prot_H-elongata_contig121462.1645.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig121462.1645.1
Unique Nameprot_H-elongata_contig121462.1645.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length43
Homology
BLAST of mRNA_H-elongata_contig121462.1645.1 vs. uniprot
Match: M4BPP6_HYAAE (Letm1 RBD domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BPP6_HYAAE)

HSP 1 Score: 51.6 bits (122), Expect = 2.050e-6
Identity = 19/43 (44.19%), Postives = 29/43 (67.44%), Query Frame = 0
Query:    1 MKALPLVMVFAVPFAGYIGPAIGFFYPKNRLPAQFWTPCRRLE 43
            +K+LPL++ F VP  GY  P +G+ +PK  LP QFW P ++ +
Sbjct:   64 LKSLPLLVFFGVPLVGYAAPLLGYQFPKQLLPWQFWRPDQKSQ 106          
BLAST of mRNA_H-elongata_contig121462.1645.1 vs. uniprot
Match: A0A225VLH1_9STRA (Letm1 RBD domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VLH1_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 2.850e-6
Identity = 19/43 (44.19%), Postives = 28/43 (65.12%), Query Frame = 0
Query:    1 MKALPLVMVFAVPFAGYIGPAIGFFYPKNRLPAQFWTPCRRLE 43
            +K+LPL+  F VP  GY  P +G+ +PK  LP QFW P ++ +
Sbjct:   80 LKSLPLLAFFCVPLVGYAAPLLGYQFPKQLLPWQFWRPDQKTQ 122          
BLAST of mRNA_H-elongata_contig121462.1645.1 vs. uniprot
Match: A0A662XRW7_9STRA (Letm1 RBD domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XRW7_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 2.900e-6
Identity = 19/43 (44.19%), Postives = 28/43 (65.12%), Query Frame = 0
Query:    1 MKALPLVMVFAVPFAGYIGPAIGFFYPKNRLPAQFWTPCRRLE 43
            +K+LPL+  F VP  GY  P +G+ +PK  LP QFW P ++ +
Sbjct:  110 LKSLPLLAFFCVPMVGYAAPLLGYQFPKQLLPWQFWRPDQKTQ 152          
BLAST of mRNA_H-elongata_contig121462.1645.1 vs. uniprot
Match: A0A6A4D6B5_9STRA (Letm1 RBD domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4D6B5_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 2.900e-6
Identity = 18/43 (41.86%), Postives = 29/43 (67.44%), Query Frame = 0
Query:    1 MKALPLVMVFAVPFAGYIGPAIGFFYPKNRLPAQFWTPCRRLE 43
            +K+LP++ +F VP  GY  P +G+ +PK  LP QFW P ++ +
Sbjct:  102 LKSLPILAIFCVPVLGYAAPLLGYQFPKQLLPWQFWRPDQKTQ 144          
BLAST of mRNA_H-elongata_contig121462.1645.1 vs. uniprot
Match: A0A0P1AW47_PLAHL (Putative receptor CCR1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AW47_PLAHL)

HSP 1 Score: 50.8 bits (120), Expect = 3.940e-6
Identity = 19/43 (44.19%), Postives = 28/43 (65.12%), Query Frame = 0
Query:    1 MKALPLVMVFAVPFAGYIGPAIGFFYPKNRLPAQFWTPCRRLE 43
            +K+LP++  F VP  GY  P +G+ +PK  LP QFW P +R +
Sbjct:   91 LKSLPILAFFCVPVLGYAAPLLGYQFPKQLLPWQFWRPDQRTQ 133          
BLAST of mRNA_H-elongata_contig121462.1645.1 vs. uniprot
Match: A0A833TDI3_PHYIN (LETM1-like protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TDI3_PHYIN)

HSP 1 Score: 50.8 bits (120), Expect = 3.950e-6
Identity = 19/43 (44.19%), Postives = 28/43 (65.12%), Query Frame = 0
Query:    1 MKALPLVMVFAVPFAGYIGPAIGFFYPKNRLPAQFWTPCRRLE 43
            +K+LPL+  F VP  GY  P +G+ +PK  LP QFW P ++ +
Sbjct:   97 LKSLPLLAFFCVPLLGYAAPLLGYQFPKQLLPWQFWRPDQKTQ 139          
BLAST of mRNA_H-elongata_contig121462.1645.1 vs. uniprot
Match: A0A2P4YM82_9STRA (Letm1 RBD domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YM82_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 5.260e-6
Identity = 19/43 (44.19%), Postives = 28/43 (65.12%), Query Frame = 0
Query:    1 MKALPLVMVFAVPFAGYIGPAIGFFYPKNRLPAQFWTPCRRLE 43
            +K+LPL+  F VP  GY  P +G+ +PK  LP QFW P ++ +
Sbjct:   63 LKSLPLLAFFCVPILGYAAPLLGYQFPKQLLPWQFWRPEQKTQ 105          
BLAST of mRNA_H-elongata_contig121462.1645.1 vs. uniprot
Match: A0A024GDF9_9STRA (Letm1 RBD domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GDF9_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 5.360e-6
Identity = 19/36 (52.78%), Postives = 27/36 (75.00%), Query Frame = 0
Query:    2 KALPLVMVFAVPFAGYIGPAIGFFYPKNRLPAQFWT 37
            K+LPL+++FAVP  GY  P +G+ +PK  LP QFW+
Sbjct:   81 KSLPLMVLFAVPLVGYAAPILGYKFPKQLLPWQFWS 116          
BLAST of mRNA_H-elongata_contig121462.1645.1 vs. uniprot
Match: F0WW41_9STRA (PREDICTED: similar to predicted protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WW41_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 5.440e-6
Identity = 19/42 (45.24%), Postives = 29/42 (69.05%), Query Frame = 0
Query:    2 KALPLVMVFAVPFAGYIGPAIGFFYPKNRLPAQFWTPCRRLE 43
            K+LPL+++F VP  GY  P +GF +PK  LP QFW+  ++ +
Sbjct:  113 KSLPLLVLFTVPLIGYAAPILGFKFPKQLLPWQFWSDGQKTQ 154          
BLAST of mRNA_H-elongata_contig121462.1645.1 vs. uniprot
Match: A0A3M6VR87_9STRA (Letm1 RBD domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VR87_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 7.220e-6
Identity = 19/42 (45.24%), Postives = 27/42 (64.29%), Query Frame = 0
Query:    2 KALPLVMVFAVPFAGYIGPAIGFFYPKNRLPAQFWTPCRRLE 43
            K+LPL+  F VP  GY  P +G+ +PK  LP QFW P ++ +
Sbjct:   65 KSLPLLAFFCVPLIGYAAPLLGYKFPKQLLPWQFWRPNQKTQ 106          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig121462.1645.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
M4BPP6_HYAAE2.050e-644.19Letm1 RBD domain-containing protein n=1 Tax=Hyalop... [more]
A0A225VLH1_9STRA2.850e-644.19Letm1 RBD domain-containing protein n=1 Tax=Phytop... [more]
A0A662XRW7_9STRA2.900e-644.19Letm1 RBD domain-containing protein n=2 Tax=Nothop... [more]
A0A6A4D6B5_9STRA2.900e-641.86Letm1 RBD domain-containing protein n=4 Tax=Phytop... [more]
A0A0P1AW47_PLAHL3.940e-644.19Putative receptor CCR1 n=1 Tax=Plasmopara halstedi... [more]
A0A833TDI3_PHYIN3.950e-644.19LETM1-like protein n=1 Tax=Phytophthora infestans ... [more]
A0A2P4YM82_9STRA5.260e-644.19Letm1 RBD domain-containing protein n=1 Tax=Phytop... [more]
A0A024GDF9_9STRA5.360e-652.78Letm1 RBD domain-containing protein n=1 Tax=Albugo... [more]
F0WW41_9STRA5.440e-645.24PREDICTED: similar to predicted protein putative n... [more]
A0A3M6VR87_9STRA7.220e-645.24Letm1 RBD domain-containing protein n=1 Tax=Perono... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011685LETM1-likePFAMPF07766LETM1coord: 1..41
e-value: 8.4E-7
score: 28.6
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 27..43
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..26
NoneNo IPR availableTMHMMTMhelixcoord: 4..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig121462contigH-elongata_contig121462:1856..1984 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig121462.1645.1mRNA_H-elongata_contig121462.1645.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig121462 1838..1984 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig121462.1645.1 ID=prot_H-elongata_contig121462.1645.1|Name=mRNA_H-elongata_contig121462.1645.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=43bp
MKALPLVMVFAVPFAGYIGPAIGFFYPKNRLPAQFWTPCRRLE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011685LETM1