prot_H-elongata_contig89255.16427.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig89255.16427.1
Unique Nameprot_H-elongata_contig89255.16427.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length97
Homology
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BLAST of mRNA_H-elongata_contig89255.16427.1 vs. uniprot
Match: D8LTT2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTT2_ECTSI)

HSP 1 Score: 108 bits (269), Expect = 2.590e-25
Identity = 65/97 (67.01%), Postives = 74/97 (76.29%), Query Frame = 0 
Query:    1 QTKSVLVRQLERELASTVSALGKERRRRKAETEVFKAKLEEARATTRKREEELHRREVMAKTIMNELEILQSRCDRLSASREEKVEEAEKVMGRLRE 97
            + +SVLV+QLERELASTVSAL  ERR R+ +TE  + KLEE RAT   RE EL RRE M  T+M ELE LQSRCDRL ASREE+ EEA+K M RLRE
Sbjct:  526 EEQSVLVKQLERELASTVSALKDERRERRGQTETLRRKLEETRATVGDREAELQRRERMTTTLMGELEALQSRCDRLVASREERAEEADKTMARLRE 622
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BLAST of mRNA_H-elongata_contig89255.16427.1 vs. uniprot
Match: A0A6H5KDC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDC5_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 1.670e-24
Identity = 64/97 (65.98%), Postives = 73/97 (75.26%), Query Frame = 0 
Query:    1 QTKSVLVRQLERELASTVSALGKERRRRKAETEVFKAKLEEARATTRKREEELHRREVMAKTIMNELEILQSRCDRLSASREEKVEEAEKVMGRLRE 97
            + +SVLV+QLERELASTVSAL  ERR R+ +TE  + KLEE RA    RE EL RRE M  T+M ELE LQSRCDRL ASREE+ EEA+K M RLRE
Sbjct:  517 EEQSVLVKQLERELASTVSALKDERRERRGQTETLRRKLEETRAAVGYREAELQRRERMTTTLMGELEALQSRCDRLVASREERAEEADKTMARLRE 613
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig89255.16427.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LTT2_ECTSI2.590e-2567.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KDC5_9PHAE1.670e-2465.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 36..56
NoneNo IPR availableCOILSCoilCoilcoord: 60..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig89255contigH-elongata_contig89255:916..1774 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig89255.16427.1mRNA_H-elongata_contig89255.16427.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig89255 916..1774 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig89255.16427.1 ID=prot_H-elongata_contig89255.16427.1|Name=mRNA_H-elongata_contig89255.16427.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=97bp
QTKSVLVRQLERELASTVSALGKERRRRKAETEVFKAKLEEARATTRKRE
EELHRREVMAKTIMNELEILQSRCDRLSASREEKVEEAEKVMGRLRE
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