mRNA_H-elongata_contig888.16391.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig888.16391.1 vs. uniprot
Match: D8LBX9_ECTSI (Similar to dedicator of cytokinesis n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBX9_ECTSI) HSP 1 Score: 446 bits (1146), Expect = 2.020e-136 Identity = 246/343 (71.72%), Postives = 267/343 (77.84%), Query Frame = 1
Query: 712 GRVSETFWFDLNSGNTRRKFAHVFTRESPSGNPDHIATPPIILTGSSTRATGNA------GSGHSSRKRGVAQDKNVTRCRRALFALDPKNADGRLFLILQLSKVLQGEPEKVGYD-GAHGDGMGVIVKGGSSVL--EAYTKGRSKYNADSAAEEAAQRLWRYRQPLAFGVYQVAPEGRVQGGEDIIMSLYRQNDGLSEEGLMRHDCRGRWGHHCGR*PVRVTAAYPYPRTGRS-KGLERIQQRNLAIRVELRLYPTGLESRASVGESLPAIFSHQLGPAFVSECYAQTTYHCRNPQVCDEIKVQLPEHLTSRHRLVFTVFHVHVKRKTGGMFTKSGSIDEQV 1710
G E F FDLNS RRKF++VFTRESP+G PD IATP I +TGSSTRAT A G G SR+RG ++NVT CRRALFALDPKNADGRLFL+LQLSKVLQGEPEKV + G G G G +V + L AY+KGRSK NAD+ EEAAQRLWRYRQPLAFGVYQ APEGR+ G E++ MSLYRQNDGLSEEGLMR R R GH CG+ PV AA+P GRS KGLER QQRNLAIRVELRL P G ESRASVG+SLPAIFSHQLGP VSECYAQTTYH R PQVCDEIKVQLPE L+ RHRLVFTVFHVHVKRKTGGMF KSGS+DEQV
Sbjct: 40 GPKREHFRFDLNSSTVRRKFSYVFTRESPTGAPDDIATPSISVTGSSTRATTGASGSSGGGRGKGSRRRGTTVERNVTGCRRALFALDPKNADGRLFLVLQLSKVLQGEPEKVRDETGGEGGGRGGVVVFCMAWLFWTAYSKGRSKSNADAPEEEAAQRLWRYRQPLAFGVYQAAPEGRLLGVEEVSMSLYRQNDGLSEEGLMRQGWRRRRGHPCGQQPVHHAAAHP---RGRSRKGLERCQQRNLAIRVELRLLPLGKESRASVGDSLPAIFSHQLGPTLVSECYAQTTYHSRTPQVCDEIKVQLPEQLSPRHRLVFTVFHVHVKRKTGGMFAKSGSVDEQV 379
BLAST of mRNA_H-elongata_contig888.16391.1 vs. uniprot
Match: D8LBX8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBX8_ECTSI) HSP 1 Score: 342 bits (877), Expect = 1.950e-112 Identity = 165/197 (83.76%), Postives = 185/197 (93.91%), Query Frame = 1
Query: 145 FPQDKEPTFMFPVNDLEVTISSRGRPFRPPPLARGSATPFIATAYDEFTRDWVSLSIGRLAQRTVPCVTYRAEEPPQYPADDDRVPVKLEDFTVGTDDPEEQAGSKEVRVLHYYQPDYRGLRSSYRRMPDLKLQLLLLDRPAHFMWMEIAAQALTFKVGELEPVFCSLTLYRIMSRLGKKGAEVDVSRSGRVSETFW 735
+P+DKEPTF+FPVNDLEV+I+ RGRPF+PPPLARGSAT F+ATAYDEFTRDWV+LSIGRL+Q++VPCV YR+EEPPQYPADD +VP K E FTVGTDDPEEQ GSKEVRVLHYY+P Y+G RS+YR+ PDLKLQLLLLDRPAHFMWMEIAAQALTFKVG LEPVFCSLTLYRI+SRLGKKGAE+D+SRSGRVSETFW
Sbjct: 4 YPKDKEPTFIFPVNDLEVSIAPRGRPFQPPPLARGSATTFLATAYDEFTRDWVNLSIGRLSQKSVPCVKYRSEEPPQYPADDHQVPDK-EKFTVGTDDPEEQPGSKEVRVLHYYRPQYKGPRSTYRKTPDLKLQLLLLDRPAHFMWMEIAAQALTFKVGALEPVFCSLTLYRIVSRLGKKGAEMDLSRSGRVSETFW 199
BLAST of mRNA_H-elongata_contig888.16391.1 vs. uniprot
Match: A0A836CP33_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP33_9STRA) HSP 1 Score: 152 bits (383), Expect = 1.920e-39 Identity = 85/192 (44.27%), Postives = 112/192 (58.33%), Query Frame = 1
Query: 169 FMFPVNDLEVTISSRGRPFRPPPLARGSATPFIATAYDEFTRDWVSLSIGRLAQRTVPCVTYRAEEPPQYPAD----DDRVPVKLEDFTVGTDDPEEQAGSKEVRVLHYYQPDYRGLRSSYRRMPDLKLQLLLLDRPAHFMWMEIAAQALTFKVGELEPVFCSLTLYRIMSRLGKKGAEVDVSRSGRVSETF 732
F FP NDLE+ +S R R P L+ TP + TA DEFTRD+ ++ +GR + VP V PP+YP D + E+ GTD + + EVR+L Y P Y G S+YR++P L+ LL DRP+HF W+++ L F VGE EP+FCSLT+YRI + KKG E+D SGRVSETF
Sbjct: 1 FTFPENDLEIEVSPRARSIGIPALSEAECTPQLVTALDEFTRDFRTVVVGRYSDALVPRVARTLLPPPRYPIDAVTGNGEAVGDEEEVPEGTD-----SDTPEVRLLQQYCPTYSGTPSTYRKLPPHDLRALLGDRPSHFTWLKVDCNKLVFGVGEPEPLFCSLTMYRIEGKPTKKGFELDRRNSGRVSETF 187
BLAST of mRNA_H-elongata_contig888.16391.1 vs. uniprot
Match: A0A1S8XBE9_9TREM (C2 DOCK-type domain-containing protein (Fragment) n=1 Tax=Opisthorchis viverrini TaxID=6198 RepID=A0A1S8XBE9_9TREM) HSP 1 Score: 77.0 bits (188), Expect = 5.260e-11 Identity = 40/102 (39.22%), Postives = 55/102 (53.92%), Query Frame = 1
Query: 1360 YPYPRTGRSKGLERIQQRNLAIRVELRLYPTGLESRASVGESLPAIFSHQLGPAFVSECYAQTTYHCRNPQVCDEIKVQLPEHLTSRHRLVFTVFHVHVKRK 1665
Y YP++ RN++IR++L + + SV + LPAI+ P FV E + YH R P + DEIK+QLPEHL H L+FT FHV + K
Sbjct: 578 YVYPKSVALSPSRESSARNISIRIQL------VHTEDSVAKILPAIYGKSNSPTFVCEAFTPVLYHNRTPDIYDEIKIQLPEHLDENHYLLFTFFHVSCQSK 673
BLAST of mRNA_H-elongata_contig888.16391.1 vs. uniprot
Match: G7Y6S7_CLOSI (Dedicator of cytokinesis protein 7 n=1 Tax=Clonorchis sinensis TaxID=79923 RepID=G7Y6S7_CLOSI) HSP 1 Score: 75.9 bits (185), Expect = 1.210e-10 Identity = 38/102 (37.25%), Postives = 55/102 (53.92%), Query Frame = 1
Query: 1360 YPYPRTGRSKGLERIQQRNLAIRVELRLYPTGLESRASVGESLPAIFSHQLGPAFVSECYAQTTYHCRNPQVCDEIKVQLPEHLTSRHRLVFTVFHVHVKRK 1665
Y YP++ RN+++R++L + + SV + +PAI+ P FV E + YH R P + DEIK+QLPEHL H L+FT FHV + K
Sbjct: 545 YVYPKSVALSPSRESSARNISVRIQL------VHTEGSVAKIIPAIYGKSNSPTFVCEAFTPVLYHIRTPDMYDEIKLQLPEHLDENHYLLFTFFHVSCQSK 640
BLAST of mRNA_H-elongata_contig888.16391.1 vs. uniprot
Match: A0A419PQ28_CLOSI (Dedicator of cytokinesis protein 6 n=2 Tax=Opisthorchiidae TaxID=6196 RepID=A0A419PQ28_CLOSI) HSP 1 Score: 75.9 bits (185), Expect = 1.590e-10 Identity = 38/102 (37.25%), Postives = 55/102 (53.92%), Query Frame = 1
Query: 1360 YPYPRTGRSKGLERIQQRNLAIRVELRLYPTGLESRASVGESLPAIFSHQLGPAFVSECYAQTTYHCRNPQVCDEIKVQLPEHLTSRHRLVFTVFHVHVKRK 1665
Y YP++ RN+++R++L + + SV + +PAI+ P FV E + YH R P + DEIK+QLPEHL H L+FT FHV + K
Sbjct: 619 YVYPKSVALSPSRESSARNISVRIQL------VHTEGSVAKIIPAIYGKSNSPTFVCEAFTPVLYHIRTPDMYDEIKLQLPEHLDENHYLLFTFFHVSCQSK 714
BLAST of mRNA_H-elongata_contig888.16391.1 vs. uniprot
Match: UPI000C7F5DAF (dedicator of cytokinesis protein 7 n=1 Tax=Otolemur garnettii TaxID=30611 RepID=UPI000C7F5DAF) HSP 1 Score: 70.5 bits (171), Expect = 7.270e-9 Identity = 98/413 (23.73%), Postives = 152/413 (36.80%), Query Frame = 1
Query: 559 DRPAHFMWMEIAAQALTFKVG-ELEPVFCSLTLYRIMSRLGKKGAEVDVSRSGRVSETFWFDLNSGNTRRKFAHVFTRESPSGNPDHIATPPIILTGSSTRATGNAGSGHSSRKRGVAQDKNVTRCRRALFALDPKNADGRLFLILQLSKVLQGEPEKVGYDGAHGDGMGVIVKGGSSVLEA-YTKGRSKYNA-DSAAEEAAQRLWRYRQPLAFGVYQ----VAPEGRVQ----------GGEDIIMSLYRQNDGLSEEGLM--RHDCRG--RWGHHCGR*PVRVTAAYPYPRTGRSKGLERIQQR-----NLAIRVELRLYPTGLESRASVGES------------------LPAIFSHQLGPAFVSECYAQTTYHCRNPQVCDEIKVQLPEHLTSRHRLVFTVFHVHVKRK 1665
D P + + L+ K E+EP+F SL LY DV ++SE F+FDLNS + H+ PP +T T R A+F++ + D +FL+++L KVLQ GD +G + EA +K + K S A++ QRL +YR P A+ V+ G ++ GG+ ++ ++ S+ ++ + D H+C + YP R ++ + R N R L +YP L G + +P IF F E Y YH R+P +EIKV+LP LT H L+FT +HV ++K
Sbjct: 147 DAPKEHFGQRLLVKCLSLKFEIEIEPIFASLALY-------------DVKEKKKISENFYFDLNSEQMKGLLR------------PHV--PPAAIT---------------------------TLARSAIFSITYPSQD--VFLVIKLEKVLQ-----------QGD-IGECAEPYMIFKEADASKNKEKLEKLKSQADQFCQRLGKYRMPFAWTAIHLMNIVSSAGSLERDSTEVEISTGGKSVLYKMFLNFSFFSDRLVLFLKIDISPAPENPHYCLTPELLQVKLYPDSRVRPTREILEFPARDVYVPNTTYRNLLYIYPQSLNFANRQGSARNITVKVQFMYGEDPSNAMPVIFGKSSCSEFSKEAYTAVVYHNRSPDFHEEIKVKLPATLTDHHHLLFTFYHVSCQQK 491
BLAST of mRNA_H-elongata_contig888.16391.1 vs. uniprot
Match: A0A8D0UKU7_PIG (Uncharacterized protein n=1 Tax=Sus scrofa TaxID=9823 RepID=A0A8D0UKU7_PIG) HSP 1 Score: 70.1 bits (170), Expect = 9.610e-9 Identity = 105/438 (23.97%), Postives = 157/438 (35.84%), Query Frame = 1
Query: 559 DRPAHFMWMEIAAQALTFKVG-ELEPVFCSLTLYRIMSRLGKKGAEVDVSRSGRVSETFWFDLNSGNTRRKFAHVFTRESPSGNPDHIATPPIILTGSSTRATGNAGSGHSSRKRGVAQDKNVTRCRRALFALDPKNADGRLFLILQLSKVLQGEPEKVGYDGAHGDGMGVIVKGGSSVLEA-YTKGRSKYNA-DSAAEEAAQRLWRYRQPLAFGVYQ----VAPEGRVQ----------GGEDII----MSLYRQNDGLSEEGLMRH--DCRGRWG-----------------------HHCGR*PVRVTAAYPYPRTGRSKGLERIQQR-----NLAIRVELRLYPTGLESRASVGES------------------LPAIFSHQLGPAFVSECYAQTTYHCRNPQVCDEIKVQLPEHLTSRHRLVFTVFHVHVKRK 1665
D P + + L+ K E+EP+F SL LY DV ++SE F+FDLNS + H+ PP +T T R A+F++ + D +FL+++L KVLQ GD +G + EA TK + K S A++ QRL +YR P A+ V+ G ++ GG+ + ++L+ + D LS+E L + D R H+C + YP R ++ + R N R L +YP L G + +P IF F E Y YH R+P +EIKV+LP LT H L+FT +HV ++K
Sbjct: 147 DVPKEHFGQRLLVKCLSLKFEIEIEPIFASLALY-------------DVKEKKKISENFYFDLNSEQMKGLLR------------PHV--PPAAIT---------------------------TLARSAIFSITYPSQD--VFLVIKLEKVLQ-----------QGD-IGECAEPYMIFKEADATKNKEKLEKLKSQADQFCQRLGKYRMPFAWTAIHLMNIVSSAGSLERDSTEVEISTGGKSRLFIGNINLFSEGDRLSDEDLYKFLADMRRPSSVLRRLRPITAQLKIDISPAPENPHYCLTPELLQVKLYPDSRVRPTREILEFPARDVYVPNTTYRNLLYIYPQSLNFANRQGSARNITVKVQFMYGEDPSNAMPVIFGKSSCSEFSKEAYTAVVYHNRSPDFHEEIKVKLPATLTDHHHLLFTFYHVSCQQK 516
BLAST of mRNA_H-elongata_contig888.16391.1 vs. uniprot
Match: A0A7S3HB30_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HB30_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 1.410e-8 Identity = 31/60 (51.67%), Postives = 45/60 (75.00%), Query Frame = 1
Query: 1486 LPAIF--SHQLGPAFVSECYAQTTYHCRNPQVCDEIKVQLPEHLTSRHRLVFTVFHVHVK 1659
LP+++ S+ GP FV+E Y++ +YH +NP V DE K++LP+ LT+RH + FTV HVHVK
Sbjct: 4 LPSVYNTSYITGPVFVNEAYSRVSYHQKNPAVNDEFKLRLPDVLTARHWIKFTVMHVHVK 63
BLAST of mRNA_H-elongata_contig888.16391.1 vs. uniprot
Match: F7B7Y1_CIOIN (Uncharacterized protein n=1 Tax=Ciona intestinalis TaxID=7719 RepID=F7B7Y1_CIOIN) HSP 1 Score: 68.2 bits (165), Expect = 3.660e-8 Identity = 37/85 (43.53%), Postives = 50/85 (58.82%), Query Frame = 1
Query: 1411 RNLAIRVELRLYPTGLESRASVGESLPAIFSHQLGPAFVSECYAQTTYHCRNPQVCDEIKVQLPEHLTSRHRLVFTVFHVHVKRK 1665
RNLA++V++ LES +L I+ P F SE Y TYH +NP +EIK+QLP +LTSRH L F+ FH+ +RK
Sbjct: 52 RNLAVKVQI------LESEEQCN-ALSLIYGKSNCPEFSSEAYTAITYHNKNPDFYEEIKIQLPTYLTSRHHLFFSFFHISCQRK 129 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig888.16391.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig888.16391.1 >prot_H-elongata_contig888.16391.1 ID=prot_H-elongata_contig888.16391.1|Name=mRNA_H-elongata_contig888.16391.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=419bp MGRSRSTTRTTINVAVHVWCLFPQDKEPTFMFPVNDLEVTISSRGRPFRPback to top mRNA from alignment at H-elongata_contig888:1296..10475- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig888.16391.1 ID=mRNA_H-elongata_contig888.16391.1|Name=mRNA_H-elongata_contig888.16391.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=9180bp|location=Sequence derived from alignment at H-elongata_contig888:1296..10475- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig888:1296..10475- >mRNA_H-elongata_contig888.16391.1 ID=mRNA_H-elongata_contig888.16391.1|Name=mRNA_H-elongata_contig888.16391.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2514bp|location=Sequence derived from alignment at H-elongata_contig888:1296..10475- (Himanthalia elongata Himel1 dioecious)back to top |