prot_H-elongata_contig89327.16433.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig89327.16433.1
Unique Nameprot_H-elongata_contig89327.16433.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length323
Homology
BLAST of mRNA_H-elongata_contig89327.16433.1 vs. uniprot
Match: D7FT56_ECTSI (tRNA-uridine aminocarboxypropyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT56_ECTSI)

HSP 1 Score: 215 bits (547), Expect = 7.980e-63
Identity = 153/350 (43.71%), Postives = 193/350 (55.14%), Query Frame = 0
Query:    1 ASKVCLCSVLPEDAIATSTQFLILQHPSEAKRQITGTVPLILLCLSNCRRVVMPHTGNAQFDDDSLRGLLGID-------------NREGDDISAPARPLLLFPCPDAEFLEDVASERHEQAAEALTMPPPAVVGGEIDGNSILRPTTLTPSGRRTERLGEDHGGGHQGASVCPPLVVLIDGTWSQARQILSRYPSL---------SSRKLSAVGPGARGVRTSVIFSAASRRSVDAXXXXXXXXXXXXXXXXT--TEDG-LCRAVMFRSAGSSGYGFRREPSRECISTLESVAYTLEVLEPTQEGLSAAGYLRRAFSTMVSTQLEARGDA--KIPRFEGRKARAGYRRS 323
            A ++CLCS LP +A+ TST+F+ILQHP+E K+++TGTVPL+L CL+NC RVVM +     + +  LR  LG++             + E ++ ++   PLLLFPCP AE+LED+A+ R + A  A   P                                                 L+DGTWSQA+QILSRYPSL         + +K   +G    GV  +             XXXXXXXXXXX         EDG LCRAV FR AG SGYGFRREP++EC+STLESVAYTLEVLE T +GL+AA YLR+AF  MVS QL +R DA  + PRF  RK R   RRS
Sbjct:  122 AREMCLCSSLPAEAMPTSTRFVILQHPAETKKRVTGTVPLVLHCLANCTRVVMRY----DYSEQDLRKALGVEVAIYRSPERVSEISSERENSASTGIPLLLFPCPGAEYLEDIAASRDQPAPSAQPFPXXXXXXXXXXXXXXXXXXXXXXX-------------------XXXXXXXLVDGTWSQAKQILSRYPSLLRPTTATTPAGQKTRELGASVGGVPVAAXXXXXXXXXXXXXXXXXXXXXXXSGGREAGPMEDGALCRAVKFRCAGVSGYGFRREPAKECLSTLESVAYTLEVLEGTPQGLAAAAYLRKAFKAMVSMQL-SRADAGGRRPRFVNRKERTTNRRS 447          
BLAST of mRNA_H-elongata_contig89327.16433.1 vs. uniprot
Match: A0A836CLP8_9STRA (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLP8_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.230e-13
Identity = 50/148 (33.78%), Postives = 66/148 (44.59%), Query Frame = 0
Query:  164 VVLIDGTWSQARQILSRYPSLSSRKLSAVGPGARGVRTSVIFSAASRRSVDAXXXXXXXXXXXXXXXXTTEDGLCRAVMFRSAGSSGYGFRREPSRECISTLESVAYTLEVLEPTQEGLSAAGYLRRAFSTMVSTQLEARGDAKIPRF 311
            ++LIDGTW+QA++I+   P LS                                                   LC  V FR  GSS Y  RREP   C+STLES+AY+LEVLE T +  +AA  LR+AF+ MV  Q+ +  +    RF
Sbjct:   11 LILIDGTWAQAKKIVKTTPWLSV--------------------------------------------------LCTPVQFRDGGSSTYTIRREPMPHCLSTLESIAYSLEVLEATDQARAAAVSLRKAFAAMVRHQVRSADEVGNVRF 108          
BLAST of mRNA_H-elongata_contig89327.16433.1 vs. uniprot
Match: A0A7S2YAD0_9STRA (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YAD0_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 4.760e-11
Identity = 61/181 (33.70%), Postives = 86/181 (47.51%), Query Frame = 0
Query:    5 CLCSVLPEDAIATS-TQFLILQHPSEAKRQITGTVPLILLCLSNCRRVVMPHTGNAQFDDDSLRGLLGIDNREGDDISAPARPLLLFPCPDAEFLEDVASERHEQAAEALTMPPPAVVGGEIDGNSILRPTTLTPSGRRTERLGEDHGGGHQGASVCPPLVVLIDGTWSQARQILSRYPSL 184
            C+CS LP   ++T  T  LILQHP E +R+   TVPLI L L   + + + H+    FD + +R +        + I    R LLLFP PD+  L+D      +Q AE L  PP A +  +I  N+   P +L P                        L++LIDGTW+QAR++    P L
Sbjct:   82 CVCSALPVPKLSTHHTDILILQHPGEFRRKTFSTVPLIPLVLEPVQ-IAVGHS----FDPEMVRPIQ-------EAIQRGQRLLLLFPGPDSLALDDF---NDQQVAELLQPPPNASIPNKIHNNND--PESLPPPRN---------------------LLILIDGTWTQARRMARHSPKL 224          
BLAST of mRNA_H-elongata_contig89327.16433.1 vs. uniprot
Match: L1J958_GUITC (tRNA-uridine aminocarboxypropyltransferase n=2 Tax=Guillardia theta TaxID=55529 RepID=L1J958_GUITC)

HSP 1 Score: 70.5 bits (171), Expect = 6.110e-10
Identity = 45/110 (40.91%), Postives = 55/110 (50.00%), Query Frame = 0
Query:  193 GPGARGVRTSVIFSAASRRS---VDAXXXXXXXXXXXXXXXXTTEDGLCRAVMFRSAGSSGYGFRREPSRECISTLESVAYTLEVLEPTQEGLSAAGYLRRAFSTMVSTQ 299
            GPGA  + T  +  + S R+   VD                   E G    V F  AG SGY FR+EP + C+STLESVAY+L+ LE T EG  A  +L   FS MVS Q
Sbjct:  151 GPGAVDIETLQLDDSDSERTLIVVDGTWRQAGRVIREECIRRAVERGDVTRVQFARAGRSGYKFRKEPHQFCLSTLESVAYSLQYLEKTSEGERAVCHLMDTFSQMVSLQ 260          
BLAST of mRNA_H-elongata_contig89327.16433.1 vs. uniprot
Match: UPI0014027552 (DTW domain-containing protein 2 n=1 Tax=Petromyzon marinus TaxID=7757 RepID=UPI0014027552)

HSP 1 Score: 60.5 bits (145), Expect = 1.170e-6
Identity = 58/187 (31.02%), Postives = 79/187 (42.25%), Query Frame = 0
Query:    3 KVCLCSVLPEDAIATSTQFLILQHPSEAKRQITGTVPLILLCLS--NCRRVVMPHTGNAQFDDDSLRGLLGIDNREGDDISAPARPLLLFPCPDAEFLEDVASERHEQAAEALTMPPPAVVGGEIDGNSILRP---TTLTPSGRRTERLGEDHGGGHQGASV--CPPL--VVLIDGTWSQARQILSR 180
            KVCLC  LP   +  ST+  I+QHP+E  R +  TVPL+  CLS  +C  +V       +F +D    L          +      L+L+P P A  L D+        A A       ++G   D  +  +P     L P G        D       ASV    PL  +VLIDGTW QA+ +  R
Sbjct:   77 KVCLCPFLPAHPLEVSTRLYIVQHPAEESR-VLRTVPLLAACLSAHSCTVLV-----GRRFPEDRFPELA--------QVCRSPNTLVLYPGPGAVDLYDLVGASSTTCASAARESSGILLGTGDDSPAAAKPGRADALAPCGAVDPTTLADAPRVPTPASVNGAVPLFTLVLIDGTWRQAKDMFER 249          
BLAST of mRNA_H-elongata_contig89327.16433.1 vs. uniprot
Match: D5A8T4_PICSI (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Picea sitchensis TaxID=3332 RepID=D5A8T4_PICSI)

HSP 1 Score: 58.2 bits (139), Expect = 4.150e-6
Identity = 40/106 (37.74%), Postives = 58/106 (54.72%), Query Frame = 0
Query:    2 SKVCLCSVLPEDAIATSTQFLILQHPSEAKRQITGTVPLILLCLSNCRRVV--MPHTGNAQFDDDSLRGLLGIDNREGDDISAPARPLLLFPCPDAEFLEDVASER 105
            + VCLC+VLP +A+ TST+ +ILQHP E + +++ TVPLI  CL N + +V    H G++   D        I ++   + S     L LFP  +A  LE   S R
Sbjct:   25 ANVCLCNVLPSEALETSTRIIILQHPHELRHKLS-TVPLIQKCLHNSQVIVGRRLHMGSSPILD-------AICSQSDAEKSKCGHVLFLFPGEEATDLETWISNR 122          
BLAST of mRNA_H-elongata_contig89327.16433.1 vs. uniprot
Match: A0A448Z719_9STRA (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z719_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 2.740e-5
Identity = 81/344 (23.55%), Postives = 125/344 (36.34%), Query Frame = 0
Query:   15 IATSTQFLILQHPSEAKRQITGTVPLILLCLSN-----------CRRVVMPHTGNAQFDDDSLRGLL---------GIDNREGDDISAPARPLLLFPCPDAEFLED---VASERH-------------EQAAEALTMPPPAVVGGEIDGNSILRPTTLTPSGRRTERLGEDHGGGHQGASVCPPLVVLIDGTWSQARQILSRYPSLSSRKLSAVGPGARGVRTSVIFSAASRRSVDAXXXXXXXXXXXXXXXXTTEDGLCRAVMFRSAGSSGYGFRREPSRECISTLESVAYTLEVLEPTQEGLSAAGYLRRAFSTMVSTQLEARGDAKIPRFEGRKARAGYRR 322
            + T TQ ++LQHP+E +++ T TVPL+ L L              +  VM         D++               ++N + DD+    RP++LFP PDA  L+    + SE H             E+     +MP P     E    +I    T   S  ++ +            S     +VLIDGTWS+A++++ + P +                  V F+       DA                T + G  R++            RREP   C+STLE+    +  LE    G     +L +  S  V   L    +A+   F  R  R  Y R
Sbjct:  410 LLTQTQIVVLQHPNEFRKKHTSTVPLLKLVLGQQNVRVKVGYEFSKADVMAMXXXXTVTDETRTSERTCTNHDISDNVNNSDSDDVFE--RPIVLFPGPDALDLDRYVLLRSELHTTTPRNNTSGCKKEEPTSKDSMPSPGQQSTEAAAANIRNNDTKDNSRSKSIKR-----------SKKKTTLVLIDGTWSEAKRMIRKSPEVLE------------ACQMVKFAFDDDADADADE--------------TLQRGGSRSLY--------NAMRREPEDHCLSTLEACGIAISSLEGPDRGPRIRAHLLQVLSKHVQLHL---ANARENSFSVRSNRDTYDR 703          
BLAST of mRNA_H-elongata_contig89327.16433.1 vs. uniprot
Match: A0A7S3Z0B1_9EUKA (tRNA-uridine aminocarboxypropyltransferase (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z0B1_9EUKA)

HSP 1 Score: 55.5 bits (132), Expect = 3.730e-5
Identity = 57/210 (27.14%), Postives = 91/210 (43.33%), Query Frame = 0
Query:    3 KVCLCSVLPEDAIATSTQFLILQHPSEAKRQITGTVPLILLCLSNCRRVV--MPHTGNAQFDDDSL-----------RGLLGIDN-----REGDDISAPARPLLLFPCPDAEFLEDVA--------SERHEQAAEALTMPPPAVVGGEIDGNSILRPTTLTPSGRRTERLGEDHGGGHQGASVCPPLVVLIDGTWSQARQILSRYPSLSS 186
            KVC+CSVLP D I    + +++QHP EA +    +VP+I   + NC  VV  M   G++   D +L           +G L I++     ++GD+ S  +   +      +    D A        S R E+ A +          GE   N + R T           L +   GG    S+    ++L+DGTW  A+ IL++ P L++
Sbjct:   21 KVCVCSVLPSDKIRLGVEVIVVQHPDEAAKAQICSVPIIKAVVENCTVVVGKMFEKGHSDVLDTALSERGTVILYPGKGSLPIESFCLEGKKGDNKSKSSLAEVSNGESSSSKKGDGALPSGLERQSPRQEKNASSSYSDAHGPALGEGPVNIVKRETDENSD---NSALHDTSSGGKCRESI--KRLILVDGTWRNAKWILNKNPRLTT 225          
BLAST of mRNA_H-elongata_contig89327.16433.1 vs. uniprot
Match: A0A7S3Z0F6_9EUKA (tRNA-uridine aminocarboxypropyltransferase n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z0F6_9EUKA)

HSP 1 Score: 55.5 bits (132), Expect = 6.860e-5
Identity = 57/210 (27.14%), Postives = 91/210 (43.33%), Query Frame = 0
Query:    3 KVCLCSVLPEDAIATSTQFLILQHPSEAKRQITGTVPLILLCLSNCRRVV--MPHTGNAQFDDDSL-----------RGLLGIDN-----REGDDISAPARPLLLFPCPDAEFLEDVA--------SERHEQAAEALTMPPPAVVGGEIDGNSILRPTTLTPSGRRTERLGEDHGGGHQGASVCPPLVVLIDGTWSQARQILSRYPSLSS 186
            KVC+CSVLP D I    + +++QHP EA +    +VP+I   + NC  VV  M   G++   D +L           +G L I++     ++GD+ S  +   +      +    D A        S R E+ A +          GE   N + R T           L +   GG    S+    ++L+DGTW  A+ IL++ P L++
Sbjct:   21 KVCVCSVLPSDKIRLGVEVIVVQHPDEAAKAQICSVPIIKAVVENCTVVVGKMFEKGHSDVLDTALSERGTVILYPGKGSLPIESFCLEGKKGDNKSKSSLAEVSNGESSSSKKGDGALPSGLERQSPRQEKNASSSYSDAHGPALGEGPVNIVKRETDENSD---NSALHDTSSGGKCRESI--KRLILVDGTWRNAKWILNKNPRLTT 225          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig89327.16433.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7FT56_ECTSI7.980e-6343.71tRNA-uridine aminocarboxypropyltransferase n=2 Tax... [more]
A0A836CLP8_9STRA1.230e-1333.78tRNA-uridine aminocarboxypropyltransferase n=1 Tax... [more]
A0A7S2YAD0_9STRA4.760e-1133.70tRNA-uridine aminocarboxypropyltransferase n=1 Tax... [more]
L1J958_GUITC6.110e-1040.91tRNA-uridine aminocarboxypropyltransferase n=2 Tax... [more]
UPI00140275521.170e-631.02DTW domain-containing protein 2 n=1 Tax=Petromyzon... [more]
D5A8T4_PICSI4.150e-637.74tRNA-uridine aminocarboxypropyltransferase n=1 Tax... [more]
A0A448Z719_9STRA2.740e-523.55tRNA-uridine aminocarboxypropyltransferase n=1 Tax... [more]
A0A7S3Z0B1_9EUKA3.730e-527.14tRNA-uridine aminocarboxypropyltransferase (Fragme... [more]
A0A7S3Z0F6_9EUKA6.860e-527.14tRNA-uridine aminocarboxypropyltransferase n=2 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005636DTWSMARTSM01144DTW_2acoord: 3..304
e-value: 2.9E-22
score: 90.0
IPR005636DTWPFAMPF03942DTWcoord: 2..299
e-value: 1.2E-37
score: 129.6
NoneNo IPR availablePANTHERPTHR21392:SF0DTW DOMAIN-CONTAINING PROTEIN 2coord: 2..303
IPR039262DTW domain-containing protein 2PANTHERPTHR21392UNCHARACTERIZEDcoord: 2..303

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig89327contigH-elongata_contig89327:284..2276 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig89327.16433.1mRNA_H-elongata_contig89327.16433.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig89327 284..2276 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig89327.16433.1 ID=prot_H-elongata_contig89327.16433.1|Name=mRNA_H-elongata_contig89327.16433.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=323bp
ASKVCLCSVLPEDAIATSTQFLILQHPSEAKRQITGTVPLILLCLSNCRR
VVMPHTGNAQFDDDSLRGLLGIDNREGDDISAPARPLLLFPCPDAEFLED
VASERHEQAAEALTMPPPAVVGGEIDGNSILRPTTLTPSGRRTERLGEDH
GGGHQGASVCPPLVVLIDGTWSQARQILSRYPSLSSRKLSAVGPGARGVR
TSVIFSAASRRSVDAAAAAAATTGGAPRREETTEDGLCRAVMFRSAGSSG
YGFRREPSRECISTLESVAYTLEVLEPTQEGLSAAGYLRRAFSTMVSTQL
EARGDAKIPRFEGRKARAGYRRS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005636DTW
IPR039262DTWD2