mRNA_H-elongata_contig89249.16426.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig89249.16426.1
Unique NamemRNA_H-elongata_contig89249.16426.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig89249.16426.1 vs. uniprot
Match: A0A6H5L442_9PHAE (Peptidase_S26 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L442_9PHAE)

HSP 1 Score: 397 bits (1019), Expect = 8.810e-131
Identity = 241/461 (52.28%), Postives = 298/461 (64.64%), Query Frame = 1
Query:    1 LFFLFSQRSEGSALGDILAPEDTQEGVSSAAKSAMASGSISIEPPSFLKRLFSVPRNIRRTVGVGDVVVPIIGARDGWGGIRQGLVRRGIFPGVEYRILEVTT-----------STESGSER---------------------------------------VLSSAQEASEDAFDDGDLTFTMRPVYPLVAKLER-EWPVRVPAREFPVMLTPFSYNAATAWASLTTSLSLLTVGFVASQALTLSVIPSRSMEPTLQVGDVVLVEKVSRAAVIRRDDIVFFRAPPALRDVVASAGGTLNTRDLFVKRVAALPGDVVSVSADGVVEVESARSPPASAAPR-TMRS----SGKSRVSEMILGDTSSVVEALGEEGRGAMISTVSTSPRVRALPRTASAIAVADGVRQRIQVIENKRLPPGTIFVLGDNAEVSMDSRVWGELDEGQIVGHPLLKVFPLRSFGLL 1215
            L  LF +R E  ALGD+L PED   G             +S+EPP FLKR+FS+P+N+RRT   GDVVVP+IGARDGWGGIRQ    +GI+PGVEYRILE++            ST++ S+                                        VL+SA++A  ++FDDG L FTMRP+YPLVA+LER +WPVRVPAREFPVMLTPFSYNAATAWA+ TTSLSLL+VGFV SQALTLSVI S SMEPTLQVGDVVLVEKVSR+ +++ +DIV+FR PP L+D+V+ AGGTL+  DLFVKRVAAL GD V+VSADG V+V +A     +  P+ T R+    S     S++ILGD        G+EG  A ++                 +A+ D V QRI  ++ K LP G++FVLGDN   SMDSRVWG+LD+G+IVGH LL+VFP RSFGLL
Sbjct:   84 LTMLFEKRPEERALGDVLIPEDAPGGAGEGGGDDAIG--VSVEPPGFLKRVFSIPKNVRRTAAAGDVVVPVIGARDGWGGIRQAS-NQGIYPGVEYRILEISVFPTARTPPTGDSTKASSDSAAAVAPYLSSXXXXXXXXXXXXXXXXXXXQPDLDAEPTAVLASARDAPPESFDDGSLVFTMRPIYPLVARLERGDWPVRVPAREFPVMLTPFSYNAATAWAAFTTSLSLLSVGFVLSQALTLSVINSHSMEPTLQVGDVVLVEKVSRSFLVKPNDIVYFRPPPVLQDIVSRAGGTLSPSDLFVKRVAALSGDTVTVSADGSVDVRAAAGGGITRLPKGTNRADNGGSAAGGESDVILGDG-----VAGQEGSAAAVAAAKGGTLAE------EKVALPDSVLQRITRLDEKVLPSGSVFVLGDNPAASMDSRVWGQLDKGEIVGHALLRVFPPRSFGLL 530          
BLAST of mRNA_H-elongata_contig89249.16426.1 vs. uniprot
Match: A0A0G4EFP7_VITBC (Mitochondrial inner membrane protease subunit n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EFP7_VITBC)

HSP 1 Score: 186 bits (471), Expect = 1.360e-50
Identity = 136/350 (38.86%), Postives = 179/350 (51.14%), Query Frame = 1
Query:  166 RNIRRTVGVGDVVVPIIGARDGWGGIRQGLVRRGIFPGVEYRILEVTTSTESGSERVLSSAQEASEDAFDDGDLTFTMRPVYPLVAKLEREWPVRVPAREFPVMLTPFSYNAATAWASLTTSLSLLTVGFVASQALTLSVIPSRSMEPTLQVGDVVLVEKVSRAA-VIRRDDIVFFRAPPALRDVVASAGGTLNTRDLFVKRVAALPGDVVSVSADGVVEVESARSP-PASAAPRTMRSSGKSRVSEMILGDTSSVVEALGEEGRGAMISTVSTSPRVRALPRTASAIAVADGVRQRIQVIENKRLPPGTIFVLGDNAEVSMDSRVWGELDEGQIVGHPLLKVFPLRSFG 1209
            +++RR +  G  +VP+IGAR GW  IR+ + R+G++PGV+YR+  +         R                D   T+RP Y LV KLER+WPV +   E P+ LTP  YN AT  ++L ++  LL V  VASQ  +L  IPS SMEPTL  GDV+LVEKVSR     +  DIV F  P  LR  V  AGG L   DLFVKRVAA  GD V+V  +G+  +       P    P T             +G  +    A G   R A+        R  A P    A +          V +   L  G ++VLGDN   S+DSR+WGEL E +IVGHP++++FP   FG
Sbjct:  102 KDMRREIREGGDIVPLIGARPGWAAIRENMFRKGVYPGVDYRVERIDVRANGDPIR----------------DAVITVRPRYRLVDKLERQWPVTIAMSEVPIFLTPRMYNTATLISTLLSAAQLLAVALVASQFCSLYYIPSYSMEPTLHKGDVLLVEKVSRLVRPPKNGDIVLFNPPEQLRTFVRQAGGQLAPGDLFVKRVAATQGDRVTVD-NGLPTINGHTYVYPEPEEPPT-------------IGSDAPPARADGSMQRLAI-------GRGFAWPYAGEAPSQ--------WVADECVLGSGAVYVLGDNPVRSVDSRLWGELRESEIVGHPVIRLFPWGRFG 406          
BLAST of mRNA_H-elongata_contig89249.16426.1 vs. uniprot
Match: A0A835YRZ1_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRZ1_9STRA)

HSP 1 Score: 189 bits (481), Expect = 3.160e-49
Identity = 134/312 (42.95%), Postives = 159/312 (50.96%), Query Frame = 1
Query:  277 GVEYRILEVTTSTESGSERVLSSAQEASEDAFDDGDLTFTMRPVYPLVAKLEREWPVRVPAREFPVMLTPFSYNAATAWASLTTSLSLLTVGFVASQALTLSVIPSRSMEPTLQVGDVVLVEKVSRAAVIRRDDIVFFRAPPALRDVVASAGGT-LNTRDLFVKRVAALPGDVVSVSADGVVEVESARSPPASAAPRTMRSSGKSRVSEMILGDTSSVVEALGEEGRGAMISTVSTSPRVRALPRTASAIAVADGVRQRIQVIENKRLPP----GTIFVLGDNAEVSMDSRVWGELDEGQIVGHPLLKVFPL 1197
            GVEYR L +T          L S  +A  +AF+ GDL   +RP+YPL+ +LER WPV V AR+ P+ LT F+YN ATAWA+L                LTLS IPSRSMEP L+ GDVVLVEKVSR A++RR ++VFF  PPALR  VA AGG  L   DLFVKRVAAL GD V+V+ DG   V  A                              +V   G+  R A         R R L R A                           G+ FVLGDN   S+DSRVWG+L    IVG PLL+VFPL
Sbjct:    5 GVEYRCLGITCGGAP-----LDSVADAPPNAFEAGDLLLQLRPIYPLIPRLERAWPVTVAARDVPIALTAFAYNVATAWAALXXXXXXXXXXXXXXXTLTLSFIPSRSMEPVLRPGDVVLVEKVSRGALLRRGEVVFFAPPPALRAAVADAGGAPLRGGDLFVKRVAALTGDDVAVARDGETRVRGA------------------------------LVRGAGDLPRAA---------RSRLLLREAXXXXXXXXXXXXXXXXXXXXXXXXXXAGSAFVLGDNPLHSVDSRVWGDLPYSNIVGRPLLRVFPL 272          
BLAST of mRNA_H-elongata_contig89249.16426.1 vs. uniprot
Match: A0A448ZBV4_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZBV4_9STRA)

HSP 1 Score: 181 bits (460), Expect = 2.690e-47
Identity = 128/346 (36.99%), Postives = 180/346 (52.02%), Query Frame = 1
Query:  181 TVGVGDVVVPIIGARDGWGGIRQGLVRRGIFPGVEYRILEVTTSTESGSERVLSSAQEASEDAFDDGDLTFTMRPVYPLVAKLEREWPVRVPAREFPVMLTPFSYNAATAWASLTTSLSLLTVGFVASQALTLSVIPSRSMEPTLQVGDVVLVEKVSRAAVIRRD---DIVFFRAPPALRDVVASAGGTLNTRDLFVKRVAALPGDVVSVSADGVVEVESARSPPASAAPRTMRSSGKSRVSEMILGDTSSVVEALGEEGRGAMISTVSTSPRVRALPRTASAIAVADGVRQRIQVIENKRLPPGTIFVLGDNAEVSMDSRVWGELDEGQIVGHPLLKVFPLRSFG 1209
            +V VG VVVP++         R  +  +G +PGVEYRIL +      G ER  S                + ++PVYPLVA+LER WPVRV  R+ P + TP  YN  +A+ SL T+ S L V F+ SQA++L  IPS+SM+PTL+VGDV+LV+KVS     R++   D+V F  P  L+++VA  GG L++RDLFVKR+AA PGD V+V  DG V+V                                      G++              V A  R          + + I+  E+K +    +FV+GD + VS+DSRVWG L+   IVG P+++++PL  FG
Sbjct:  341 SVRVGKVVVPVLSRLSQ----RPKMFEQGAYPGVEYRILRILDR--DGRERFTSCP-----------GADYELKPVYPLVAQLERPWPVRVNERDIPKLFTPSMYNLLSAFGSLFTAASGLFVAFLLSQAISLFFIPSKSMDPTLKVGDVLLVDKVSSRTPFRKNEVGDMVLFSPPSRLQEIVAKNGGNLSSRDLFVKRIAASPGDRVTVYKDGKVDVN-------------------------------------GQD--------------VVAGRRDLCEAEPLRLIEKYIEPREDKIIDQKEVFVMGDCSSVSVDSRVWGSLEAENIVGRPIVRIWPLDRFG 618          
BLAST of mRNA_H-elongata_contig89249.16426.1 vs. uniprot
Match: B7G479_PHATC (Mitochondrial inner membrane protease subunit n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G479_PHATC)

HSP 1 Score: 169 bits (428), Expect = 6.210e-43
Identity = 135/351 (38.46%), Postives = 182/351 (51.85%), Query Frame = 1
Query:  184 VGVGDVVVPIIGARDGWGGIRQGLVRRGIFPGVEYRILEVTTSTESGSERVLSSAQEASEDAFDDGDLTFTMRPVYPLVAKLEREWPVRVPAREFPVMLTPFSYNAATAWASLTTSLSLLTVGFVASQALTLSVIPSRSMEPTLQVGDVVLVEKVSRA-----AVIRRDDIVFFRAPPALRD-VVASAGGTLNTRDLFVKRVAALPGDVVSVSADGVVEVESARSPPASAAPRTMRSSGKSRVSEMILGDTSSVVEALGEEGRGAMISTVSTSPRVRALPRTASAIAVADGVRQRIQVIENKRLPPGTIFVLGDNAEVSMDSRVWGELDEGQIVGHPLLKVFPLRSFGLLP 1218
            V VG +VVP++         R  + ++G +PGVEYRIL +    +  + R L  +Q  ++         + ++PVYPLV +LER WPVRV  R+ P +LTP  YN  +A  SL T+L+ L V FV SQA++L VIPS SM PTL  GDVVLV+K++         I   D+VFF  P  L+D VV S G  L  RDLFVKRVAA PGDV++V   G V V  A        P   R        E    +   ++EA  +                +A P         DG         N R+ PG + VLGD A VS+DSRVWG L +  IVG P+++++P   +G +P
Sbjct:  301 VRVGTIVVPVLQKL----AQRPRMFQQGAYPGVEYRILRII---DPHTNRDLFYSQPGAD---------YELKPVYPLVRQLERPWPVRVNERDIPKLLTPTMYNTVSAVGSLLTALTGLLVAFVLSQAVSLFVIPSLSMAPTLAKGDVVLVDKLTPRFWGPRTNIPVGDVVFFHPPEPLQDMVVRSTGRRLAPRDLFVKRVAAGPGDVLTVDPSGSVRVNGAT-------PAVAR--------ETCEAEPLRLIEAYLK----------------KASPDN------PDGA--------NVRIGPGQVAVLGDCASVSIDSRVWGPLPQNDIVGRPVVRLWPPSRWGPVP 590          
BLAST of mRNA_H-elongata_contig89249.16426.1 vs. uniprot
Match: A0A1Z5JWA6_FISSO (Mitochondrial inner membrane protease subunit n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JWA6_FISSO)

HSP 1 Score: 156 bits (394), Expect = 9.790e-39
Identity = 121/351 (34.47%), Postives = 179/351 (51.00%), Query Frame = 1
Query:  190 VGDVVVPIIGARDGWGGIRQGLVRRGIFPGVEYRILEVTTSTESGSERVLSSAQEASEDAFDDGDLTFTMRPVYPLVAKLEREWPVRVPAREFPVMLTPFSYNAATAWASLTTSLSLLTVGFVASQALTLSVIPSRSMEPTLQVGDVVLVEKVSRAAVIRRD---------DIVFFRAPPALRDVVASAGGT-LNTRDLFVKRVAALPGDVVSVS-ADGVVEVESARSPPASAAPRTMRSSGKSRVSEMILGDTSSVVEALGEEGRGAMISTVSTSPRVRALPRTASAIAVADGVRQRIQVIENKRLPPGTIFVLGDNAEVSMDSRVWGELDEGQIVGHPLLKVFPLRSFG 1209
            VG +VVPI+ +       R  + R+G +PGVEYRIL +    E+G++   S              + + ++P+YPLV +LER WPVRV  R+ P + TP  YN  +A  SL T+++ L   F+ SQA+++ VIPSRSMEPTLQVGDV+LV+KV+     + +         +I+ F    +L+D+V  +GG  L  R+LFVKRVAA PG  + ++ A G VE++  +       P   R                   +  GEE             R+               + + ++  +  ++ P  + VLGD + VS+DSRVWG L    IVG PLL+V+PL   G
Sbjct:  213 VGRIVVPILRSL----AERPAMFRQGTYPGVEYRILRII-DPETGADLFYSRP-----------GVDYELKPIYPLVQQLERLWPVRVNERDIPKLYTPAMYNGISAVGSLLTAVTGLLAAFLVSQAISIFVIPSRSMEPTLQVGDVLLVDKVTPRLTNKLNLNKYNDWVGNIILFHPTESLQDIVLKSGGRKLTDRELFVKRVAAGPGSTLKITDASGAVEIDGRK-------PLERR-------------------DFCGEE-----------PTRL---------------IEKFLRQGDEFQVGPKQVAVLGDCSSVSIDSRVWGPLPTDNIVGRPLLRVWPLSRVG 495          
BLAST of mRNA_H-elongata_contig89249.16426.1 vs. uniprot
Match: A0A1Z5KRR1_FISSO (Mitochondrial inner membrane protease subunit n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KRR1_FISSO)

HSP 1 Score: 152 bits (385), Expect = 1.660e-38
Identity = 122/353 (34.56%), Postives = 178/353 (50.42%), Query Frame = 1
Query:  184 VGVGDVVVPIIGARDGWGGIRQGLVRRGIFPGVEYRILEVTTSTESGSERVLSSAQEASEDAFDDGDLTFTMRPVYPLVAKLEREWPVRVPAREFPVMLTPFSYNAATAWASLTTSLSLLTVGFVASQALTLSVIPSRSMEPTLQVGDVVLVEKVSRAAVIRRD---------DIVFFRAPPALRDVVASAGGT-LNTRDLFVKRVAALPGDVVSVS-ADGVVEVESARSPPASAAPRTMRSSGKSRVSEMILGDTSSVVEALGEEGRGAMISTVSTSPRVRALPRTASAIAVADGVRQRIQVIENKRLPPGTIFVLGDNAEVSMDSRVWGELDEGQIVGHPLLKVFPLRSFG 1209
            V VG +VVPI+         R  + R+G +PGVEYRIL +    E+G++   S              + + ++P+YPLV +LER WPVRV  ++ P + TP  YN  +A  SL T++  L   F+ SQA+++ VIPSRSMEPTLQVGDV+LV+K++     + +          IV FR   +L+D+V  +GG  L  R+LFVKRVAA PG  + ++ A G VE++  +       P   R                   +  GEE             R+               + + ++  +  ++ P  + VLGD + VS+DSRVWG L    IVG PLL+V+PL   G
Sbjct:   79 VRVGRIVVPILRNL----AERPAMFRQGTYPGVEYRILRII-DPETGADLFYSRP-----------GVDYELKPIYPLVQQLERLWPVRVNEKDIPRLYTPAMYNGLSAIGSLFTAVMGLLAAFLVSQAISIFVIPSRSMEPTLQVGDVLLVDKLTPRLTNKLNLNKYSEWVGYIVLFRPTESLQDIVLQSGGRKLTDRELFVKRVAAGPGSTLKITDASGAVEIDGRK-------PLERR-------------------DFCGEE-----------PTRL---------------IEKFLRQGDEFQVGPKQVAVLGDCSSVSIDSRVWGPLPTDNIVGRPLLRVWPLSRVG 363          
BLAST of mRNA_H-elongata_contig89249.16426.1 vs. uniprot
Match: A0A7S4KZX7_GUITH (Mitochondrial inner membrane protease subunit (Fragment) n=3 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KZX7_GUITH)

HSP 1 Score: 156 bits (395), Expect = 1.720e-38
Identity = 124/353 (35.13%), Postives = 175/353 (49.58%), Query Frame = 1
Query:  163 PRNIRRTVGVGDVVVPIIG-ARDGWGGIRQGLVRRGIFPGVEYRILEVTTSTESGSERVLSSAQEASEDAFDDGDLTFT----------MRPVYPLVAKLEREWPVRVPAREFPVMLTPFSYNAATAWASLTTSLSLLTVGFVASQALTLSVIPSRSMEPTLQVGDVVLVEKVS-RAAV-IRRDDIVFFRAPPALRDVVASAGGTLNTRDLFVKRVAALPGDVVSVSADGVVEVESARSPPASAAPRTMRSSGKSRVSEMILGDTSSVVEALGEEGRGAMISTVSTSPRVRALPRTASAIAVADGVRQRIQVIENKRLPPGTIFVLGDNAEVSMDSRVWGELDEGQIVGHPLL 1182
            P ++R+++  G V VP +G  R  W   R  L  +G++PG+EYRI+ +                   EDA +DG + F+          +RP+Y +   L+R WPVRV   E PV +T   YN AT       SL LL  G +A +A++L  IPSRSMEPT+  GD+++VEK++ R  V ++R++I+ F  P  L  +V S GG L   DLFVKRVA LP +   VS DG V ++                 GKS  SE +L +  ++ E                 P  R    T+S I   +GV           +P  ++ VLGD   VS+DSRVWG LD  ++ G PLL
Sbjct:  286 PEDVRKSLRCGQVFVPSLGIGRADWRRRRDELFLKGVYPGLEYRIMGM-------------------EDA-EDGTMIFSASSSKNPILKVRPIYAVRKDLDRSWPVRVSMGEIPVAVTQAMYNTATLIIVTMASLGLLMSGLIAREAISLYKIPSRSMEPTIMAGDLLVVEKMTARLGVPLKRNEIILFSPPEELERIVRSNGGRLRGGDLFVKRVAGLPHESFKVSGDGRVLLD-----------------GKS--SESLLAERKNLCE-----------------PDKRTGEATSSRILPKEGV-----------IPDKSLLVLGDCKAVSVDSRVWGPLDASKVKGRPLL 571          
BLAST of mRNA_H-elongata_contig89249.16426.1 vs. uniprot
Match: A0A7S1CZJ0_CYCTE (Mitochondrial inner membrane protease subunit n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CZJ0_CYCTE)

HSP 1 Score: 143 bits (360), Expect = 4.160e-36
Identity = 103/297 (34.68%), Postives = 144/297 (48.48%), Query Frame = 1
Query:  391 FTMRPVYPLVAKLEREWPVRVPAREFPVMLTPFSYNAATAWASLTTSLSLLTVGFVASQALTLSVIPSRSMEPTLQVGDVVLVEKVSRAAVIRRD---DIVFFRAPPALRDVVASAGGTLNTRDLFVKRVAALPGDVVSVSADGVVEVESARSPPASAAPRTMRSSGKSRVSEMILGDTSSVVEALGEEGRGAMISTVSTSPRVRALPRTASAIAVADGVRQRIQVIENKRLPPGT-------IFVLGDNAEVSMDSRVWGELDEGQIVGHPLLKVFPLRSFGLLP*ASRDSRHRRW 1251
            + ++P+YPLV +LER WPV V   E P + T   YN  +A  SL T+   L V +  SQ ++L  IPSRSM+PTL VGDVV+VEKVS       +   D++ F  P  L+++V S+GG +  RDLFVKRVAA P   V+V +DG V ++                       EM L +     +   EE  G                                 +IE + + PGT       +FV+GD + VS+DSRVWG L   +I+G PL +V+P+  FG +P   +      W
Sbjct:   20 YDLKPIYPLVDQLERPWPVTVNEAEIPRLYTVGMYNTVSALGSLFTATFGLGVAYALSQMISLFFIPSRSMDPTLAVGDVVVVEKVSPRIFKSNNHVGDVILFHPPSRLQEIVKSSGGRIGNRDLFVKRVAAEPTQKVTVGSDGKVLID-----------------------EMELQEKR---DMCSEEPLG---------------------------------LIE-RYIEPGTTEVQSDEVFVMGDCSSVSIDSRVWGPLPNKEIIGKPLFRVWPIERFGSIPTLEKTQLQTEW 256          
BLAST of mRNA_H-elongata_contig89249.16426.1 vs. uniprot
Match: A0A7S0Y0G9_HEMAN (Mitochondrial inner membrane protease subunit n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0Y0G9_HEMAN)

HSP 1 Score: 143 bits (361), Expect = 1.800e-35
Identity = 115/354 (32.49%), Postives = 166/354 (46.89%), Query Frame = 1
Query:  163 PRNIRRTVGVGDVVVPIIGARDGWGGIRQGLVRR-------GIFPGVEYRILEVTT-STESGSERVLSSAQEASEDAFDDGDLTFTMRPVYPLVAKLEREWPVRVPAREFPVMLTPFSYNAATAWASLTTSLSLLTVGFVASQALTLSVIPSRSMEPTLQVGDVVLVEKVSRA-AVIRRDDIVFFRAPPALRDVVASAGGTLNTRDLFVKRVAALPGDVVSV-SADGVVEVESARSPPASAAPRTMRSSGKSRVSEMILGDTSSVVEALGEEGRGAMISTVSTSPRVRALPRTASAIAVADGVRQRIQVIENKRLPPGTIFVLGDNAEVSMDSRVWGELDEGQIVGHPLLKVFP 1194
            PR+ R  + VG V VP   A    GG R GL++        G++PG+EYR++ +    T+    RV   A          G++  ++RP+YPL  +LER WPV V + + P  LT   YN+ T   +   S+S++     A +A++   IPS SMEPT+  GD++L EK+S      +R +I+ F  P +L+ VV S GG +  RDLF+KRVAALPGDVV+V +ADG V V   R                                                      + R         G  Q +   +  ++  G  FVLGD   VS+DSRVWG L +  +   PL+K++P
Sbjct:   39 PRDTRGELRVGQVFVPTTLAG---GGSRPGLLQNRDRMFAVGVYPGIEYRLMGMRDIDTKETLFRVPEGA----------GEVEMSVRPIYPLDKRLERPWPVVVSSSDVPCFLTQAMYNSLTLVGTALWSVSVVLFVLFAREAVSFYKIPSASMEPTIHRGDLILAEKLSPLWKTPQRGEILLFTPPDSLKAVVESQGGFVGPRDLFIKRVAALPGDVVTVDTADGSVTVNGER------------------------------------------------------VQRQGPTCDEPSGGAQGLVRPQKGKVKSGVSFVLGDCGPVSVDSRVWGTLSDDDVKARPLVKLWP 325          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig89249.16426.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L442_9PHAE8.810e-13152.28Peptidase_S26 domain-containing protein n=2 Tax=Ec... [more]
A0A0G4EFP7_VITBC1.360e-5038.86Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A835YRZ1_9STRA3.160e-4942.95Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A448ZBV4_9STRA2.690e-4736.99Mitochondrial inner membrane protease subunit n=1 ... [more]
B7G479_PHATC6.210e-4338.46Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A1Z5JWA6_FISSO9.790e-3934.47Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A1Z5KRR1_FISSO1.660e-3834.56Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A7S4KZX7_GUITH1.720e-3835.13Mitochondrial inner membrane protease subunit (Fra... [more]
A0A7S1CZJ0_CYCTE4.160e-3634.68Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A7S0Y0G9_HEMAN1.800e-3532.49Mitochondrial inner membrane protease subunit n=2 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig89249contigH-elongata_contig89249:431..2646 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score341.7
Seed ortholog evalue4.4e-91
Seed eggNOG ortholog2880.D8LKT2
EggNOG free text desc.Peptidase S24-like
EggNOG OGs2CZ78@1,2S8VM@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons3
Model size1339
Cds size1119
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig89249.16426.1prot_H-elongata_contig89249.16426.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig89249 533..2528 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931293.0109358-UTR-H-elongata_contig89249:430..5321622931293.0109358-UTR-H-elongata_contig89249:430..532Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig89249 431..532 +
1691679776.7987375-UTR-H-elongata_contig89249:430..5321691679776.7987375-UTR-H-elongata_contig89249:430..532Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig89249 431..532 +
1622931293.0944238-UTR-H-elongata_contig89249:2528..26461622931293.0944238-UTR-H-elongata_contig89249:2528..2646Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig89249 2529..2646 +
1691679776.834971-UTR-H-elongata_contig89249:2528..26461691679776.834971-UTR-H-elongata_contig89249:2528..2646Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig89249 2529..2646 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931293.027895-CDS-H-elongata_contig89249:532..6791622931293.027895-CDS-H-elongata_contig89249:532..679Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig89249 533..679 +
1691679776.8085845-CDS-H-elongata_contig89249:532..6791691679776.8085845-CDS-H-elongata_contig89249:532..679Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig89249 533..679 +
1622931293.0486248-CDS-H-elongata_contig89249:1090..14591622931293.0486248-CDS-H-elongata_contig89249:1090..1459Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig89249 1091..1459 +
1691679776.8172832-CDS-H-elongata_contig89249:1090..14591691679776.8172832-CDS-H-elongata_contig89249:1090..1459Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig89249 1091..1459 +
1622931293.071367-CDS-H-elongata_contig89249:1925..25281622931293.071367-CDS-H-elongata_contig89249:1925..2528Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig89249 1926..2528 +
1691679776.826208-CDS-H-elongata_contig89249:1925..25281691679776.826208-CDS-H-elongata_contig89249:1925..2528Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig89249 1926..2528 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig89249.16426.1

>prot_H-elongata_contig89249.16426.1 ID=prot_H-elongata_contig89249.16426.1|Name=mRNA_H-elongata_contig89249.16426.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=373bp
MASGSISIEPPSFLKRLFSVPRNIRRTVGVGDVVVPIIGARDGWGGIRQG
LVRRGIFPGVEYRILEVTTSTESGSERVLSSAQEASEDAFDDGDLTFTMR
PVYPLVAKLEREWPVRVPAREFPVMLTPFSYNAATAWASLTTSLSLLTVG
FVASQALTLSVIPSRSMEPTLQVGDVVLVEKVSRAAVIRRDDIVFFRAPP
ALRDVVASAGGTLNTRDLFVKRVAALPGDVVSVSADGVVEVESARSPPAS
AAPRTMRSSGKSRVSEMILGDTSSVVEALGEEGRGAMISTVSTSPRVRAL
PRTASAIAVADGVRQRIQVIENKRLPPGTIFVLGDNAEVSMDSRVWGELD
EGQIVGHPLLKVFPLRSFGLLP*
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mRNA from alignment at H-elongata_contig89249:431..2646+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig89249.16426.1 ID=mRNA_H-elongata_contig89249.16426.1|Name=mRNA_H-elongata_contig89249.16426.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2216bp|location=Sequence derived from alignment at H-elongata_contig89249:431..2646+ (Himanthalia elongata Himel1 dioecious)
TTATTTTTTTTGTTTTCGCAGCGATCCGAAGGGTCGGCGCTCGGAGACAT CCTCGCGCCGGAGGACACACAGGAAGGCGTATCCTCCGCGGCAAAAAGCG CAATGGCCTCGGGGAGCATTTCGATCGAGCCCCCGAGTTTTCTAAAGAGA CTGTTCTCTGTTCCGAGGAACATTCGCAGGACGGTAGGGGTGGGCGACGT GGTGGTACCCATCATCGGCGCGCGCGACGGATGGGGAGGGATACGCCAGG TGAGCGACCTAAGCTCGCGTGACACCTTGATGCCTTGTTCGGGTGGTACT GCATTTGCACAGTGGCGAATGACAGGAAAATATAGCGACGATCACATTTG GCGTGTTATATCCTGTCGTAAATGAAACGATGGACGTTGCCTTTCAGCAG ATGGCCAGGGGCATCCAGGGGCATCTTGACCTCGTGATAAGAATCATTAA GGTGTTTGCGCATCGTGAATGCCTTCGTCAAGCAGGAAAAGGGTCAATCT CCAGATCGACATGCACGCAACACACACGCGCGCAGAGGCATTCCTGCCTG CATCACCCTCGTATCGCCGTCTGAAATCGAAATCAAATAAACGCGCTCCC ATGATTGTCCAAATCCGATGAACTCGTTATTTCCCTGTTTTGCCCTTCTA TGTTTCGCAGGGTCTTGTGCGCCGAGGCATTTTCCCGGGAGTGGAATACA GGATTCTCGAGGTGACCACATCAACGGAATCGGGGTCCGAGCGCGTCCTC TCGTCGGCGCAAGAGGCGTCGGAGGACGCCTTCGACGACGGCGACTTGAC CTTTACGATGCGCCCCGTTTACCCACTCGTGGCGAAGCTGGAACGGGAGT GGCCCGTCCGAGTGCCCGCCCGCGAGTTCCCGGTAATGCTGACACCGTTC TCCTACAACGCTGCGACGGCGTGGGCGTCACTGACCACAAGCCTCTCGCT GCTGACCGTGGGATTCGTGGCGAGCCAGGCGCTGACGCTCTCGGTTATTC CAAGCCGCAGCATGGAGCCCACGCTTCAGGTGGGAAGAGGAGACATAAAT GACTAGAGGATGTGTCGCCTTTTTTGCCCATCTCGAGACTTCAAACTCGG TGGAGCTAATTTCCGAAATCTCAGAAGAGCTGTTCTCCAGGAGACCCATT GCAGCTCTCGCTCAGCGCCGCCCATGTCGTGGGTTTGGGTTCGCCAAAGG GCGGATATTTCCGCCGTTCTATTATCATGCAGCTGAAGATGAATTCCCCG CCGTTTGCTAACGTAATGGTTATTCGTAATATCGTGCAAATCGCCGCTCC AAAAGGAAAAAAATAATAAGTTATATCTCCTTCCCCCTACCCCCTTCCAA CGAGCGCGCGCGCACACACACGTAAGTTATATTATTGTGCACACCCCCGT CGTTTGTTACTGCCTGATTTCGCCCGCGGTGATGACACTTTGATTTCTAA AAAATGAAACAAACGGTAAACGTCCACATAAAACGTAATAACAAGGTGGG CGATGTGGTTCTCGTCGAGAAAGTGTCGAGGGCCGCCGTCATCCGTCGCG ACGACATCGTGTTCTTTCGGGCCCCGCCAGCGCTGCGAGACGTAGTAGCT TCGGCAGGCGGCACCCTCAACACGCGCGACCTCTTCGTCAAACGCGTGGC GGCCCTACCCGGCGACGTCGTTAGCGTCAGCGCAGACGGAGTCGTCGAGG TGGAAAGCGCGCGGTCGCCCCCCGCGAGCGCGGCGCCGCGGACGATGAGG AGTAGTGGAAAGTCGCGGGTATCGGAAATGATACTGGGAGACACGTCGTC TGTGGTGGAAGCGTTGGGCGAAGAGGGTAGGGGCGCGATGATTTCCACGG TTTCCACCAGCCCCCGAGTTAGGGCCTTGCCGCGAACGGCATCCGCCATC GCCGTTGCCGATGGCGTGCGGCAGCGAATACAAGTAATCGAAAACAAACG CCTGCCGCCGGGCACGATCTTCGTGCTGGGGGACAACGCGGAGGTCTCCA TGGACTCGCGCGTCTGGGGAGAGTTGGACGAGGGACAAATCGTGGGGCAC CCGTTATTGAAGGTCTTCCCCCTGAGATCTTTCGGACTGCTTCCATGAGC GTCAAGGGACTCGCGCCATCGGCGGTGGCTACGCCACTTTTTAAAGTGCT TTGTGACCTTTTTGATAGCCAAAGGTACTGAGGCACTCAGTCGCGCACCA CTCGTTATTAAGTGAC
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Coding sequence (CDS) from alignment at H-elongata_contig89249:431..2646+

>mRNA_H-elongata_contig89249.16426.1 ID=mRNA_H-elongata_contig89249.16426.1|Name=mRNA_H-elongata_contig89249.16426.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2238bp|location=Sequence derived from alignment at H-elongata_contig89249:431..2646+ (Himanthalia elongata Himel1 dioecious)
ATGGCCTCGGGGAGCATTTCGATCGAGCCCCCGAGTTTTCTAAAGAGACT
GTTCTCTGTTCCGAGGAACATTCGCAGGACGGTAGGGGTGGGCGACGTGG
TGGTACCCATCATCGGCGCGCGCGACGGATGGGGAGGGATACGCCAGATG
GCCTCGGGGAGCATTTCGATCGAGCCCCCGAGTTTTCTAAAGAGACTGTT
CTCTGTTCCGAGGAACATTCGCAGGACGGTAGGGGTGGGCGACGTGGTGG
TACCCATCATCGGCGCGCGCGACGGATGGGGAGGGATACGCCAGGGTCTT
GTGCGCCGAGGCATTTTCCCGGGAGTGGAATACAGGATTCTCGAGGTGAC
CACATCAACGGAATCGGGGTCCGAGCGCGTCCTCTCGTCGGCGCAAGAGG
CGTCGGAGGACGCCTTCGACGACGGCGACTTGACCTTTACGATGCGCCCC
GTTTACCCACTCGTGGCGAAGCTGGAACGGGAGTGGCCCGTCCGAGTGCC
CGCCCGCGAGTTCCCGGTAATGCTGACACCGTTCTCCTACAACGCTGCGA
CGGCGTGGGCGTCACTGACCACAAGCCTCTCGCTGCTGACCGTGGGATTC
GTGGCGAGCCAGGCGCTGACGCTCTCGGTTATTCCAAGCCGCAGCATGGA
GCCCACGCTTCAGGGTCTTGTGCGCCGAGGCATTTTCCCGGGAGTGGAAT
ACAGGATTCTCGAGGTGACCACATCAACGGAATCGGGGTCCGAGCGCGTC
CTCTCGTCGGCGCAAGAGGCGTCGGAGGACGCCTTCGACGACGGCGACTT
GACCTTTACGATGCGCCCCGTTTACCCACTCGTGGCGAAGCTGGAACGGG
AGTGGCCCGTCCGAGTGCCCGCCCGCGAGTTCCCGGTAATGCTGACACCG
TTCTCCTACAACGCTGCGACGGCGTGGGCGTCACTGACCACAAGCCTCTC
GCTGCTGACCGTGGGATTCGTGGCGAGCCAGGCGCTGACGCTCTCGGTTA
TTCCAAGCCGCAGCATGGAGCCCACGCTTCAGGTGGGCGATGTGGTTCTC
GTCGAGAAAGTGTCGAGGGCCGCCGTCATCCGTCGCGACGACATCGTGTT
CTTTCGGGCCCCGCCAGCGCTGCGAGACGTAGTAGCTTCGGCAGGCGGCA
CCCTCAACACGCGCGACCTCTTCGTCAAACGCGTGGCGGCCCTACCCGGC
GACGTCGTTAGCGTCAGCGCAGACGGAGTCGTCGAGGTGGAAAGCGCGCG
GTCGCCCCCCGCGAGCGCGGCGCCGCGGACGATGAGGAGTAGTGGAAAGT
CGCGGGTATCGGAAATGATACTGGGAGACACGTCGTCTGTGGTGGAAGCG
TTGGGCGAAGAGGGTAGGGGCGCGATGATTTCCACGGTTTCCACCAGCCC
CCGAGTTAGGGCCTTGCCGCGAACGGCATCCGCCATCGCCGTTGCCGATG
GCGTGCGGCAGCGAATACAAGTAATCGAAAACAAACGCCTGCCGCCGGGC
ACGATCTTCGTGCTGGGGGACAACGCGGAGGTCTCCATGGACTCGCGCGT
CTGGGGAGAGTTGGACGAGGGACAAATCGTGGGGCACCCGTTATTGAAGG
TCTTCCCCCTGAGATCTTTCGGACTGCTTCCATGAGTGGGCGATGTGGTT
CTCGTCGAGAAAGTGTCGAGGGCCGCCGTCATCCGTCGCGACGACATCGT
GTTCTTTCGGGCCCCGCCAGCGCTGCGAGACGTAGTAGCTTCGGCAGGCG
GCACCCTCAACACGCGCGACCTCTTCGTCAAACGCGTGGCGGCCCTACCC
GGCGACGTCGTTAGCGTCAGCGCAGACGGAGTCGTCGAGGTGGAAAGCGC
GCGGTCGCCCCCCGCGAGCGCGGCGCCGCGGACGATGAGGAGTAGTGGAA
AGTCGCGGGTATCGGAAATGATACTGGGAGACACGTCGTCTGTGGTGGAA
GCGTTGGGCGAAGAGGGTAGGGGCGCGATGATTTCCACGGTTTCCACCAG
CCCCCGAGTTAGGGCCTTGCCGCGAACGGCATCCGCCATCGCCGTTGCCG
ATGGCGTGCGGCAGCGAATACAAGTAATCGAAAACAAACGCCTGCCGCCG
GGCACGATCTTCGTGCTGGGGGACAACGCGGAGGTCTCCATGGACTCGCG
CGTCTGGGGAGAGTTGGACGAGGGACAAATCGTGGGGCACCCGTTATTGA
AGGTCTTCCCCCTGAGATCTTTCGGACTGCTTCCATGA
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