prot_H-elongata_contig89171.16420.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig89171.16420.1
Unique Name	prot_H-elongata_contig89171.16420.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	232

Homology

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BLAST of mRNA_H-elongata_contig89171.16420.1 vs. uniprot
Match: A0A6H5JBA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA7_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 2.650e-37
Identity = 93/236 (39.41%), Postives = 132/236 (55.93%), Query Frame = 0

Query:    1 LFIDLSGPFHEMSLGGNIFVMMCIDDFTRFKMVRFLKHKNDATNALRDIINDYFEPEGLK--IGVIRTDGGGKWHG-QFLSFLSKLGIKRESTPQHTPQYSGVVKRALGLLRDKTVS-------LLRGIMEGKSDRLWAEAMVYACDMWNQCTSSSLDIGTSPYELWYGR-RPTFDSIPPFGTVGYLRRSKPGHKLAPRGESCIMLGLPPDCPRDNFRVRDLT-TGQILNRQAVTW 224
            +F+DL G     S+GG  + M+  DDFTR   + FLKHK+DA  A R  +      +G+   + ++R+D GG++ G +F S  ++L IK+E TP ++PQY+GV +R LGL+ +  ++       L   +   K+D+LWAEAM +AC+  N    S+     SPYE+WYG  RP      PF    Y R  +P  KL P+GESC  +G   D PRD  RV  LT  G I   + VTW
Sbjct:  727 VFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASV-RADGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGEPRPARPY--PFLKPAYCRWQRPS-KLLPKGESCFYVGPSRDHPRDCHRV--LTRAGTIQETRDVTW 956

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BLAST of mRNA_H-elongata_contig89171.16420.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 2.670e-37
Identity = 93/236 (39.41%), Postives = 132/236 (55.93%), Query Frame = 0

Query:    1 LFIDLSGPFHEMSLGGNIFVMMCIDDFTRFKMVRFLKHKNDATNALRDIINDYFEPEGLK--IGVIRTDGGGKWHG-QFLSFLSKLGIKRESTPQHTPQYSGVVKRALGLLRDKTVS-------LLRGIMEGKSDRLWAEAMVYACDMWNQCTSSSLDIGTSPYELWYGR-RPTFDSIPPFGTVGYLRRSKPGHKLAPRGESCIMLGLPPDCPRDNFRVRDLT-TGQILNRQAVTW 224
            +F+DL G     S+GG  + M+  DDFTR   + FLKHK+DA  A R  +      +G+   + ++R+D GG++ G +F S  ++L IK+E TP ++PQY+GV +R LGL+ +  ++       L   +   K+D+LWAEAM +AC+  N    S+     SPYE+WYG  RP      PF    Y R  +P  KL P+GESC  +G   D PRD  RV  LT  G I   + VTW
Sbjct:  434 VFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASV-RADGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGEPRPARPY--PFLKPAYCRWQRPS-KLLPKGESCFYVGPSRDHPRDCHRV--LTRAGTIQETRDVTW 663

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BLAST of mRNA_H-elongata_contig89171.16420.1 vs. uniprot
Match: A0A6H5JB16_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB16_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 2.720e-37
Identity = 91/236 (38.56%), Postives = 133/236 (56.36%), Query Frame = 0

Query:    1 LFIDLSGPFHEMSLGGNIFVMMCIDDFTRFKMVRFLKHKNDATNALRDIINDYFEPEGLK--IGVIRTDGGGKWHG-QFLSFLSKLGIKRESTPQHTPQYSGVVKRALGLLRDKTVS-------LLRGIMEGKSDRLWAEAMVYACDMWNQCTSSSLDIGTSPYELWYGR-RPTFDSIPPFGTVGYLRRSKPGHKLAPRGESCIMLGLPPDCPRDNFRVRDLT-TGQILNRQAVTW 224
            +F+DL G    +S+GG  + M+  DDFTR   + FL++K+DA +A R  +      +G+   +  +R+D GG++ G +F S  ++L IK+E TP H+PQY+GV +R LGL+ +  ++       L   +   K+D+LWAEAM +AC+  N    S+     SPYE+WYG  RP      PF    Y +  +P  KL P+GESC  +G   D PRD  RV  LT  G I   + VTW
Sbjct:  331 VFVDLGGKKAVVSVGGKYYPMIVKDDFTRRAWIYFLRNKSDAASAFRSFLASV-RADGIPSLVETVRSDNGGEFFGGEFASVCNELLIKQEFTPAHSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEALNHTACSANPDSKSPYEMWYGEARPARPY--PFLKPAYCKWQRPS-KLFPKGESCFYVGPSRDHPRDCHRV--LTRAGTIQETRDVTW 560

[Close]

BLAST of mRNA_H-elongata_contig89171.16420.1 vs. uniprot
Match: A0A6H5K622_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K622_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 2.280e-36
Identity = 91/236 (38.56%), Postives = 133/236 (56.36%), Query Frame = 0

Query:    1 LFIDLSGPFHEMSLGGNIFVMMCIDDFTRFKMVRFLKHKNDATNALRDIINDYFEPEGLK--IGVIRTDGGGKWHG-QFLSFLSKLGIKRESTPQHTPQYSGVVKRALGLLRDKTVS-------LLRGIMEGKSDRLWAEAMVYACDMWNQCTSSSLDIGTSPYELWYGR-RPTFDSIPPFGTVGYLRRSKPGHKLAPRGESCIMLGLPPDCPRDNFRVRDLT-TGQILNRQAVTW 224
            +F+DL G     S+GG  + M+  DDFTR   + FL+ K+DA +A R  + +    +G+   I ++R+D GG++ G +F S  ++L IK+E TP H+P+++GV +R LGL+ +  ++       L   +   K+DRLWAEAM +AC+  N    S+     SPYE+WYG  RP      PF    Y +  +P  KL P+GESC  +G   D PRD  RV  LT  G I   + VTW
Sbjct:  478 VFVDLGGKKGVASIGGKHYPMILKDDFTRRAWMYFLRSKSDAGSAFRSFLANV-RADGIPSLIEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAHSPEFNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEALNHTACSANPDSKSPYEMWYGEARPARPY--PFLKPAYCKWQRPS-KLLPKGESCFYVGPSRDHPRDCHRV--LTRAGTIQETRNVTW 707

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BLAST of mRNA_H-elongata_contig89171.16420.1 vs. uniprot
Match: A0A6H5KVR5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR5_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 5.240e-36
Identity = 84/219 (38.36%), Postives = 122/219 (55.71%), Query Frame = 0

Query:    1 LFIDLSGPFHEMSLGGNIFVMMCIDDFTRFKMVRFLKHKNDATNALRDIINDYFEPEGLK--IGVIRTDGGGKWHG-QFLSFLSKLGIKRESTPQHTPQYSGVVKRALGLLRDKTVS-------LLRGIMEGKSDRLWAEAMVYACDMWNQCTSSSLDIGTSPYELWYGR-RPTFDSIPPFGTVGYLRRSKPGHKLAPRGESCIMLGLPPDCPRDNFRV 208
            +F DL G     S+GG  + ++  DDFTR   + FL++K+DA +A R  +       G+   + ++R+D GGK+ G  F S  ++L IK+E TP ++PQY+GV +R LGL+ +  ++       L   +   K+D+LWAEAM +AC+  N    S+     SPYE+WYG  RP      PF    Y R  +P  KL P+GESC  +G   D PRD  RV
Sbjct:   95 VFADLGGRKDIASVGGKHYPIIVKDDFTRHTWMYFLRNKSDAGSAFRTFLASV-RANGVPSFVEIVRSDNGGKFFGGDFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGEPRPARPY--PFSKPAYCRWQRPS-KLLPKGESCFYVGPSRDHPRDCHRV 309

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BLAST of mRNA_H-elongata_contig89171.16420.1 vs. uniprot
Match: A0A6H5J594_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J594_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 1.010e-35
Identity = 92/236 (38.98%), Postives = 131/236 (55.51%), Query Frame = 0

Query:    1 LFIDLSGPFHEMSLGGNIFVMMCIDDFTRFKMVRFLKHKNDATNALRDIINDYFEPEGLK--IGVIRTD-GGGKWHGQFLSFLSKLGIKRESTPQHTPQYSGVVKRALGLLRDKTVS-------LLRGIMEGKSDRLWAEAMVYACDMWNQCTSSSLDIGTSPYELWYGR-RPTFDSIPPFGTVGYLRRSKPGHKLAPRGESCIMLGLPPDCPRDNFRVRDLT-TGQILNRQAVTW 224
            +F+DL G     S+GG  + M+  DDFTR   + FL+ K+DA +A R   +     +G+   I ++R+D GGG + G+F S  ++L IK+E TP H+P+++GV +R LGL  +  ++       L   +   K+DRLWAEAM +AC+  N    S+     SPYE+WYG  RP      PF    Y +  +P  KL P+GESC  +G   D PRD  RV  LT  G I   + VTW
Sbjct:  128 VFVDLGGKKGVASIGGKHYPMILKDDFTRRAWMYFLRSKSDAGSAFRSF-HANVRADGIPSLIEIVRSDNGGGFFGGEFASVCNELVIKQEFTPAHSPEFNGVAERGLGLTEEAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEALNHTACSANPDSKSPYEMWYGEARPARPY--PFLKPAYCKWQRPS-KLLPKGESCFYVGPSRDHPRDCHRV--LTRAGTIQETRNVTW 357

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BLAST of mRNA_H-elongata_contig89171.16420.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 1.060e-35
Identity = 91/236 (38.56%), Postives = 132/236 (55.93%), Query Frame = 0

Query:    1 LFIDLSGPFHEMSLGGNIFVMMCIDDFTRFKMVRFLKHKNDATNALRDIINDYFEPEGLK--IGVIRTDGGGKWHG-QFLSFLSKLGIKRESTPQHTPQYSGVVKRALGLLRDKTVS-------LLRGIMEGKSDRLWAEAMVYACDMWNQCTSSSLDIGTSPYELWYGR-RPTFDSIPPFGTVGYLRRSKPGHKLAPRGESCIMLGLPPDCPRDNFRVRDLT-TGQILNRQAVTW 224
            +F+DL G     S+GG  + M+  DDFTR   + FL++K+DA +A R  +       G+   + ++R+D GG++ G +F S  ++L IK+E TP ++PQY+GV +R LGL+ +  ++       L   +   K+D+LWAEAM +AC+  N    S+     SPYE+WYG  RP      PF    Y R  +P  KL P+GESC  +G   D PRD  RV  LT  G I   + VTW
Sbjct:  248 VFVDLGGRKDIASVGGKHYPMIVKDDFTRRTWICFLRNKSDAGSAFRTFLASV-RANGVPSFVEIVRSDNGGEFFGGEFTSVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGEPRPARPY--PFLKPAYCRWQRPT-KLLPKGESCFYVGPSRDHPRDCHRV--LTRAGTIQETRDVTW 477

[Close]

BLAST of mRNA_H-elongata_contig89171.16420.1 vs. uniprot
Match: A0A6H5JH25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH25_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 1.080e-35
Identity = 90/236 (38.14%), Postives = 133/236 (56.36%), Query Frame = 0

Query:    1 LFIDLSGPFHEMSLGGNIFVMMCIDDFTRFKMVRFLKHKNDATNALRDIINDYFEPEGLK--IGVIRTDGGGKWHG-QFLSFLSKLGIKRESTPQHTPQYSGVVKRALGLLRDKTVS-------LLRGIMEGKSDRLWAEAMVYACDMWNQCTSSSLDIGTSPYELWYGR-RPTFDSIPPFGTVGYLRRSKPGHKLAPRGESCIMLGLPPDCPRDNFRVRDLT-TGQILNRQAVTW 224
            +F++L G     S+GG  + M+  DDFTR   + FL+ K+DA +A R  + +    +G+   I ++R+D GG++ G +F S  ++L IK+E TP H+P+++GV +R LGL+ +  ++       L   +   K+DRLWAEAM +AC+  N    S+     SPYE+WYG  RP      PF    Y +  +P  KL P+GESC  +G   D PRD  RV  LT  G I   + VTW
Sbjct:  454 VFVNLGGKKGVASIGGKHYPMILKDDFTRRAWMYFLRSKSDAGSAFRSFLANV-RADGIPSLIEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAHSPEFNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEALNHTACSANPDSKSPYEMWYGEARPARPY--PFLKPAYCKWQRPS-KLLPKGESCFYVGPSRDHPRDCHRV--LTRAGTIQETRNVTW 683

[Close]

BLAST of mRNA_H-elongata_contig89171.16420.1 vs. uniprot
Match: A0A6H5L3Y0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Y0_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 2.480e-35
Identity = 90/236 (38.14%), Postives = 131/236 (55.51%), Query Frame = 0

Query:    1 LFIDLSGPFHEMSLGGNIFVMMCIDDFTRFKMVRFLKHKNDATNALRDIINDYFEPEGLK--IGVIRTDGGGKWHG-QFLSFLSKLGIKRESTPQHTPQYSGVVKRALGLLRDKTVS-------LLRGIMEGKSDRLWAEAMVYACDMWNQCTSSSLDIGTSPYELWYGR-RPTFDSIPPFGTVGYLRRSKPGHKLAPRGESCIMLGLPPDCPRDNFRVRDLT-TGQILNRQAVTW 224
            +F+DL G     S+GG  + M+  DDFTR   + FL++K+DA +A R  +       G+   + ++R+D GG++ G +F S  ++L IK+E TP ++PQY+GV +R LGL+ +  ++       L   +   K+D+LWAEAM +AC+  N    S+      PYE+WYG  RP      PF    Y R  +P  KL P+GESC  +G   D PRD  RV  LT  G I   + VTW
Sbjct:  193 VFVDLGGRKDSASVGGKHYPMIVKDDFTRRTWMYFLRNKSDAGSAFRTFLASV-RANGVPSFVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMPPYEMWYGEPRPARPY--PFLKPAYCRWQRPT-KLLPKGESCFYVGPSRDHPRDCHRV--LTRAGTIQETRDVTW 422

[Close]

BLAST of mRNA_H-elongata_contig89171.16420.1 vs. uniprot
Match: A0A6H5K2M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M6_9PHAE)

HSP 1 Score: 142 bits (358), Expect = 3.380e-35
Identity = 89/235 (37.87%), Postives = 129/235 (54.89%), Query Frame = 0

Query:    1 LFIDLSGPFHEMSLGGNIFVMMCIDDFTRFKMVRFLKHKNDATNALRDIINDYFEPEGLK--IGVIRTDGGGKWHG-QFLSFLSKLGIKRESTPQHTPQYSGVVKRALGLLRDKTVS-------LLRGIMEGKSDRLWAEAMVYACDMWNQCTSSSLDIGTSPYELWYGRRPTFDSIPPFGTVGYLRRSKPGHKLAPRGESCIMLGLPPDCPRDNFRVRDLT-TGQILNRQAVTW 224
            +F+DL G     S+GG  + M+  DDFTR   + FLK K+DA +A R  +      +G+   + ++R+D GG++ G +F S  ++L IK+E TP ++PQY+GV +R LGL+    ++       L   +   K+DRLWAEAM +AC+  N    S+     SPYE+W+G        P F    Y R  +P  KL P+GE+C  +G   D PRD  RV  LT  G I   + VTW
Sbjct:  633 VFVDLGGRKDVASVGGKHYPMIVKDDFTRRTWMYFLKSKSDAASAFRSFLASV-RADGIPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEAAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEAINHTACSANPDSKSPYEMWHGEASHARPYP-FLKPAYCRWQRPS-KLLPKGEACFYVGPSRDHPRDCHRV--LTRVGTIQETRNVTW 862

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig89171.16420.1 vs. uniprot

BLAST of mRNA_H-elongata_contig89171.16420.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JBA7_9PHAE	2.650e-37	39.41	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KZH7_9PHAE	2.670e-37	39.41	Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JB16_9PHAE	2.720e-37	38.56	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5K622_9PHAE	2.280e-36	38.56	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KVR5_9PHAE	5.240e-36	38.36	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5J594_9PHAE	1.010e-35	38.98	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JRL9_9PHAE	1.060e-35	38.56	Integrase catalytic domain-containing protein n=2 ...	[more]
A0A6H5JH25_9PHAE	1.080e-35	38.14	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L3Y0_9PHAE	2.480e-35	38.14	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5K2M6_9PHAE	3.380e-35	37.87	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 1..172 e-value: 6.4E-21 score: 76.5
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 12..111 e-value: 1.5E-9 score: 38.1
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 1..161 score: 16.624
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 3..164

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig89171	contig	H-elongata_contig89171:646..1341 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig89171.16420.1	mRNA_H-elongata_contig89171.16420.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig89171 646..1341 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig89171.16420.1 ID=prot_H-elongata_contig89171.16420.1|Name=mRNA_H-elongata_contig89171.16420.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=232bp
LFIDLSGPFHEMSLGGNIFVMMCIDDFTRFKMVRFLKHKNDATNALRDII
NDYFEPEGLKIGVIRTDGGGKWHGQFLSFLSKLGIKRESTPQHTPQYSGV
VKRALGLLRDKTVSLLRGIMEGKSDRLWAEAMVYACDMWNQCTSSSLDIG
TSPYELWYGRRPTFDSIPPFGTVGYLRRSKPGHKLAPRGESCIMLGLPPD
CPRDNFRVRDLTTGQILNRQAVTWHPPTGGR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036397	RNaseH_sf
IPR001584	Integrase_cat-core
IPR012337	RNaseH-like_sf