mRNA_H-elongata_contig89297.16430.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig89297.16430.1 vs. uniprot
Match: A0A836CMS5_9STRA (Acyl-coenzyme A oxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMS5_9STRA) HSP 1 Score: 238 bits (608), Expect = 1.110e-71 Identity = 118/190 (62.11%), Postives = 138/190 (72.63%), Query Frame = 1
Query: 19 NGRILDQEIYWAYATIDEVLPTDVHMGMVIPALQYQTSPEQRERWLPLATSYKILGAYVQTELGHGSNVRALETTATFDKACLRARATQEFVIHSPTLTSTKVKKGERRERRLIRDIYWWPGGLGKTATHCILMAQLVIEGKTLGVHPFFIQLRSLTDHKPLPGITLGDIGPKLGFNSTDNGFCRRGELR 588
N + ++E WAYA IDEVLPTDVHM MVIPAL++QTS EQR RWLPLA S+KIL AYVQTELGHGSNVR LETTAT+D Q++ IHSPTLTSTK WWPGGLGKTATH +LMA++++ GK G+ PFF+Q+R + H PLPGI +GDIGPKLGFNSTDNGF R +R
Sbjct: 85 NMGLTEREFKWAYAAIDEVLPTDVHMAMVIPALEFQTSAEQRARWLPLAKSFKILCAYVQTELGHGSNVRGLETTATYDVNA------QQWDIHSPTLTSTK----------------WWPGGLGKTATHALLMARVIVNGKDHGISPFFLQIRDMGTHMPLPGIAIGDIGPKLGFNSTDNGFMRFHRVR 252
BLAST of mRNA_H-elongata_contig89297.16430.1 vs. uniprot
Match: A0A0P1AQI4_PLAHL (Peroxisomal acyl-coenzyme a n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AQI4_PLAHL) HSP 1 Score: 202 bits (513), Expect = 6.940e-62 Identity = 101/179 (56.42%), Postives = 124/179 (69.27%), Query Frame = 1
Query: 34 DQEIYWAYATIDEVLPTDVHMGMVIPALQYQTSPEQRERWLPLATSYKILGAYVQTELGHGSNVRALETTATFDKACLRARATQEFVIHSPTLTSTKVKKGERRERRLIRDIYWWPGGLGKTATHCILMAQLVIEGKTLGVHPFFIQLRSLTDHKPLPGITLGDIGPKLGFNSTDNGFC 570
DQ+I Y + E L DVH M IP L+ Q S EQR ++LPLA SYKI+GAY QTELGHGSNV+ +ET AT+DKA TQEF+I+SPTLTS K WWPGGLGKTATH I+ A+L+++G +GV F +Q+RSL DH+PLPGI +GDIGPK+GFN DNG+C
Sbjct: 92 DQQIL--YKALGEPLGFDVHRAMFIPTLENQGSDEQRAKYLPLAKSYKIIGAYAQTELGHGSNVQGIETIATYDKA------TQEFIINSPTLTSRK----------------WWPGGLGKTATHAIVHARLILDGNDVGVQAFLVQIRSLRDHRPLPGIEVGDIGPKVGFNGVDNGYC 246
BLAST of mRNA_H-elongata_contig89297.16430.1 vs. uniprot
Match: A0A225UMF2_9STRA (Peroxisomal acyl-coenzyme A oxidase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UMF2_9STRA) HSP 1 Score: 197 bits (501), Expect = 8.580e-61 Identity = 95/185 (51.35%), Postives = 125/185 (67.57%), Query Frame = 1
Query: 16 RNGRILDQEIYWAYATIDEVLPTDVHMGMVIPALQYQTSPEQRERWLPLATSYKILGAYVQTELGHGSNVRALETTATFDKACLRARATQEFVIHSPTLTSTKVKKGERRERRLIRDIYWWPGGLGKTATHCILMAQLVIEGKTLGVHPFFIQLRSLTDHKPLPGITLGDIGPKLGFNSTDNGFC 570
+NG D+E + E +P D+H M IP ++ Q + EQR +WLPLA Y+++GAY QTELGHGSNV+ +ET AT+DKA TQEF+I+SPTLTS K WWPGGLGKTATH I++A+L+++GK GV F +Q+RSL DH+P+PGI + DIGPK+GFN+ DNG C
Sbjct: 25 QNGDYTDKEQAILLDALGEQVPFDLHRNMFIPTIETQGTDEQRAKWLPLAKKYRVIGAYAQTELGHGSNVQGIETVATYDKA------TQEFIINSPTLTSRK----------------WWPGGLGKTATHAIVIARLLLDGKDEGVQSFIVQIRSLEDHQPMPGIEVRDIGPKIGFNAVDNGDC 187
BLAST of mRNA_H-elongata_contig89297.16430.1 vs. uniprot
Match: A0A7S4IFR4_9EUKA (Acyl-coenzyme A oxidase n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IFR4_9EUKA) HSP 1 Score: 207 bits (527), Expect = 5.590e-60 Identity = 100/189 (52.91%), Postives = 128/189 (67.72%), Query Frame = 1
Query: 22 GRILDQEIYWAYATIDEVLPTDVHMGMVIPALQYQTSPEQRERWLPLATSYKILGAYVQTELGHGSNVRALETTATFDKACLRARATQEFVIHSPTLTSTKVKKGERRERRLIRDIYWWPGGLGKTATHCILMAQLVIEGKTLGVHPFFIQLRSLTDHKPLPGITLGDIGPKLGFNSTDNGFCRRGELR 588
G D E++W +D LPT++H M +P + Q S EQ+ WLPLA +KI G Y QTELGHG+NV +ETTAT+DK+ T+EFVI+SPT+TSTK WWPGGLGKT+THC+LMA+L+I+ K GVH F++QLRSL DH PLPGITLGDIGPK+G+ + DNG+ R +R
Sbjct: 82 GNREDLEVFWD--AVDMNLPTNLHYAMFVPTIMGQASVEQQSEWLPLALPFKIYGTYAQTELGHGTNVAGIETTATYDKS------TKEFVINSPTVTSTK----------------WWPGGLGKTSTHCVLMARLIIDDKDYGVHAFYVQLRSLEDHMPLPGITLGDIGPKMGYEAVDNGYLRFDHVR 246
BLAST of mRNA_H-elongata_contig89297.16430.1 vs. uniprot
Match: K3WP98_GLOUD (Acyl-coenzyme A oxidase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WP98_GLOUD) HSP 1 Score: 205 bits (522), Expect = 3.400e-59 Identity = 102/178 (57.30%), Postives = 124/178 (69.66%), Query Frame = 1
Query: 37 QEIYWAYATIDEVLPTDVHMGMVIPALQYQTSPEQRERWLPLATSYKILGAYVQTELGHGSNVRALETTATFDKACLRARATQEFVIHSPTLTSTKVKKGERRERRLIRDIYWWPGGLGKTATHCILMAQLVIEGKTLGVHPFFIQLRSLTDHKPLPGITLGDIGPKLGFNSTDNGFC 570
QE+ WA + E LP D+H GM +P ++ Q + EQ+ +WL A YKILGAY QTELGHGSNV+ +ETTA FDKA TQEF+I+SPTLTS K WWPG LGKTATH I+ A+L +EGK +GVH F +QLRSL DH+PLPGI +GDIGPK+GFNS DNG+C
Sbjct: 97 QELRWA---LGENLPLDLHDGMFVPVIETQATDEQKGKWLQAALDYKILGAYAQTELGHGSNVQGIETTAHFDKA------TQEFIINSPTLTSRK----------------WWPGALGKTATHAIVYARLFLEGKDVGVHAFMMQLRSLKDHQPLPGIEVGDIGPKVGFNSIDNGYC 249
BLAST of mRNA_H-elongata_contig89297.16430.1 vs. uniprot
Match: A0A2P4XD30_9STRA (Peroxisomal acyl-coenzyme A oxidase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XD30_9STRA) HSP 1 Score: 204 bits (518), Expect = 9.410e-59 Identity = 103/186 (55.38%), Postives = 127/186 (68.28%), Query Frame = 1
Query: 31 LDQEIYWAYATIDEVLPTDVHMGMVIPALQYQTSPEQRERWLPLATSYKILGAYVQTELGHGSNVRALETTATFDKACLRARATQEFVIHSPTLTSTKVKKGERRERRLIRDIYWWPGGLGKTATHCILMAQLVIEGKTLGVHPFFIQLRSLTDHKPLPGITLGDIGPKLGFNSTDNGFCRRGELR 588
LDQ+I Y + E L DVH M IP L+ Q + EQR +WLPLA SYKILGAY QTELGHGSNV+ +ET AT+DKA TQEF+I SPTLTS K WWPGGLGKTA H I+ ++L ++GK +GV F +Q+RSL DH+PLPGI +GDIGPK+GFN+ DNG+C ++R
Sbjct: 99 LDQQIL--YKALGEPLGFDVHRAMFIPTLENQGTDEQRAKWLPLAKSYKILGAYAQTELGHGSNVQGIETVATYDKA------TQEFIIDSPTLTSRK----------------WWPGGLGKTANHAIVHSRLYLDGKDVGVQAFLVQIRSLEDHEPLPGIEVGDIGPKVGFNAIDNGYCAFHKIR 260
BLAST of mRNA_H-elongata_contig89297.16430.1 vs. uniprot
Match: A0A4D9DB85_9STRA (Acyl-coenzyme A oxidase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DB85_9STRA) HSP 1 Score: 205 bits (522), Expect = 9.680e-59 Identity = 100/186 (53.76%), Postives = 126/186 (67.74%), Query Frame = 1
Query: 13 RRNGRILDQEIYWAYATIDEVLPTDVHMGMVIPALQYQTSPEQRERWLPLATSYKILGAYVQTELGHGSNVRALETTATFDKACLRARATQEFVIHSPTLTSTKVKKGERRERRLIRDIYWWPGGLGKTATHCILMAQLVIEGKTLGVHPFFIQLRSLTDHKPLPGITLGDIGPKLGFNSTDNGFC 570
RR G Q + +DE+ PTDVH M IP+L +QT+PEQR +WLPLA +++I+ AY QTELGHGSNVRALET AT++ + +Q F++HSP L S K WWPGGLGK+ATH I++A+L++ GK G+H F +QLR L DH PLPG+TLGDIGPKLGF S DNGFC
Sbjct: 92 RRLGIPFTQMLDILNVALDEITPTDVHTKMAIPSLMHQTTPEQRAKWLPLAENFRIICAYAQTELGHGSNVRALETIATYEPS------SQSFILHSPRLESAK----------------WWPGGLGKSATHAIVLARLLLGGKDRGLHSFIVQLRDLRDHTPLPGVTLGDIGPKLGFMSVDNGFC 255
BLAST of mRNA_H-elongata_contig89297.16430.1 vs. uniprot
Match: H3GA52_PHYRM (Acyl-coenzyme A oxidase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GA52_PHYRM) HSP 1 Score: 203 bits (516), Expect = 2.040e-58 Identity = 99/191 (51.83%), Postives = 128/191 (67.02%), Query Frame = 1
Query: 16 RNGRILDQEIYWAYATIDEVLPTDVHMGMVIPALQYQTSPEQRERWLPLATSYKILGAYVQTELGHGSNVRALETTATFDKACLRARATQEFVIHSPTLTSTKVKKGERRERRLIRDIYWWPGGLGKTATHCILMAQLVIEGKTLGVHPFFIQLRSLTDHKPLPGITLGDIGPKLGFNSTDNGFCRRGELR 588
+N D+E + E +P D+H GM IP ++ Q + QR +WLPLA +YKI+GAY QTELGHGSNV+ +ET AT+DK TQEFVIHSPTLTS K WWPGGLGKTATH I++A+L+++GK +GV F +Q+RSL DHKPLPG+ + DIGPK+GFN+ DNG C ++R
Sbjct: 83 QNANYTDEEQAILLGALGEQVPFDLHRGMFIPTIESQGTDNQRAKWLPLAKNYKIIGAYAQTELGHGSNVQGIETIATYDKF------TQEFVIHSPTLTSRK----------------WWPGGLGKTATHAIVIARLLLDGKDVGVQSFIVQVRSLEDHKPLPGVEVRDIGPKMGFNAIDNGDCSFDKVR 251
BLAST of mRNA_H-elongata_contig89297.16430.1 vs. uniprot
Match: H3G5D4_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G5D4_PHYRM) HSP 1 Score: 195 bits (496), Expect = 4.270e-58 Identity = 97/186 (52.15%), Postives = 125/186 (67.20%), Query Frame = 1
Query: 31 LDQEIYWAYATIDEVLPTDVHMGMVIPALQYQTSPEQRERWLPLATSYKILGAYVQTELGHGSNVRALETTATFDKACLRARATQEFVIHSPTLTSTKVKKGERRERRLIRDIYWWPGGLGKTATHCILMAQLVIEGKTLGVHPFFIQLRSLTDHKPLPGITLGDIGPKLGFNSTDNGFCRRGELR 588
+DQ+I YA + E +VH M +P L+ Q EQR +WLPLA ++KILGAY QTELGHGSNV+ +ET AT+DKA TQEFVI SPTLTS K WWPGGLGKTA H ++ A+L ++G+ +GV F +Q+RS+ DH+PLPGI +GDIGPK+GFN DNG+C ++R
Sbjct: 34 VDQQIL--YAAMGEPTAIEVHRTMFVPTLENQGDDEQRAKWLPLARNFKILGAYAQTELGHGSNVQGIETVATYDKA------TQEFVIDSPTLTSRK----------------WWPGGLGKTANHAMVHARLFLDGEDVGVQAFLVQIRSMEDHEPLPGIEVGDIGPKVGFNGVDNGYCAFHKIR 195
BLAST of mRNA_H-elongata_contig89297.16430.1 vs. uniprot
Match: A0A6A3IS25_9STRA (Acyl-coenzyme A oxidase n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3IS25_9STRA) HSP 1 Score: 201 bits (512), Expect = 7.890e-58 Identity = 103/186 (55.38%), Postives = 124/186 (66.67%), Query Frame = 1
Query: 31 LDQEIYWAYATIDEVLPTDVHMGMVIPALQYQTSPEQRERWLPLATSYKILGAYVQTELGHGSNVRALETTATFDKACLRARATQEFVIHSPTLTSTKVKKGERRERRLIRDIYWWPGGLGKTATHCILMAQLVIEGKTLGVHPFFIQLRSLTDHKPLPGITLGDIGPKLGFNSTDNGFCRRGELR 588
+DQ+I Y + E L DVH M +P L+ Q QR +WLPLA SYKILGAY QTELGHGSNV+ +ET ATFDKA TQEFV+ SPTLTS K WWPGGLGKTA H I+ A+L ++GK +GV F +QLRSL DH+PLPGI +GDIGPK+GFN DNG+C ++R
Sbjct: 91 VDQQIL--YKAMAEPLGFDVHRAMFVPTLENQGDDAQRAKWLPLAKSYKILGAYAQTELGHGSNVQGIETVATFDKA------TQEFVVDSPTLTSRK----------------WWPGGLGKTANHAIVHARLFLDGKDVGVQAFLVQLRSLEDHQPLPGIEVGDIGPKVGFNGVDNGYCAFHKVR 252 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig89297.16430.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig89297.16430.1 >prot_H-elongata_contig89297.16430.1 ID=prot_H-elongata_contig89297.16430.1|Name=mRNA_H-elongata_contig89297.16430.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=196bp MSRDRRNGRILDQEIYWAYATIDEVLPTDVHMGMVIPALQYQTSPEQRERback to top mRNA from alignment at H-elongata_contig89297:1234..2607+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig89297.16430.1 ID=mRNA_H-elongata_contig89297.16430.1|Name=mRNA_H-elongata_contig89297.16430.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1374bp|location=Sequence derived from alignment at H-elongata_contig89297:1234..2607+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig89297:1234..2607+ >mRNA_H-elongata_contig89297.16430.1 ID=mRNA_H-elongata_contig89297.16430.1|Name=mRNA_H-elongata_contig89297.16430.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1176bp|location=Sequence derived from alignment at H-elongata_contig89297:1234..2607+ (Himanthalia elongata Himel1 dioecious)back to top |