prot_H-elongata_contig88997.16409.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig88997.16409.1 vs. uniprot
Match: A0A151RGT1_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151RGT1_CAJCA) HSP 1 Score: 58.9 bits (141), Expect = 9.320e-9 Identity = 27/64 (42.19%), Postives = 43/64 (67.19%), Query Frame = 0
Query: 2 VLSMIAALGWEARQLDVNMVYMEADVEEEIYVELPEAYR--DSRKKVGLLKKAMYGLVHAGLLW 63
VL++ A GW+ QLDV ++ ++EEE+Y+E+P+ ++ + R KV LLKKA+YGL + W
Sbjct: 87 VLALTAHFGWDLHQLDVKSAFLHGNLEEEVYMEIPQGFKVQNERNKVCLLKKALYGLTQSLRAW 150
BLAST of mRNA_H-elongata_contig88997.16409.1 vs. uniprot
Match: A0A438FD45_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438FD45_VITVI) HSP 1 Score: 58.5 bits (140), Expect = 1.710e-8 Identity = 27/62 (43.55%), Postives = 43/62 (69.35%), Query Frame = 0
Query: 3 LSMIAALGWEARQLDVNMVYMEADVEEEIYVELPEAYRDSRK-KVGLLKKAMYGLVHAGLLW 63
L+++ A WE Q+DVN ++ D+EEE+Y++LPE ++ +RK KV L+K++YGL A W
Sbjct: 150 LAVVVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGFKATRKNKVCKLQKSLYGLKQASRQW 211
BLAST of mRNA_H-elongata_contig88997.16409.1 vs. uniprot
Match: A0A1R3I9P8_COCAP (No apical meristem (NAM) protein n=1 Tax=Corchorus capsularis TaxID=210143 RepID=A0A1R3I9P8_COCAP) HSP 1 Score: 58.5 bits (140), Expect = 1.920e-8 Identity = 27/63 (42.86%), Postives = 40/63 (63.49%), Query Frame = 0
Query: 1 MVLSMIAALGWEARQLDVNMVYMEADVEEEIYVELPEAYRDSRKKVGLLKKAMYGLVHAGLLW 63
++LS+ A GW +QLD+N ++ D+EEE+Y++LPE Y KV L K++YGL A W
Sbjct: 411 LLLSLAAIHGWHLQQLDINNAFLHGDLEEEVYMKLPEGYSAEPNKVCRLIKSLYGLKQASRQW 473
BLAST of mRNA_H-elongata_contig88997.16409.1 vs. uniprot
Match: UPI0016531EF6 (uncharacterized protein LOC118479628 n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI0016531EF6) HSP 1 Score: 57.4 bits (137), Expect = 4.920e-8 Identity = 29/63 (46.03%), Postives = 39/63 (61.90%), Query Frame = 0
Query: 2 VLSMIAALGWEARQLDVNMVYMEADVEEEIYVELPEAYR-DSRKKVGLLKKAMYGLVHAGLLW 63
VLSM+ WE QLD+N ++ D+ EEIY+ LP+ Y S KV LKK++YGL A +W
Sbjct: 1123 VLSMVVHFNWEIYQLDINNAFLYGDLNEEIYMFLPDGYNPSSESKVCKLKKSLYGLKQAPRMW 1185
BLAST of mRNA_H-elongata_contig88997.16409.1 vs. uniprot
Match: A0A438KJS5_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438KJS5_VITVI) HSP 1 Score: 57.0 bits (136), Expect = 6.420e-8 Identity = 27/62 (43.55%), Postives = 42/62 (67.74%), Query Frame = 0
Query: 3 LSMIAALGWEARQLDVNMVYMEADVEEEIYVELPEAYRDSRK-KVGLLKKAMYGLVHAGLLW 63
L++ A WE Q+DVN ++ D+EEE+Y++LPE ++ +RK KV L+K++YGL A W
Sbjct: 8 LAVAVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGFKATRKNKVCKLQKSLYGLKQASRQW 69
BLAST of mRNA_H-elongata_contig88997.16409.1 vs. uniprot
Match: A0A7S1SHQ1_9CHLO (Hypothetical protein (Fragment) n=2 Tax=Eukaryota TaxID=2759 RepID=A0A7S1SHQ1_9CHLO) HSP 1 Score: 55.5 bits (132), Expect = 8.460e-8 Identity = 29/65 (44.62%), Postives = 41/65 (63.08%), Query Frame = 0
Query: 3 LSMIAALGWEARQLDVNMVYMEADVEEEIYVELPEAYR----DSRKKVGLLKKAMYGLVHAGLLW 63
L++ A WE QLDV ++EAD+EEEIY+ PE +R + ++V LLKK++YGL A W
Sbjct: 11 LALAAYNDWEVEQLDVVTAFLEADIEEEIYMRQPEGFRHFDINGEERVCLLKKSLYGLKQAPRNW 75
BLAST of mRNA_H-elongata_contig88997.16409.1 vs. uniprot
Match: A0A7S0MH90_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MH90_9CRYP) HSP 1 Score: 55.8 bits (133), Expect = 1.680e-7 Identity = 25/53 (47.17%), Postives = 34/53 (64.15%), Query Frame = 0
Query: 11 WEARQLDVNMVYMEADVEEEIYVELPEAYRDSRKKVGLLKKAMYGLVHAGLLW 63
W RQ DV+ Y+ A +EEEIYVE P + +S KK+ LLKK++YG + W
Sbjct: 164 WGIRQFDVSTAYLNAPIEEEIYVEPPPGFEESDKKIWLLKKSLYGAKQSAKNW 216
BLAST of mRNA_H-elongata_contig88997.16409.1 vs. uniprot
Match: A0A438E4T4_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=6 Tax=Vitis vinifera TaxID=29760 RepID=A0A438E4T4_VITVI) HSP 1 Score: 55.8 bits (133), Expect = 1.710e-7 Identity = 26/62 (41.94%), Postives = 42/62 (67.74%), Query Frame = 0
Query: 3 LSMIAALGWEARQLDVNMVYMEADVEEEIYVELPEAYRDSRK-KVGLLKKAMYGLVHAGLLW 63
L+++ A WE Q+DVN ++ D+EEE+Y++LPE ++ + K KV L+K++YGL A W
Sbjct: 647 LAVVVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGFKATGKNKVCKLQKSLYGLKQASRQW 708
BLAST of mRNA_H-elongata_contig88997.16409.1 vs. uniprot
Match: W9RQX6_9ROSA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Morus notabilis TaxID=981085 RepID=W9RQX6_9ROSA) HSP 1 Score: 55.5 bits (132), Expect = 2.350e-7 Identity = 25/61 (40.98%), Postives = 38/61 (62.30%), Query Frame = 0
Query: 3 LSMIAALGWEARQLDVNMVYMEADVEEEIYVELPEAYRDSRKKVGLLKKAMYGLVHAGLLW 63
LS+ A L W +QLDV ++ D+EEE+Y+E+P + D +V LKK++YGL + W
Sbjct: 75 LSITANLDWSLQQLDVKNAFLNGDLEEEVYMEMPPGFEDKGDQVCKLKKSLYGLKQSPRAW 135
BLAST of mRNA_H-elongata_contig88997.16409.1 vs. uniprot
Match: A0A438GNV2_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GNV2_VITVI) HSP 1 Score: 54.3 bits (129), Expect = 5.920e-7 Identity = 26/62 (41.94%), Postives = 41/62 (66.13%), Query Frame = 0
Query: 3 LSMIAALGWEARQLDVNMVYMEADVEEEIYVELPEAYRDSRK-KVGLLKKAMYGLVHAGLLW 63
L++ A WE Q+DVN ++ D+EEE+Y++LPE ++ + K KV L+K++YGL A W
Sbjct: 178 LAIAVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGFKATGKNKVCKLQKSLYGLKQASRQW 239 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig88997.16409.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig88997.16409.1 ID=prot_H-elongata_contig88997.16409.1|Name=mRNA_H-elongata_contig88997.16409.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=64bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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