mRNA_H-elongata_contig88918.16400.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig88918.16400.1 vs. uniprot
Match: A0A6H5L4S6_9PHAE (Methyltransf_11 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4S6_9PHAE) HSP 1 Score: 97.4 bits (241), Expect = 2.510e-22 Identity = 44/70 (62.86%), Postives = 57/70 (81.43%), Query Frame = 2
Query: 2 EWLGGFQEGGGVNGSEEKGKVVDSFDTILSLMEENSHFKLEKRLPMPFLIRENAREFQWGCSDGTIWRRQ 211
EWLGGF+EGG + +++G+ VDSFD I S+ME + F LE+R MPFLIRE+AR+FQWGCSDGT+WRR+
Sbjct: 287 EWLGGFREGG--DAGKQEGEYVDSFDRIRSIMEADDAFGLERRCSMPFLIREHARKFQWGCSDGTVWRRK 354
BLAST of mRNA_H-elongata_contig88918.16400.1 vs. uniprot
Match: A0A2D4BLZ6_PYTIN (Methyltransf_11 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BLZ6_PYTIN) HSP 1 Score: 63.2 bits (152), Expect = 6.150e-10 Identity = 31/70 (44.29%), Postives = 44/70 (62.86%), Query Frame = 2
Query: 2 EWLGGFQEGGGVNGSEEKGKVVDSFDTILSLMEENSHFKLEKRLPMPFLIRENAREFQWGCSDGTIWRRQ 211
+W+GG + + G+ V SFD + L+E HF+L KR F+IRE+AR++QWG SDGT WRR+
Sbjct: 216 KWIGGVVD--------KDGQPVQSFDVVAKLLE--PHFELVKREDYLFMIREHARKYQWGVSDGTFWRRK 275
BLAST of mRNA_H-elongata_contig88918.16400.1 vs. uniprot
Match: A0A835WP74_9CHLO (Methyltransf_11 domain-containing protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A835WP74_9CHLO) HSP 1 Score: 60.5 bits (145), Expect = 6.990e-9 Identity = 30/74 (40.54%), Postives = 46/74 (62.16%), Query Frame = 2
Query: 2 EWLGGFQEGGGVNGSEEKGKVVDSFDTILSLMEENSHFKLEKRLPMPFLIRENAREFQWGCSDGTIWRRQ*PTA 223
+WLGG+ + GK V ++DTI + + + F+L +PFLIRE+AR+FQWGCS+ +W+R+ TA
Sbjct: 246 KWLGGYYK---------DGKPVRTYDTICAAL--SPDFELVASSDVPFLIREHARKFQWGCSNALVWKRKGRTA 308
BLAST of mRNA_H-elongata_contig88918.16400.1 vs. uniprot
Match: A0A836C2Q9_9CHLO (Methyltransf_11 domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C2Q9_9CHLO) HSP 1 Score: 60.5 bits (145), Expect = 7.040e-9 Identity = 30/70 (42.86%), Postives = 43/70 (61.43%), Query Frame = 2
Query: 2 EWLGGFQEGGGVNGSEEKGKVVDSFDTILSLMEENSHFKLEKRLPMPFLIRENAREFQWGCSDGTIWRRQ 211
+WLGG+ + GK V + DT+L+L+ + F L +PFLIRE+AR+FQWGCS +WRR+
Sbjct: 248 KWLGGYYK---------DGKPVRTHDTLLALL--SPDFDLVASEDVPFLIREHARKFQWGCSQALVWRRK 306
BLAST of mRNA_H-elongata_contig88918.16400.1 vs. uniprot
Match: A0A5D6XU92_9STRA (Methyltransf_11 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XU92_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 1.110e-8 Identity = 27/53 (50.94%), Postives = 37/53 (69.81%), Query Frame = 2
Query: 53 KGKVVDSFDTILSLMEENSHFKLEKRLPMPFLIRENAREFQWGCSDGTIWRRQ 211
+G VDSF + + E HF+L KR PF+IRE+AR+FQ+G SDGT W+R+
Sbjct: 221 QGAPVDSFSVVEKYLSE--HFELVKRQDYPFMIREHARKFQYGVSDGTFWKRK 271
BLAST of mRNA_H-elongata_contig88918.16400.1 vs. uniprot
Match: K3X4G4_GLOUD (Methyltransf_11 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X4G4_GLOUD) HSP 1 Score: 57.8 bits (138), Expect = 5.730e-8 Identity = 28/60 (46.67%), Postives = 38/60 (63.33%), Query Frame = 2
Query: 32 GVNGSEEKGKVVDSFDTILSLMEENSHFKLEKRLPMPFLIRENAREFQWGCSDGTIWRRQ 211
G E G+ VDSF I + ++ F L KR PF+IRE+AR++QWG SDGT W+R+
Sbjct: 218 GARVDEATGQPVDSFSVIEKHLSKD--FTLVKRQDYPFMIREHARKYQWGVSDGTFWQRK 275
BLAST of mRNA_H-elongata_contig88918.16400.1 vs. uniprot
Match: A0A250XJL9_9CHLO (Methyltransf_11 domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XJL9_9CHLO) HSP 1 Score: 56.2 bits (134), Expect = 2.270e-7 Identity = 27/70 (38.57%), Postives = 43/70 (61.43%), Query Frame = 2
Query: 2 EWLGGFQEGGGVNGSEEKGKVVDSFDTILSLMEENSHFKLEKRLPMPFLIRENAREFQWGCSDGTIWRRQ 211
+W+GG+ + GK V + ++ ++ ++ F L R MPFLIRE+AR+FQWGCS+ +WRR+
Sbjct: 240 KWIGGYNK---------DGKPVYTASSMTEILSKD--FDLIAREDMPFLIREHARKFQWGCSNAMVWRRK 298
BLAST of mRNA_H-elongata_contig88918.16400.1 vs. uniprot
Match: A0A2J8ABM2_9CHLO (Methyltransf_11 domain-containing protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8ABM2_9CHLO) HSP 1 Score: 53.9 bits (128), Expect = 1.540e-6 Identity = 26/70 (37.14%), Postives = 40/70 (57.14%), Query Frame = 2
Query: 2 EWLGGFQEGGGVNGSEEKGKVVDSFDTILSLMEENSHFKLEKRLPMPFLIRENAREFQWGCSDGTIWRRQ 211
+WLGG+ + G+ V + DTI +++ + F L PFLIRE+AR+FQWGCS +W+ +
Sbjct: 244 KWLGGYYK---------DGQAVRTADTIAAVL--SPDFDLVAEQDCPFLIREHARKFQWGCSHAVVWKHK 302
BLAST of mRNA_H-elongata_contig88918.16400.1 vs. uniprot
Match: A0A8J4FDP1_9CHLO (Methyltransf_12 domain-containing protein n=3 Tax=Volvox TaxID=3066 RepID=A0A8J4FDP1_9CHLO) HSP 1 Score: 52.4 bits (124), Expect = 5.500e-6 Identity = 25/70 (35.71%), Postives = 41/70 (58.57%), Query Frame = 2
Query: 2 EWLGGFQEGGGVNGSEEKGKVVDSFDTILSLMEENSHFKLEKRLPMPFLIRENAREFQWGCSDGTIWRRQ 211
+WLGG+ + GK V + + + ++ + F L + +PFLIRE+AR+FQWGCS +W+R+
Sbjct: 248 KWLGGYYK---------DGKPVRTAEMVTCVL--SPDFDLVAQEDVPFLIREHARKFQWGCSQAMVWKRK 306
BLAST of mRNA_H-elongata_contig88918.16400.1 vs. uniprot
Match: A0A7S0UWG5_9CHLO (Hypothetical protein n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0UWG5_9CHLO) HSP 1 Score: 49.7 bits (117), Expect = 5.100e-5 Identity = 18/31 (58.06%), Postives = 27/31 (87.10%), Query Frame = 2
Query: 119 LEKRLPMPFLIRENAREFQWGCSDGTIWRRQ 211
+E + MPFLIRE+AR+FQWGCS+G +++R+
Sbjct: 302 IESGVEMPFLIREHARKFQWGCSEGMVFKRR 332 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig88918.16400.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig88918.16400.1 >prot_H-elongata_contig88918.16400.1 ID=prot_H-elongata_contig88918.16400.1|Name=mRNA_H-elongata_contig88918.16400.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=40bp MEENSHFKLEKRLPMPFLIRENAREFQWGCSDGTIWRRQ*back to top mRNA from alignment at H-elongata_contig88918:1644..2112- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig88918.16400.1 ID=mRNA_H-elongata_contig88918.16400.1|Name=mRNA_H-elongata_contig88918.16400.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=469bp|location=Sequence derived from alignment at H-elongata_contig88918:1644..2112- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig88918:1644..2112- >mRNA_H-elongata_contig88918.16400.1 ID=mRNA_H-elongata_contig88918.16400.1|Name=mRNA_H-elongata_contig88918.16400.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=240bp|location=Sequence derived from alignment at H-elongata_contig88918:1644..2112- (Himanthalia elongata Himel1 dioecious)back to top |