prot_H-elongata_contig88760.16388.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig88760.16388.1
Unique Nameprot_H-elongata_contig88760.16388.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length158
Homology
BLAST of mRNA_H-elongata_contig88760.16388.1 vs. uniprot
Match: A0A6H5KGT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGT1_9PHAE)

HSP 1 Score: 137 bits (346), Expect = 1.610e-35
Identity = 77/150 (51.33%), Postives = 97/150 (64.67%), Query Frame = 0
Query:    2 PIAPLEVVDDQPPPARRGHGQATRSPGDQRPARYVRTQLPLAVAFAINIHKSQGQALLRAVVDIGSSEQTDGQTFTALSRLRTMEGLLLEDIDLDRLLHIGQGNSFQLRLGAIQRIRDLKDQTRGRKGLPALARTPRVQRPESSSARGQG 151
            PIAP++V+DDQPP  RR  G  T        AR  R QLPL +AF I I+KSQG  LLR  +DIG+SE++DGQ+FTA SR RT+E +LLE   L+R L IG   SFQ RL AI  +R ++D+TR + GLP + RT R  R    + RG G
Sbjct:  160 PIAPMDVMDDQPPTGRR-RGDGTSI------ARCFRMQLPLMLAFGITIYKSQGNTLLRCFLDIGASERSDGQSFTAFSRCRTLENMLLEPFSLERFLKIGDSRSFQSRLNAIDHVRTVEDRTRRQHGLPPIVRTARPPRTRRRAGRGGG 302          
BLAST of mRNA_H-elongata_contig88760.16388.1 vs. uniprot
Match: A0A6H5KDL6_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDL6_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 2.070e-34
Identity = 76/150 (50.67%), Postives = 96/150 (64.00%), Query Frame = 0
Query:    2 PIAPLEVVDDQPPPARRGHGQATRSPGDQRPARYVRTQLPLAVAFAINIHKSQGQALLRAVVDIGSSEQTDGQTFTALSRLRTMEGLLLEDIDLDRLLHIGQGNSFQLRLGAIQRIRDLKDQTRGRKGLPALARTPRVQRPESSSARGQG 151
            PIAP++V+DDQPP  RR  G  T        AR  R QLPL +AF I I+KS G  LLR  +DIG+SE++DGQ+FTA SR RT+E +LLE   L+R L IG   SFQ RL AI  +R ++D+TR + GLP + RT R  R    + RG G
Sbjct:  315 PIAPMDVMDDQPPTGRR-RGDGTSI------ARCFRMQLPLMLAFGITIYKSHGNTLLRCSLDIGASERSDGQSFTAFSRCRTLENMLLEPFSLERFLKIGDSRSFQSRLNAIDHVRTVEDRTRRQHGLPPIVRTARPPRTRRRAGRGGG 457          
BLAST of mRNA_H-elongata_contig88760.16388.1 vs. uniprot
Match: A0A6H5K558_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K558_9PHAE)

HSP 1 Score: 135 bits (341), Expect = 5.260e-34
Identity = 76/150 (50.67%), Postives = 97/150 (64.67%), Query Frame = 0
Query:    2 PIAPLEVVDDQPPPARRGHGQATRSPGDQRPARYVRTQLPLAVAFAINIHKSQGQALLRAVVDIGSSEQTDGQTFTALSRLRTMEGLLLEDIDLDRLLHIGQGNSFQLRLGAIQRIRDLKDQTRGRKGLPALARTPRVQRPESSSARGQG 151
            PIAP++V+DDQPP  RR  G  T        AR  R QLPL +AF I I+KSQG  LLR  +DIG+SE++DGQ+FTA SR RT+E +LLE   L+R L IG   SFQ RL AI  +R ++++TR + GLP + RT R  R    + RG G
Sbjct:  719 PIAPMDVMDDQPPTGRR-RGDGTSI------ARCFRMQLPLMLAFGITIYKSQGNTLLRCFLDIGASERSDGQSFTAFSRCRTLENMLLEPFSLERFLKIGDSRSFQSRLNAIDHVRTVENRTRRQHGLPPIVRTARPPRTRRRAGRGGG 861          
BLAST of mRNA_H-elongata_contig88760.16388.1 vs. uniprot
Match: A0A6H5K5P8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5P8_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 8.760e-34
Identity = 73/146 (50.00%), Postives = 93/146 (63.70%), Query Frame = 0
Query:    6 LEVVDDQPPPARRGHGQATRSPGDQRPARYVRTQLPLAVAFAINIHKSQGQALLRAVVDIGSSEQTDGQTFTALSRLRTMEGLLLEDIDLDRLLHIGQGNSFQLRLGAIQRIRDLKDQTRGRKGLPALARTPRVQRPESSSARGQG 151
            ++V+DDQPP  RR  G  T        AR  R QLPL +AF I I+KSQG  LLR  +DIG+SE++DGQ+FTA SR RT+E +LLE   L+R L IG   SFQ RL AI  +R ++D+TR + GLP + RT R  R    + RG G
Sbjct:    1 MDVMDDQPPTGRR-RGDGTSI------ARCFRMQLPLLLAFGITIYKSQGNTLLRCFLDIGASERSDGQSFTAFSRCRTLENMLLEPFSLERFLKIGDSRSFQSRLNAIDHVRTVEDRTRRQHGLPPIVRTARPPRTRRRAGRGGG 139          
BLAST of mRNA_H-elongata_contig88760.16388.1 vs. uniprot
Match: A0A6H5K692_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K692_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 2.050e-29
Identity = 71/145 (48.97%), Postives = 94/145 (64.83%), Query Frame = 0
Query:    1 MPIAPLEVVDDQPPPA--RRGHGQATRSPGDQRPARYVRTQLPLAVAFAINIHKSQGQALLRAVVDIGSSEQTDGQTFTALSRLRTMEGLLLEDID-LDRLLHIGQGNSFQLRLGAIQRIRDLKDQTRGRKGLPALARTPRVQRP 142
            +PI+P++  DD PP A  RRG G  T + G     R +RTQLPL +AF I IHKSQG  LLR  +DIG  E++DGQTFTALSR R ++ +LL+ +  L+RL  IG   +F  RL A+ R+R+L +QTR +  L A+   PR  RP
Sbjct: 1528 VPISPIDAPDDHPPAALRRRGGGANTNAQG-----RCIRTQLPLMLAFGITIHKSQGATLLRCFLDIGEQEKSDGQTFTALSRCRALDNMLLQPLFCLERLQRIGTSRTFGARLDALHRVRELANQTRVQNELDAIDIPPRRHRP 1667          
BLAST of mRNA_H-elongata_contig88760.16388.1 vs. uniprot
Match: A0A6H5KSF1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSF1_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 1.400e-15
Identity = 43/106 (40.57%), Postives = 61/106 (57.55%), Query Frame = 0
Query:   20 HGQATRSPGDQRPARYVRTQLPLAVAFAINIHKSQGQALLRAVVDIGSSEQTDGQTFTALSRLRTMEGLLLEDIDLDRLLHIGQGNSFQLRLGAIQRIRDLKDQTR 125
            HGQ     G Q     VRTQLPL + +AI +HKSQGQ L +AV+D+G  E   G TF  LSR + +  L++E +  DR+ ++G   + + RL    R+ +L   TR
Sbjct:    3 HGQKGEDGGTQ-----VRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRLGELAQSTR 103          
BLAST of mRNA_H-elongata_contig88760.16388.1 vs. uniprot
Match: A0A6S7GL72_PARCT (ATP-dependent DNA helicase PIF1 n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GL72_PARCT)

HSP 1 Score: 78.2 bits (191), Expect = 1.240e-14
Identity = 39/88 (44.32%), Postives = 59/88 (67.05%), Query Frame = 0
Query:   37 RTQLPLAVAFAINIHKSQGQALLRAVVDIGSSEQTDGQTFTALSRLRTMEGLLLEDIDLDRLLHIGQGNSFQLRLGAIQRIRDLKDQT 124
            R Q+PL + +A+ IHKSQGQ L +AVVD+G  E+  G TF A SR+R++  ++ E +  DRL  IG+  + Q RL A +R++ L ++T
Sbjct:  143 RQQVPLRLRYAMTIHKSQGQTLTKAVVDLGKGEKVAGCTFVATSRVRSIHDIVFESMTFDRLKVIGRSKNMQKRLKAEERLKVLAEKT 230          
BLAST of mRNA_H-elongata_contig88760.16388.1 vs. uniprot
Match: A0A6S7HMN7_PARCT (ATP-dependent DNA helicase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HMN7_PARCT)

HSP 1 Score: 79.3 bits (194), Expect = 2.940e-14
Identity = 40/88 (45.45%), Postives = 59/88 (67.05%), Query Frame = 0
Query:   37 RTQLPLAVAFAINIHKSQGQALLRAVVDIGSSEQTDGQTFTALSRLRTMEGLLLEDIDLDRLLHIGQGNSFQLRLGAIQRIRDLKDQT 124
            R Q+PL + +A+ IHKSQGQ L +AVVD+G  E+  G TF A SR+R++  ++ E +  DRL  IG+  + Q RL A QR++ L ++T
Sbjct:  790 RQQVPLRLRYAMTIHKSQGQTLTKAVVDLGKGEKVAGCTFVATSRVRSIHDIVFEPMTFDRLKAIGRSKNMQKRLEAEQRLKVLAEKT 877          
BLAST of mRNA_H-elongata_contig88760.16388.1 vs. uniprot
Match: A0A6S7JYZ9_PARCT (ATP-dependent DNA helicase PIF1 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JYZ9_PARCT)

HSP 1 Score: 79.3 bits (194), Expect = 2.970e-14
Identity = 40/88 (45.45%), Postives = 59/88 (67.05%), Query Frame = 0
Query:   37 RTQLPLAVAFAINIHKSQGQALLRAVVDIGSSEQTDGQTFTALSRLRTMEGLLLEDIDLDRLLHIGQGNSFQLRLGAIQRIRDLKDQT 124
            R Q+PL + +A+ IHKSQGQ L +AVVD+G  E+  G TF A SR+R++  ++ E +  DRL  IG+  + Q RL A QR++ L ++T
Sbjct:  890 RQQVPLRLRYAMTIHKSQGQTLTKAVVDLGKGEKVAGCTFVATSRVRSIHDIVFEPMTFDRLKAIGRSKNMQKRLQAEQRLKVLAEKT 977          
BLAST of mRNA_H-elongata_contig88760.16388.1 vs. uniprot
Match: A0A6S7FT29_PARCT (ATP-dependent DNA helicase PIF1 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7FT29_PARCT)

HSP 1 Score: 79.3 bits (194), Expect = 3.040e-14
Identity = 40/88 (45.45%), Postives = 59/88 (67.05%), Query Frame = 0
Query:   37 RTQLPLAVAFAINIHKSQGQALLRAVVDIGSSEQTDGQTFTALSRLRTMEGLLLEDIDLDRLLHIGQGNSFQLRLGAIQRIRDLKDQT 124
            R Q+PL + +A+ IHKSQGQ L +AVVD+G  E+  G TF A SR+R++  ++ E +  DRL  IG+  + Q RL A QR++ L ++T
Sbjct: 1015 RQQVPLRLRYAMTIHKSQGQTLTKAVVDLGKGEKVAGCTFVATSRVRSIHDIVFEPMTFDRLKAIGRSKNMQKRLEAEQRLKVLAEKT 1102          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig88760.16388.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KGT1_9PHAE1.610e-3551.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDL6_9PHAE2.070e-3450.67ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5K558_9PHAE5.260e-3450.67ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5K5P8_9PHAE8.760e-3450.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K692_9PHAE2.050e-2948.97ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KSF1_9PHAE1.400e-1540.57Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6S7GL72_PARCT1.240e-1444.32ATP-dependent DNA helicase PIF1 n=3 Tax=Paramurice... [more]
A0A6S7HMN7_PARCT2.940e-1445.45ATP-dependent DNA helicase n=1 Tax=Paramuricea cla... [more]
A0A6S7JYZ9_PARCT2.970e-1445.45ATP-dependent DNA helicase PIF1 n=1 Tax=Paramurice... [more]
A0A6S7FT29_PARCT3.040e-1445.45ATP-dependent DNA helicase PIF1 n=1 Tax=Paramurice... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR23274:SF11ATP-DEPENDENT DNA HELICASE PIF1coord: 31..139
NoneNo IPR availablePANTHERPTHR23274DNA HELICASE-RELATEDcoord: 31..139
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 23..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig88760contigH-elongata_contig88760:584..1092 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig88760.16388.1mRNA_H-elongata_contig88760.16388.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig88760 238..1660 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig88760.16388.1 ID=prot_H-elongata_contig88760.16388.1|Name=mRNA_H-elongata_contig88760.16388.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=158bp
MPIAPLEVVDDQPPPARRGHGQATRSPGDQRPARYVRTQLPLAVAFAINI
HKSQGQALLRAVVDIGSSEQTDGQTFTALSRLRTMEGLLLEDIDLDRLLH
IGQGNSFQLRLGAIQRIRDLKDQTRGRKGLPALARTPRVQRPESSSARGQ
GTRGKRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase