I +EQ              S   AS T+ ++   V+FSR+AL KG  LPP RA YALE +LCA+G+ AG+G TLLVD GVGVLAAR +V KFTFVQ                                             +A AR+RET+SL+RS+  +  D   PP+GVEGEE M  D   V  MR WNP   S  +    +  +     D +  D R KS      AT   + T                R+   L G RDRG      AT +++              L+D+H RLRGS+L+  PS +   + A   P+ +SP G                                  EPTGVER+G+++SPAAQ L+LD SRG +AWR    + G   N  G DN   +  G+       +    A R+  R  S + D++    + G+            P   N   +     S+K  HEL       E     R    GG                   RP       R D    R E++   + P       GV P  LP                      S    P  A          VA PP SP          P  +SK  LR           + PC     G ++  R   +  Q S                     LEV+ A+  R      C        G       LV     RYHHY+  D  LA+SV VLQ   QAGIV KV+  L  R            +  G     S+           +T      A  G +   G RY      S  GG  +      N   +  + G E         EG D FE         + T+   +    ++ G  +      T+++ G G   GA   +   +RA  A   K +R  +P      +  +  G    +MPE     + G++  L+E  E+FR SIRRAVLNYVLLDA QR RLGIPA+PPGF+SEGWGWGKGRG  +SPPEWRRR  RAR+AL  GQITGSPALVAAQALL  CR  RLL+LP S   I +S WS M AE FRS+QL  +S+   RVRRLLYPGL++AL ++LG  S         LA R      D +VRRYL AVNVM AS+LR +VE A++DL AFF+
Sbjct:    2 IIYKCGRSLIEPSAVSAPMDFLTSEAEYRRVWQVFKNWLCSAVSAKLRACVPRFFSLSYRVFNLGICIPTMEFDESFLNRWAFDAHFSINREQESDELGGCLAFPTRSMVTASLTSEREETRVEFSREALGKGAGLPPARASYALEGLLCAVGKEAGLGKTLLVDCGVGVLAARGRVTKFTFVQ---------------------------------------------LAQARARETTSLLRSLREVQADRCLPPDGVEGEEGMPTDNGVVAAMRAWNPGASSASSAGTGVSGSLALLGDGNDGDVRSKSGLLGKDATGAAKITAGEITGSTVRARIGLGRITLPLRGFRDRGRTPVGMATGDSAAXXXXXXXXXXXXXLMDVHARLRGSVLSASPSPMARLLAATTAPSPSSPYGDRGIANSILPERKRSRAAAVEPGTRPTGHRALWLEPTGVERLGSYYSPAAQLLYLDVSRGCLAWRESANTGGFTCNDGGSDNGG-VGGGLGSRILLPATPKLARRDAARGKSSYTDSANAQGYDGIVSSITRAASQAGPNGVNAKVVTRTGSSEKDGHELGLRTPHKESECHNRPAYAGGGDGGCGPGVPSSSKACDMSRPHDSSHDSRNDGHEGRSETLMSSSPPDAIAAGAGVQPPELPSEGNNNTVGPLVTESLPGREKASDRSCPPRAGQEGALAGCEVAHPPRSPSPPVKRRQSPPAVLSKIRLRLDNGTDQRDDDRLPCPGEGCGSMEGERVELWMGQRSDGNGDGGGWAVAGAVHAANPGLEVSDATGRRQAGFARC-------RGVIGSSVCLV---CVRYHHYIQCDPTLAESVTVLQPPWQAGIVRKVIHGLSGR--GXXXXXXXXXNTSGCHTGTSRGRDVEKSNDEEDTSSESDNAGAGVWGIGGGRY------SRPGGKGVEGTGTENVPTKDAQDGGEXXXXXXXXXEG-DLFEVHVEGPSPLAKTAQHKVPPLAVTSGRDHPPQSPTTNSSGGRGVGGGASVFSSRVNRA--ADTAKRLRARTP------RGVVGPGPGEVRMPELPGGWKAGVEARLEETCESFRSSIRRAVLNYVLLDAGQRDRLGIPAVPPGFASEGWGWGKGRGIHKSPPEWRRRYVRAREALNMGQITGSPALVAAQALLATCRGTRLLRLPKSAAEIQASSWSAMTAEEFRSSQLSHLSRKARRVRRLLYPGLSEALKAQLGVGSNGTRATSAELATRAKPSPPDGHVRRYLAAVNVMTASILRGMVETAISDLQAFFR 1205          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8956.16455.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G491_ECTSI6.580e-15135.74Similar to Dynein heavy chain 3, axonemal (Axonema... [more]
A0A6H5L524_9PHAE7.750e-13935.16DHC_N2 domain-containing protein n=1 Tax=Ectocarpu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8956contigH-elongata_contig8956:2609..8661 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8956.16455.1mRNA_H-elongata_contig8956.16455.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8956 2609..8661 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8956.16455.1 ID=prot_H-elongata_contig8956.16455.1|Name=mRNA_H-elongata_contig8956.16455.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1084bp
IIEECGKSLIQPSAVSTPMDFLTSESEYRRVWQVFKVWLFSAVAAKLQAR
LPKFFTMSYRVFNMGICIPTLELDARFLERYDIIQEQSISSKTPASPTAP
QQVKFSRDALAKGTCLPPDRAEYALEAMLCAMGRHAGIGSTLLVDFGVGV
LAARRQVMKFTFVQGVDSLKVTPEPPASHTVMKKAVVARGGIHTFGKCYI
PYVCRENKEIAIARSRETSSLIRSINNLGVDSDSPPEGVEGEESMVDQDA
VRTMRTWNPSIGSTPTPVAPLRAAKPPRPDRSTNDRDKSATNDTRSTCRL
WARLSGLRDRGVKAWITATVNASLPTSSSSAIPPLPSLIDIHTRLRGSIL
APSELGLGMKALCPALNSPLGFEPTGVERVGNHFSPAAQELWLDPSRGGI
AWRNGERSLGNWGNHMGGDNSSEIPEGVIVDAKAFSRQTEASREERRVAS
DFPDTSKVFVGLPEDSNDTAMMGDAQSQKKHELREVESMHEPYVEERKTL
LGGTKKRPRGDRRESIAFETMPKLGGVPPIGLPQSSPEFPREACTVDDRR
TSAVARPPSSPRLVPGVGGKRPNFMSKRWLRSKYPCASGELQALRSLYFP
QQESFLEVTLASDGRVDEHRGCDIEAQGGNGTASKHDDLVEEGFRRYHHY
LNVDAALADSVAVLQVTRQAGIVVKVLDRLLDRVSDSAACAETFDDDDGS
LEDCSKDRSEERSEAQRETGRRRAPANNGKYSPGTRYKSRRKSSSAGGDK
LASENDHNAIIEGGESGEEKGEEDKDENEGSDKFETCTSLTSFGILAERC
LSQGLKNETDTNAGEGEENGAVRGNGLTDRAPAALIVKVMRDTSPTDHTE
EKHRLTLGGERFQMPEALEEGMKRSLDEASEAFRRSIRRAVLNYVLLDAR
QRKRLGIPAIPPGFSSEGWGWGKGRGFQESPPEWRRRVSRARQALIRGQI
TGSPALVAAQALLVECREIRLLKLPISTEAIWSSRWSPMIAENFRSAQLK
DISKSVERVRRLLYPGLADALMSRLGDHSGLAPRHDSYVRRYLLAVNVMA
ASVLRSIVEVALADLLAFFQAFTPFTSARNEDDE
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