prot_H-elongata_contig88808.16392.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig88808.16392.1
Unique Nameprot_H-elongata_contig88808.16392.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length136
Homology
BLAST of mRNA_H-elongata_contig88808.16392.1 vs. uniprot
Match: A0A6H5KE64_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KE64_9PHAE)

HSP 1 Score: 194 bits (494), Expect = 3.080e-59
Identity = 106/129 (82.17%), Postives = 116/129 (89.92%), Query Frame = 0
Query:    1 MERQKEEANRLTTSWYDRAQLALQSGDEGLAREALARRQQQLDVSASLEQQMTVQGGALDKLRESMQQLEAKINEAKGQKDTLIARARTAKTTTQVNDMLGNITGTTSMDAFDRMQEKVELLEANAEVS 129
            MERQK+EA+RL  +WYDRAQLALQ+GDE LAREALARRQQQLD S S+  QM  QG ALDKLR+SMQQLEAKI EAKGQK+TLIARARTAKTTTQVNDMLG+ITGTTSMDAFDRM EKVE LEANAE++
Sbjct:  133 MERQKQEADRLAANWYDRAQLALQNGDENLAREALARRQQQLDTSGSMGMQMDAQGQALDKLRDSMQQLEAKITEAKGQKETLIARARTAKTTTQVNDMLGSITGTTSMDAFDRMTEKVESLEANAEIA 261          
BLAST of mRNA_H-elongata_contig88808.16392.1 vs. uniprot
Match: W7TN53_9STRA (Membrane-associated 30 kDa protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TN53_9STRA)

HSP 1 Score: 164 bits (415), Expect = 1.550e-47
Identity = 87/129 (67.44%), Postives = 112/129 (86.82%), Query Frame = 0
Query:    1 MERQKEEANRLTTSWYDRAQLALQSGDEGLAREALARRQQQLDVSASLEQQMTVQGGALDKLRESMQQLEAKINEAKGQKDTLIARARTAKTTTQVNDMLGNITGTTSMDAFDRMQEKVELLEANAEVS 129
            MERQKE+A  L++ WY RAQLAL  GDE LAREAL+RRQQQ++V +SL +QMT+Q GA+D+L  SMQQLEAKI+EAK +KD +IARARTAKT+ +VNDML +++GT+SMDAF+RM+EKVE+LE+ AEV+
Sbjct:  114 MERQKEQAENLSSEWYKRAQLALSKGDEELAREALSRRQQQVEVVSSLGEQMTIQAGAIDRLFNSMQQLEAKISEAKSKKDQMIARARTAKTSEKVNDMLSSVSGTSSMDAFERMKEKVEMLESKAEVA 242          
BLAST of mRNA_H-elongata_contig88808.16392.1 vs. uniprot
Match: A0A836CIH9_9STRA (PspA/IM30 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIH9_9STRA)

HSP 1 Score: 160 bits (404), Expect = 5.660e-46
Identity = 87/129 (67.44%), Postives = 104/129 (80.62%), Query Frame = 0
Query:    1 MERQKEEANRLTTSWYDRAQLALQSGDEGLAREALARRQQQLDVSASLEQQMTVQGGALDKLRESMQQLEAKINEAKGQKDTLIARARTAKTTTQVNDMLGNITGTTSMDAFDRMQEKVELLEANAEVS 129
            MERQ+ EANR+   WY RAQLAL+ GDEGLAREALARRQ Q+D+ A++  QM  Q  ALD+LR  MQ LEAKI EAKG+KD LIARAR+AKTT  VNDML N+TG++ M+AF+RMQ+KVE LE+ AEVS
Sbjct:  110 MERQRAEANRIAEEWYKRAQLALEKGDEGLAREALARRQTQVDIVATVGAQMDTQQQALDQLRSGMQALEAKITEAKGKKDALIARARSAKTTQNVNDMLNNVTGSSGMEAFERMQQKVEALESTAEVS 238          
BLAST of mRNA_H-elongata_contig88808.16392.1 vs. uniprot
Match: A0A7S1D0V6_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D0V6_CYCTE)

HSP 1 Score: 156 bits (395), Expect = 1.850e-44
Identity = 85/127 (66.93%), Postives = 103/127 (81.10%), Query Frame = 0
Query:    3 RQKEEANRLTTSWYDRAQLALQSGDEGLAREALARRQQQLDVSASLEQQMTVQGGALDKLRESMQQLEAKINEAKGQKDTLIARARTAKTTTQVNDMLGNITGTTSMDAFDRMQEKVELLEANAEVS 129
            +QKE+A+ L   WY RAQLAL+ G+E LAREAL+RRQQQLD SA+L+QQ+  QG ++DKL E MQ LE KI E+K +KD +IARARTAK+T QVNDMLG ITG TSMDAF RM++KVE LEA AE+S
Sbjct:  116 KQKEQADSLAQDWYQRAQLALEKGNEDLAREALSRRQQQLDASANLQQQIDTQGASIDKLYEGMQALETKIIESKAKKDQMIARARTAKSTQQVNDMLGGITGKTSMDAFSRMEDKVEALEAAAEIS 242          
BLAST of mRNA_H-elongata_contig88808.16392.1 vs. uniprot
Match: A0A8J2SJN9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJN9_9STRA)

HSP 1 Score: 150 bits (379), Expect = 2.360e-42
Identity = 79/128 (61.72%), Postives = 105/128 (82.03%), Query Frame = 0
Query:    2 ERQKEEANRLTTSWYDRAQLALQSGDEGLAREALARRQQQLDVSASLEQQMTVQGGALDKLRESMQQLEAKINEAKGQKDTLIARARTAKTTTQVNDMLGNITGTTSMDAFDRMQEKVELLEANAEVS 129
            +RQK++A++L   WY RAQLAL+ GD+ LAREAL+R+QQQ+D S SL++Q+ +Q  +L KL +SM  LE+KI+EA+  KD  IARARTAKT T+VNDML +++GTTSMDAF+RM+EKVE+LE  AEVS
Sbjct:   96 QRQKDQADQLADEWYRRAQLALEKGDDELAREALSRKQQQVDASTSLDEQIAIQSDSLSKLYDSMTALESKISEARSMKDQYIARARTAKTATKVNDMLSSVSGTTSMDAFERMKEKVEMLETQAEVS 223          
BLAST of mRNA_H-elongata_contig88808.16392.1 vs. uniprot
Match: A0A7R9VSU0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VSU0_9STRA)

HSP 1 Score: 149 bits (375), Expect = 4.000e-42
Identity = 79/127 (62.20%), Postives = 102/127 (80.31%), Query Frame = 0
Query:    3 RQKEEANRLTTSWYDRAQLALQSGDEGLAREALARRQQQLDVSASLEQQMTVQGGALDKLRESMQQLEAKINEAKGQKDTLIARARTAKTTTQVNDMLGNITGTTSMDAFDRMQEKVELLEANAEVS 129
            +QKE+A+ L   WY RAQLALQ G+EGLAREAL RRQQQ+D +A ++ Q+  Q  ++DKL E MQ LE+KI E+K +K+ ++ARARTA++T +VNDMLG +TG TSMDAF RM+EKVE LEA+AEVS
Sbjct:  130 KQKEQADALAEDWYTRAQLALQKGNEGLAREALERRQQQVDTAAGIQDQIDAQASSIDKLYEGMQALESKILESKAKKEQMVARARTAQSTQKVNDMLGGVTGKTSMDAFKRMEEKVEALEASAEVS 256          
BLAST of mRNA_H-elongata_contig88808.16392.1 vs. uniprot
Match: F0XY98_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XY98_AURAN)

HSP 1 Score: 147 bits (372), Expect = 1.070e-41
Identity = 80/129 (62.02%), Postives = 104/129 (80.62%), Query Frame = 0
Query:    1 MERQKEEANRLTTSWYDRAQLALQSGDEGLAREALARRQQQLDVSASLEQQMTVQGGALDKLRESMQQLEAKINEAKGQKDTLIARARTAKTTTQVNDMLGNITGTTSMDAFDRMQEKVELLEANAEVS 129
            M+RQK++A++L   WY RAQLAL+ GD+ LAREAL+R+ QQ D SA L++Q+ VQ  +L KL +SM QLE+KI+EAK  KD  IARARTAKT T+VNDML ++ G++SMDAF+RM+EKVE+LE  AEVS
Sbjct:   56 MQRQKDQADQLADEWYKRAQLALEKGDDELAREALSRKTQQTDASAGLDEQIAVQTDSLAKLYDSMTQLESKISEAKSMKDQYIARARTAKTATKVNDMLSDVGGSSSMDAFERMKEKVEMLETQAEVS 184          
BLAST of mRNA_H-elongata_contig88808.16392.1 vs. uniprot
Match: K0SI43_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SI43_THAOC)

HSP 1 Score: 148 bits (374), Expect = 1.780e-41
Identity = 82/127 (64.57%), Postives = 102/127 (80.31%), Query Frame = 0
Query:    3 RQKEEANRLTTSWYDRAQLALQSGDEGLAREALARRQQQLDVSASLEQQMTVQGGALDKLRESMQQLEAKINEAKGQKDTLIARARTAKTTTQVNDMLGNITGTTSMDAFDRMQEKVELLEANAEVS 129
            +QKE+A+ L   WY RAQLALQ G+EGLA+EAL+RRQQQ++ S  L+ Q+ +Q  A+DKL E MQ LEAKI E+K +K+ +IARARTA++T QVNDMLG ITG TSMDAF RM++KVE LEA AEVS
Sbjct:  109 KQKEQADALGEDWYKRAQLALQKGEEGLAKEALSRRQQQMETSEGLQTQIDMQAQAVDKLYEGMQALEAKILESKAKKEQMIARARTAQSTQQVNDMLGGITGKTSMDAFQRMEDKVEALEAAAEVS 235          
BLAST of mRNA_H-elongata_contig88808.16392.1 vs. uniprot
Match: A0A7S3L6Z1_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L6Z1_9STRA)

HSP 1 Score: 147 bits (370), Expect = 9.440e-41
Identity = 83/127 (65.35%), Postives = 98/127 (77.17%), Query Frame = 0
Query:    3 RQKEEANRLTTSWYDRAQLALQSGDEGLAREALARRQQQLDVSASLEQQMTVQGGALDKLRESMQQLEAKINEAKGQKDTLIARARTAKTTTQVNDMLGNITGTTSMDAFDRMQEKVELLEANAEVS 129
            +QKE+A+ +   WY RAQLALQ G E LA+EAL RRQ QLD SASL+ Q+  QG A+DKL E MQ LE +I EAK +KD  +ARARTA++T QVNDML  +TGTTSMDAF RM+EKVE LEA AEVS
Sbjct:  109 KQKEQADAVAEDWYKRAQLALQKGAEDLAKEALTRRQVQLDESASLQNQIDAQGDAIDKLYEGMQALEKQILEAKAKKDQFVARARTAQSTQQVNDMLSGLTGTTSMDAFKRMEEKVEALEAAAEVS 235          
BLAST of mRNA_H-elongata_contig88808.16392.1 vs. uniprot
Match: A0A6V2AWV5_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2AWV5_9STRA)

HSP 1 Score: 146 bits (369), Expect = 1.000e-40
Identity = 83/127 (65.35%), Postives = 100/127 (78.74%), Query Frame = 0
Query:    3 RQKEEANRLTTSWYDRAQLALQSGDEGLAREALARRQQQLDVSASLEQQMTVQGGALDKLRESMQQLEAKINEAKGQKDTLIARARTAKTTTQVNDMLGNITGTTSMDAFDRMQEKVELLEANAEVS 129
            +QKE+A+ L   WY RAQLALQ  +E LAREAL RRQQQ+D++A L+QQ+  Q  A+DKL E MQ LEAKI EAK +KD ++ARARTA++T QVNDML  I+G TSMDAF RM+EKVE LEA AEVS
Sbjct:  110 KQKEQADALAQDWYQRAQLALQKENETLAREALNRRQQQVDIAAGLQQQIDNQAAAVDKLYEGMQALEAKILEAKAKKDQMVARARTAQSTQQVNDMLSGISGKTSMDAFTRMEEKVESLEAAAEVS 236          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig88808.16392.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KE64_9PHAE3.080e-5982.17Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TN53_9STRA1.550e-4767.44Membrane-associated 30 kDa protein n=2 Tax=Monodop... [more]
A0A836CIH9_9STRA5.660e-4667.44PspA/IM30 family-domain-containing protein n=1 Tax... [more]
A0A7S1D0V6_CYCTE1.850e-4466.93Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A8J2SJN9_9STRA2.360e-4261.72Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7R9VSU0_9STRA4.000e-4262.20Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
F0XY98_AURAN1.070e-4162.02Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
K0SI43_THAOC1.780e-4164.57Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S3L6Z1_9STRA9.440e-4165.35Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A6V2AWV5_9STRA1.000e-4065.35Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 59..86
NoneNo IPR availablePANTHERPTHR31088:SF6MEMBRANE-ASSOCIATED PROTEIN VIPP1, CHLOROPLASTICcoord: 1..129
IPR007157PspA/IM30PFAMPF04012PspA_IM30coord: 2..129
e-value: 2.9E-28
score: 99.0
IPR007157PspA/IM30PANTHERPTHR31088FAMILY NOT NAMEDcoord: 1..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig88808contigH-elongata_contig88808:288..2358 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig88808.16392.1mRNA_H-elongata_contig88808.16392.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig88808 267..2358 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig88808.16392.1 ID=prot_H-elongata_contig88808.16392.1|Name=mRNA_H-elongata_contig88808.16392.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=136bp
MERQKEEANRLTTSWYDRAQLALQSGDEGLAREALARRQQQLDVSASLEQ
QMTVQGGALDKLRESMQQLEAKINEAKGQKDTLIARARTAKTTTQVNDML
GNITGTTSMDAFDRMQEKVELLEANAEVSRRGGGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007157PspA_IM30