prot_H-elongata_contig88767.16389.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig88767.16389.1
Unique Name	prot_H-elongata_contig88767.16389.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	105

Homology

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BLAST of mRNA_H-elongata_contig88767.16389.1 vs. uniprot
Match: A0A6H5JE16_9PHAE (MHD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JE16_9PHAE)

HSP 1 Score: 188 bits (478), Expect = 2.720e-56
Identity = 95/98 (96.94%), Postives = 98/98 (100.00%), Query Frame = 0

Query:    2 EREEMEQKPVFTVEGVTYVYVQYNNLILMSVSKRNSNVALMLVYLYKLVDVFKDYFGELEEESIRDNFVIIYELLDETMDFGYPQTMESKILREYITQ 99
            EREEMEQKP+FTVEGVT+VYVQYNNLILMSV+KRNSNVALMLVYLYKLVDVFKDYFGELEEESIRDNFVIIYELLDETMDFGYPQTMESKILREYITQ
Sbjct:   39 EREEMEQKPIFTVEGVTFVYVQYNNLILMSVTKRNSNVALMLVYLYKLVDVFKDYFGELEEESIRDNFVIIYELLDETMDFGYPQTMESKILREYITQ 136

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BLAST of mRNA_H-elongata_contig88767.16389.1 vs. uniprot
Match: A0A835Z8U5_9STRA (Clathrin assembly complex, medium subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8U5_9STRA)

HSP 1 Score: 174 bits (441), Expect = 8.440e-51
Identity = 86/98 (87.76%), Postives = 94/98 (95.92%), Query Frame = 0

Query:    2 EREEMEQKPVFTVEGVTYVYVQYNNLILMSVSKRNSNVALMLVYLYKLVDVFKDYFGELEEESIRDNFVIIYELLDETMDFGYPQTMESKILREYITQ 99
            EREE +Q+PVFT EG T+VY++YNNL+LMSV+KRNSNVALMLVYLYKL DVF+DYFGELEEESIRDNFVIIYELLDETMDFGYPQTMESKILREYITQ
Sbjct:   39 EREETDQQPVFTEEGYTFVYIRYNNLLLMSVTKRNSNVALMLVYLYKLTDVFRDYFGELEEESIRDNFVIIYELLDETMDFGYPQTMESKILREYITQ 136

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BLAST of mRNA_H-elongata_contig88767.16389.1 vs. uniprot
Match: W7U403_9STRA (Ap-1 complex subunit mu-1-like isoform 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U403_9STRA)

HSP 1 Score: 162 bits (410), Expect = 4.090e-46
Identity = 79/98 (80.61%), Postives = 91/98 (92.86%), Query Frame = 0

Query:    2 EREEMEQKPVFTVEGVTYVYVQYNNLILMSVSKRNSNVALMLVYLYKLVDVFKDYFGELEEESIRDNFVIIYELLDETMDFGYPQTMESKILREYITQ 99
            E+EE EQ+P+FT EG T+ Y++YNNL L+SV+KRNSNVALMLVYL +LVDVFK+YFGELEEESIRDNFVIIYEL+DETMDFGYPQT E+KILREYITQ
Sbjct:   39 EKEESEQRPIFTEEGCTFAYLKYNNLFLLSVTKRNSNVALMLVYLSRLVDVFKEYFGELEEESIRDNFVIIYELMDETMDFGYPQTTEAKILREYITQ 136

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BLAST of mRNA_H-elongata_contig88767.16389.1 vs. uniprot
Match: A0A7S3M290_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M290_9STRA)

HSP 1 Score: 153 bits (386), Expect = 3.430e-45
Identity = 71/98 (72.45%), Postives = 88/98 (89.80%), Query Frame = 0

Query:    2 EREEMEQKPVFTVEGVTYVYVQYNNLILMSVSKRNSNVALMLVYLYKLVDVFKDYFGELEEESIRDNFVIIYELLDETMDFGYPQTMESKILREYITQ 99
            E++EM+ +PVFT +G+TY+Y++ NNL+LM+ +K+NSNV L+L YLYKL  VFKDYFGELEEESIRDNFV++YELLDETMDFGYPQT ESKILRE +TQ
Sbjct:   39 EKDEMDLRPVFTEDGITYIYIKCNNLLLMAATKKNSNVTLILFYLYKLTTVFKDYFGELEEESIRDNFVVVYELLDETMDFGYPQTCESKILREVVTQ 136

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BLAST of mRNA_H-elongata_contig88767.16389.1 vs. uniprot
Match: A0A7S2Y0S1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0S1_9STRA)

HSP 1 Score: 155 bits (393), Expect = 1.110e-43
Identity = 70/96 (72.92%), Postives = 91/96 (94.79%), Query Frame = 0

Query:    4 EEMEQKPVFTVEGVTYVYVQYNNLILMSVSKRNSNVALMLVYLYKLVDVFKDYFGELEEESIRDNFVIIYELLDETMDFGYPQTMESKILREYITQ 99
            EEME +P+FT +G+T++Y++YNNL L++V+K+NSNV L+L+YLYKLV+VFKDYFGELEEESIRDNFVIIYELLDET+DFGYPQ ++SK+L+E+ITQ
Sbjct:   41 EEMEARPIFTEDGITFIYIRYNNLYLLTVTKQNSNVGLILIYLYKLVEVFKDYFGELEEESIRDNFVIIYELLDETVDFGYPQALDSKVLKEFITQ 136

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BLAST of mRNA_H-elongata_contig88767.16389.1 vs. uniprot
Match: F0YHG2_AURAN (MHD domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHG2_AURAN)

HSP 1 Score: 155 bits (392), Expect = 1.540e-43
Identity = 73/98 (74.49%), Postives = 89/98 (90.82%), Query Frame = 0

Query:    2 EREEMEQKPVFTVEGVTYVYVQYNNLILMSVSKRNSNVALMLVYLYKLVDVFKDYFGELEEESIRDNFVIIYELLDETMDFGYPQTMESKILREYITQ 99
            E +EM+Q+P+FT EG T+ Y ++NNL LM V+KRNSN+AL+L+YLY+LV VFKDYFGEL+EESIRDNFVIIYEL+DETMDFGYPQ M+SKILRE+ITQ
Sbjct:   39 ENDEMDQRPIFTDEGFTFAYTKHNNLFLMCVTKRNSNIALLLMYLYRLVTVFKDYFGELDEESIRDNFVIIYELMDETMDFGYPQAMDSKILREFITQ 136

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BLAST of mRNA_H-elongata_contig88767.16389.1 vs. uniprot
Match: A0A662XXV4_9STRA (Clat_adaptor_s domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XXV4_9STRA)

HSP 1 Score: 145 bits (367), Expect = 6.960e-43
Identity = 71/98 (72.45%), Postives = 88/98 (89.80%), Query Frame = 0

Query:    2 EREEMEQKPVFTVEGVTYVYVQYNNLILMSVSKRNSNVALMLVYLYKLVDVFKDYFGELEEESIRDNFVIIYELLDETMDFGYPQTMESKILREYITQ 99
            E+E+ EQ+PVFT +G T+VY+++NNL LM+V+K NSNVALML+YL ++  VF+DYFGELEEESIRDNFVII+ELLDETMD GYPQT E++ILREYITQ
Sbjct:   39 EKEDSEQRPVFTEDGYTFVYLKHNNLYLMTVTKVNSNVALMLMYLNRICQVFQDYFGELEEESIRDNFVIIFELLDETMDHGYPQTTEARILREYITQ 136

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BLAST of mRNA_H-elongata_contig88767.16389.1 vs. uniprot
Match: A0A7S2R9Z0_9STRA (Hypothetical protein n=3 Tax=Dictyochophyceae TaxID=39119 RepID=A0A7S2R9Z0_9STRA)

HSP 1 Score: 153 bits (387), Expect = 1.090e-42
Identity = 73/98 (74.49%), Postives = 88/98 (89.80%), Query Frame = 0

Query:    2 EREEMEQKPVFTVEGVTYVYVQYNNLILMSVSKRNSNVALMLVYLYKLVDVFKDYFGELEEESIRDNFVIIYELLDETMDFGYPQTMESKILREYITQ 99
            E EE + +P+FT +G T+VY+++NNL LM+V+KRN+NVALM  YLY+LV VFKDYFGEL+EESIRDNFVIIYELLDET DFGYPQ+M+SKILREYITQ
Sbjct:   53 ETEEFDMRPIFTEDGYTFVYIKHNNLYLMTVTKRNANVALMFTYLYRLVSVFKDYFGELDEESIRDNFVIIYELLDETNDFGYPQSMDSKILREYITQ 150

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BLAST of mRNA_H-elongata_contig88767.16389.1 vs. uniprot
Match: A0A7S3HYH8_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Favella ehrenbergii TaxID=182087 RepID=A0A7S3HYH8_9SPIT)

HSP 1 Score: 144 bits (362), Expect = 9.620e-42
Identity = 68/99 (68.69%), Postives = 85/99 (85.86%), Query Frame = 0

Query:    1 MEREEMEQKPVFTVEGVTYVYVQYNNLILMSVSKRNSNVALMLVYLYKLVDVFKDYFGELEEESIRDNFVIIYELLDETMDFGYPQTMESKILREYITQ 99
            +E EE +++PV+   G TYVY++YNNL +M+V++RNSN A++L++LY+LVDVFKDYF ELEEESIRDNFVI YEL+DE MDFGYPQ  E KILREYITQ
Sbjct:   23 LEAEEADERPVWLEHGTTYVYIKYNNLYIMAVTQRNSNAAMILLFLYRLVDVFKDYFKELEEESIRDNFVITYELMDEMMDFGYPQVSEPKILREYITQ 121

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BLAST of mRNA_H-elongata_contig88767.16389.1 vs. uniprot
Match: A0A6V1S3S6_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S3S6_HETAK)

HSP 1 Score: 145 bits (366), Expect = 1.000e-39
Identity = 67/98 (68.37%), Postives = 87/98 (88.78%), Query Frame = 0

Query:    2 EREEMEQKPVFTVEGVTYVYVQYNNLILMSVSKRNSNVALMLVYLYKLVDVFKDYFGELEEESIRDNFVIIYELLDETMDFGYPQTMESKILREYITQ 99
            E +E++Q PVFT +G+TY+YV+ +NL+L++ ++RN+N AL+L YLY LV  FKDYFGELEEESIRDNFVIIYEL+DETMDFGYPQ ++SK+LRE+ITQ
Sbjct:   39 ETDELDQHPVFTEDGITYMYVRVSNLLLLATTRRNANAALVLTYLYGLVQCFKDYFGELEEESIRDNFVIIYELMDETMDFGYPQVLDSKVLREFITQ 136

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig88767.16389.1 vs. uniprot

BLAST of mRNA_H-elongata_contig88767.16389.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JE16_9PHAE	2.720e-56	96.94	MHD domain-containing protein n=2 Tax=Ectocarpus T...	[more]
A0A835Z8U5_9STRA	8.440e-51	87.76	Clathrin assembly complex, medium subunit n=1 Tax=...	[more]
W7U403_9STRA	4.090e-46	80.61	Ap-1 complex subunit mu-1-like isoform 1 n=2 Tax=M...	[more]
A0A7S3M290_9STRA	3.430e-45	72.45	Hypothetical protein (Fragment) n=1 Tax=Spumella e...	[more]
A0A7S2Y0S1_9STRA	1.110e-43	72.92	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
F0YHG2_AURAN	1.540e-43	74.49	MHD domain-containing protein n=1 Tax=Aureococcus ...	[more]
A0A662XXV4_9STRA	6.960e-43	72.45	Clat_adaptor_s domain-containing protein (Fragment...	[more]
A0A7S2R9Z0_9STRA	1.090e-42	74.49	Hypothetical protein n=3 Tax=Dictyochophyceae TaxI...	[more]
A0A7S3HYH8_9SPIT	9.620e-42	68.69	Hypothetical protein (Fragment) n=1 Tax=Favella eh...	[more]
A0A6V1S3S6_HETAK	1.000e-39	68.37	Hypothetical protein n=2 Tax=Heterosigma akashiwo ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022775	AP complex, mu/sigma subunit	PFAM	PF01217	Clat_adaptor_s	coord: 11..91 e-value: 4.4E-6 score: 26.7
None	No IPR available	GENE3D	3.30.450.60		coord: 1..103 e-value: 4.1E-41 score: 142.1
None	No IPR available	PANTHER	PTHR10529:SF262	ADAPTOR PROTEIN COMPLEX 1, MU SUBUNIT	coord: 4..100
None	No IPR available	PANTHER	PTHR10529	LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED	coord: 4..100
IPR011012	Longin-like domain superfamily	SUPERFAMILY	64356	SNARE-like	coord: 7..99

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig88767	contig	H-elongata_contig88767:2007..2633 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig88767.16389.1	mRNA_H-elongata_contig88767.16389.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig88767 1980..2633 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig88767.16389.1 ID=prot_H-elongata_contig88767.16389.1|Name=mRNA_H-elongata_contig88767.16389.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=105bp
MEREEMEQKPVFTVEGVTYVYVQYNNLILMSVSKRNSNVALMLVYLYKLV
DVFKDYFGELEEESIRDNFVIIYELLDETMDFGYPQTMESKILREYITQV
RTDY*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR022775	AP_mu_sigma_su
IPR011012	Longin-like_dom_sf