mRNA_H-elongata_contig12140.1638.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig12140.1638.1 vs. uniprot
Match: D7FLN1_ECTSI (Asparagine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLN1_ECTSI) HSP 1 Score: 816 bits (2107), Expect = 3.310e-288 Identity = 453/660 (68.64%), Postives = 503/660 (76.21%), Query Frame = 1
Query: 1 LAGIQLQPKFGLSQGEIEAACPAARGVVLRVSRPSPASTV----MVAQSNAILRALAEAAPESLLRGRTEFESAQVDQWLETCWMEFEVPLKALSAASTNQSVIAEAKRNLISFLEVANARLSTSTLLVGQRTTIADVAVACAAQDAIESSGAG-VIIFGPKDLSGLPHLLRWYQTVIRHPAFASPSCPPPDDVRGTPASAALDQNNIGGAKPQKKDVAAAPASTSRGFLSNANGDAGYGDAAEKPLPVIGEGGDLLSSAAVVQGARTLALAPARFRRKRVRVRELLASGTVLVGQKAVVKGWLRTARAASKGKLLFLVVDDGSCSETV--VVSREAPGFDAVANCGGVGASVSVLGEVVASKGKGQEVEIKAEEVEVLGCVYEPDGTVGASTYPLAKKAHSLEFLRTIAHLRPRTKASKRETGRTAMHLTPNSIMHSAAMRVRHAMAFATHKFFNDRGFLYIHTPIVTGADCEGAGEQFAVSTLLA-----EGEKIGSSNGEVVPVTSTGAVDYSKAGLFGLLDFFARRTCLTVSGQLNVETHACALGDVYTFGPTFRAENSHTSRHLAEFWMIEPEVAFADLKDDIDLAEDYLKYLVAYALAHCQGDLEYFESCPGGEPGLRKRLQNVLENDFVRMTYTELVELVRKDAKEGKVRIGI 1944
+AGI L K G+S+ E+EA P A+G+VL+V RP A+ V V QSNAILR LA A +S L GR+EFESAQ DQWLETCW E EVP +AL+AAS NQ+VIAEAKR+L+SFL ANA LSTST LVG+RTTIADV +ACAA+D IE S AG G +DL+GLPH+LRWY+TV HPAF++ + A ++PLPV+GE GDL+SSA+VVQG+R L +APARFRRKRVRVRELLASGT +VGQKAVVKGWLRTARAASKG LLFLVVDDGSCS TV VVS+ APGFDA A+CGGVGASVSVLG VVASKGKGQ+VEIKA+EVEVLGCVYEPDGTVGASTYPLAKKAHSLEFLR+IAHLRPRTK MHSAAMRVRHAMAFATHKFFNDRGFLYIHTPIVTGADCEGAGEQFAVSTLL EG ++ G P+T GAVDYSK DFFARRTCLTVSGQLNVETHAC+LGDVYTFGPTFRAENSHTSRHLAEFWMIEPEVAFADLKDD+DLAEDYLKYLVAYAL HCQGDLE+FE+CPGGEPGLR+RL+NVL+NDFVRMTYTELV+LVRKDAKEGKV +
Sbjct: 41 MAGIDLDLKTGMSEEEMEAFAPLAKGLVLKVCRPGQAAPVGGEEAVTQSNAILRTLAMAKADSSLYGRSEFESAQADQWLETCWKELEVPAQALAAASGNQAVIAEAKRHLLSFLATANATLSTSTFLVGERTTIADVGLACAARDLIEGSVAGGAASLGARDLAGLPHVLRWYRTVTHHPAFSATAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------XXXXXXXXXXXXXXXAGDEPLPVVGESGDLMSSASVVQGSRRLEVAPARFRRKRVRVRELLASGTSVVGQKAVVKGWLRTARAASKGALLFLVVDDGSCSGTVQVVVSKGAPGFDAAASCGGVGASVSVLGTVVASKGKGQDVEIKADEVEVLGCVYEPDGTVGASTYPLAKKAHSLEFLRSIAHLRPRTK------------------MHSAAMRVRHAMAFATHKFFNDRGFLYIHTPIVTGADCEGAGEQFAVSTLLPDAGGEEGNGHAAAAGGGPPMTPAGAVDYSK-------DFFARRTCLTVSGQLNVETHACSLGDVYTFGPTFRAENSHTSRHLAEFWMIEPEVAFADLKDDMDLAEDYLKYLVAYALGHCQGDLEFFETCPGGEPGLRERLKNVLQNDFVRMTYTELVDLVRKDAKEGKVEFSV 668
BLAST of mRNA_H-elongata_contig12140.1638.1 vs. uniprot
Match: A0A835YW11_9STRA (Asparagine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW11_9STRA) HSP 1 Score: 558 bits (1437), Expect = 1.760e-187 Identity = 324/637 (50.86%), Postives = 410/637 (64.36%), Query Frame = 1
Query: 64 PAARGVVLRVSRPSPASTVMVAQSNAILRALAEAAPESLLRGRTEFESAQVDQWLETCWMEFEVPLKALSAASTNQSVIAEAKRNLISFLEVANARLSTSTLLVGQRTTIADVAVACAAQDAIESSGAGVIIFGPKDLSGLPHLLRWYQTVIRHPAFASPSCPPPDDVRGTPASAALDQNNIGGAKPQKKDVAAAPASTSRGFLSNANGDAGYGDAA----EKPLPVIGEGGDLLSSAAVVQGARTLALAPARFRRKRVRVRELLASGTVLVGQKAVVKGWLRTARAASKGKLLFLVVDDGSCSET--VVVSREAP-GFDAVANCGGVGASVSVLGEVVASKGKGQEVEIKAEEVEVLGCVYEPDGTVGASTYPLAKKAHSLEFLRTIAHLRPRTKASKRETGRTAMHLTPNSIMHSAAMRVRHAMAFATHKFFNDRGFLYIHTPIVTGADCEGAGEQFAVSTLL---AEGEKIGSSNGEV-VPVTSTGAVDYSKAGLFGLLDFFARRTCLTVSGQLNVETHACALGDVYTFGPTFRAENSHTSRHLAEFWMIEPEVAFADLKDDIDLAEDYLKYLVAYALAHCQGDLEYFES--CPGGEPGLRKRLQNVLENDFVRMTYTELVELVRKDAKEGKVR 1935
PAA+ + LR++RP+ A + QSNAI+R L +A+ S L G TEF +QVD WLE CW+E E PL L A + VIAEAK+ ++ L NA L+ T LVG R T AD+A+ACAAQ + GA + KDL+ LPH RWY TV H AFA+ GT +N+ DA + A+ +KPL ++ APA++RR+RVRV+ELLA G G+ VV+GWL+TAR+ +K LLFLVV+DGSC + VV SR+ GF A A+CGGVGA V+V G ++ S KGQ +E++A++VEVLG VY+ DG++GA+ YPLAKKAHSLE+LRT AHLRPRT +++SA MRVR+AMA+ATH+FFN+RGF+Y+HTP++TGADCEGAGEQF V+TLL AEG G G V +P + G++DY+K DFF++R CLTVSGQLNVET+ A+ DVYTFGPTFRAENSHTSRHLAEFWMIEPE+AFADL+DD++LAEDYLKYLVA+AL HC DL YFES CPGGE LR RL+NVLENDFVR+TYT V L+ + GKV+
Sbjct: 60 PAAKALALRITRPTSAHPSYITQSNAIVRTLIDASETSGLYGDTEFARSQVDSWLELCWLELETPLAVLQQAKGHGDVIAEAKKLILHALTAVNAALAARTYLVGNRLTAADIALACAAQPIL---GAAASVLSGKDLATLPHAARWYMTVTHHAAFAT----------GTSXXXXXXXXXXXXXXXXXXXX--------XXXXANSTVDAAFYQASAVHTDKPLSMV---------------------APAKYRRRRVRVKELLARGAAAAGETVVVRGWLKTARSGAKDTLLFLVVNDGSCHSSLQVVASRDGTEGFAAAASCGGVGACVAVEGPIIESPAKGQVIEMQAKKVEVLGPVYQSDGSIGAADYPLAKKAHSLEYLRTHAHLRPRT------------------MVYSAVMRVRNAMAYATHRFFNERGFVYVHTPLLTGADCEGAGEQFVVTTLLPAAAEGHACG---GRVELPRLADGSIDYTK-------DFFSKRACLTVSGQLNVETYCSAMSDVYTFGPTFRAENSHTSRHLAEFWMIEPEIAFADLEDDMNLAEDYLKYLVAHALEHCDEDLTYFESKDCPGGEADLRARLRNVLENDFVRITYTRAVALLEEHIASGKVK 626
BLAST of mRNA_H-elongata_contig12140.1638.1 vs. uniprot
Match: W7TB32_9STRA (Asparagine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TB32_9STRA) HSP 1 Score: 450 bits (1157), Expect = 2.260e-145 Identity = 296/673 (43.98%), Postives = 378/673 (56.17%), Query Frame = 1
Query: 1 LAGIQLQPKFGLSQGEIEAACPAARGVVLRVSRPSPASTVMVAQSNAILRALAEAAPESLLRGRTEFESAQVDQWLETCWMEFEVPLKALSAASTNQSVIA---EAKRNLISFLEVANARLSTSTLLVGQRTTIADVAVACAAQDAIESSGAGVIIFGPKDLSGLPHLLRWYQTVIRHPAF--ASPS-----------CPPPDDVRGTPASAALDQNNIGGAKPQKKDVAAAPASTSRGFLSNANGDAGYGDAAEKP--LPVIGEGGDLLSSAAVVQGARTLALAPARFRRKRVRVRELLAS-GTVLVGQKAVVKGWLRTARAASKGKLLFLVVDDGSCS---ETVVVSREAPGFDAV--ANCGGVGASVSVLGEVVASKGKGQEVEIKAEEVEVLGCVYE-PDGTVGASTYPLAKKAHSLEFLRTIAHLRPRTKASKRETGRTAMHLTPNSIMHSAAMRVRHAMAFATHKFFNDRGFLYIHTPIVTGADCEGAGEQFAVSTLLAEGEKIGSSNGEVVPVTSTGAVDYSKAGLFGLLDFFARRTCLTVSGQLNVETHACALGDVYTFGPTFRAENSHTSRHLAEFWMIEPEVAFADLKDDIDLAEDYLKYLVAYALAHCQGDLEYFESCPGGEPGLRKRLQNVLENDFVRMTYTELVELVRKDAKEGKVRIGI 1944
LAG++L + + P + +VL V S S ++A+SN LR LAE +P + L G T +E+ VDQWL+ + E P + Q +A A+R + + V + L ST L G + T+ADV V CA D + AG + L P +LRW+ T++ P F SP P R A L +N G +P K +A A A+ + S G AG G ++ KP LP G L F R+R +++LL G VG+ +KGW+RT RA +KG LLF+ ++DGS + + V+ + + GF A+CGGVGAS S+ G +V S +GQ VE+ A VEVLG VY DG VG YPL+KKAHS+E+LR AHLR RT R TG + MRVRHAMA+ATHKFFNDRGF Y+HTP++TGADCEGAGE F V+TLL E +P+ G++DYS+ DFF RRT LTVSGQLNVET+AC L DVYTFGPTFRAENSHT+RHLAEFWMIEPE+AFADL+ D+ LAEDYLKY V YAL H + DL E PGGE GLR+RL+NVLEN FVR+TYTE V + KD KV +
Sbjct: 26 LAGVELSVSLQEDPEILSSLVPHGKSLVLEVQSAS-GSPFLIARSNVALRFLAENSPAAGLYGETLYEAGLVDQWLDFSFNSLETPAAVMHLPPDAQVPLAVKETARREVEGAVRVLDEALEKSTFLAGHKVTLADVGVFCALYDLVGVENAGSMSIA---LENFPGVLRWFLTLLHQPCFQHVSPGEADKMKRLQAKLPSVGSTRRKLAEGPLAEN--GNRRPSKAGIAGARATQASAAKS---GPAGGGRSSTKPPLLPKDGPDSSL-------------------FDRRRTVIKQLLVERGEAAVGETVTIKGWVRTIRAGNKGALLFIELNDGSTALSMQAVLEADKTQGFAEATPASCGGVGASFSITGTLVRSPAEGQAVELHATVVEVLGKVYGGEDGGVGGKLYPLSKKAHSMEYLRCNAHLRART----RVTG--------------SVMRVRHAMAYATHKFFNDRGFKYVHTPLITGADCEGAGEMFTVTTLLPE------KGAPRLPIRPDGSIDYSQ-------DFFGRRTSLTVSGQLNVETYACGLSDVYTFGPTFRAENSHTTRHLAEFWMIEPEIAFADLEMDMALAEDYLKYCVWYALRHNEEDLVLLEKVPGGEAGLRERLRNVLENPFVRITYTEAVATLEKDLAAEKVAFQV 639
BLAST of mRNA_H-elongata_contig12140.1638.1 vs. uniprot
Match: A0A8J2SLQ1_9STRA (Asparagine--tRNA ligase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SLQ1_9STRA) HSP 1 Score: 413 bits (1062), Expect = 1.560e-131 Identity = 280/650 (43.08%), Postives = 356/650 (54.77%), Query Frame = 1
Query: 1 LAGIQLQPKFGLSQGEIEAACPAARGVVLRVSRPSPASTVMVAQSNAILRALAEAAPESLLRGRTEFESAQVDQWLETCWMEFEVPLKALSAASTNQSVIAEAKRNLISFLEVANARLSTSTLLVGQRTTIADVAVACAAQDAIESSGAGVIIFGPKDLSGLPHLLRWYQTVIRHPAFASPSCPPPDDVRGTPASAALDQNNIGGAKPQKKDVAAAPASTSRGFLSNANGDAGYGDAAEKPLPVIGEGGDLLSSAAVVQGARTLALAPARFRRKRVRVRELLASGTVLVGQKAVVKGWLRTARAASKGKLLFLVVDDGSCSETVVV---SREAPGFDAVANCGGVGASVSVLGEVVASKGKGQEVEIKAEEVEVLGCVYE-PDGTVGASTYPLAKKAHSLEFLRTIAHLRPRTKASKRETGRTAMHLTPNSIMHSAAMRVRHAMAFATHKFFNDRGFLYIHTPIVTGADCEGAGEQFAVSTLLA-EGEKIGSSNGEVVPVTSTGAVDYSKAGLFGLLDFFARRTCLTVSGQLNVETHACALGDVYTFGPTFRAENSHTSRHLAEFWMIEPEVAFADLKDDIDLAEDYLKYLVAYALAHCQGDLEYFESCPGGEPGLRKRLQNVLENDFVRMTYTELVELVRKDAKEGKVR 1935
LA I+L+ + E+ CP A VVL ++R P V +S+A+L+ ++ P + L G F +VDQWLE E EV + A + + N+ V+ A +++ +A L +T L G R + AD AV C + A+++ GP LLRWY T + PAF+S + G A + G P K AAA A S +A V RTL P F R R R++ELL G VG VV GW+RT R A KG LF+ ++DGSC ++ V S GF A CGG GAS+ V G VV S GKGQ +EI A+ + VLGC P TVGA TYPLAKK H+LE LRT AHLRPR++ SA +R+R+A+AFATH+FF RGFLY+HTP++T ADCEGAGEQF V+TLL E +K +P T G VDYSK DFF R+ LTVSGQLNVETHA +L D YTFGPTFRAENS+TSRHLAEFWMIEPEV+FA L DDI LAEDYLKY VA AL C DLE+FE GLR RL+ ++E F R+ YTE + +++K+ K G+ +
Sbjct: 47 LANIKLRITAAKDEAELTKLCPHAATVVL-MTRNGP-----VTRSDAVLKYVSGLNPATELCGADGFGRGRVDQWLEFGTHELEVAVVAATTHAKNKEVVNRATKDVQQACRTLDAALQKTTYLAGDRVSAADCAVVCVLRAALKNQLIATSKLGPS-------LLRWYLTCLHAPAFSS--------ILGADAKNDALKALPAGKAPTSKKTAAAKAKAS-------------------------------PTAKAVADPRTL-FTPT-FARSRERLKELLGRGAAAVGATVVVAGWVRTLREAMKGATLFVELNDGSCLASIQVVCGSDSTEGFAAAKACGGAGASLRVEGAVVESPGKGQTIEILAKAITVLGCTRGGPGRTVGAQTYPLAKKYHTLEHLRTHAHLRPRSRVG------------------SAVVRLRNALAFATHEFFQQRGFLYVHTPLITAADCEGAGEQFTVTTLLPPEHDKA-----PKLP-TVDGRVDYSK-------DFFGRQASLTVSGQLNVETHAVSLADCYTFGPTFRAENSNTSRHLAEFWMIEPEVSFATLADDIALAEDYLKYCVAAALCRCADDLEFFEGSKN--EGLRDRLKAIVETPFKRLEYTEAISVLQKEMKAGRAK 609
BLAST of mRNA_H-elongata_contig12140.1638.1 vs. uniprot
Match: A0A7S2ARR7_9STRA (Asparagine--tRNA ligase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ARR7_9STRA) HSP 1 Score: 411 bits (1056), Expect = 2.160e-130 Identity = 276/659 (41.88%), Postives = 355/659 (53.87%), Query Frame = 1
Query: 1 LAGIQLQPKFGLSQGEIEAACPAARGVVLRVSRPSPASTVMVAQSNAILRALAEAAPESLLRGRTEFESAQVDQWLETCWMEFEVPLKALSA-----------ASTNQSVIAEAKRNLISFLEVANARLSTSTLLVGQRTTIADVAVACAAQDAIESSGAGVIIFGPKDLSGLPHLLRWYQTVIRHPAFASPSCPPPDDVRGTPASAALDQNNIGGAKPQKKDVAAAPASTSRGFLSNANGDAGYGDAAEKPLPVIGEGGDLLSSAAVVQGARTLALAPARFRRKRVRVRELLASGTVLVGQKAVVKGWLRTARAASKGKLLFLVVDDGSCSETV--VVSREAPGFDAVANCGGVGASVSVLGEVVASKGKGQEVEIKAEEVEVLGCVYEPD-GTVGASTYPLAKKAHSLEFLRTIAHLRPRTKASKRETGRTAMHLTPNSIMHSAAMRVRHAMAFATHKFFNDRGFLYIHTPIVTGADCEGAGEQFAVSTLLAEGEKIGSSNGEVVPVTSTGAVDYSKAGLFGLLDFFARRTCLTVSGQLNVETHACALGDVYTFGPTFRAENSHTSRHLAEFWMIEPEVAFADLKDDIDLAEDYLKYLVAYALAHCQGDLEYFESCPGGEPGLRKRLQNVLENDFVRMTYTELVELVRKDAKEGKVR 1935
L G+ L+ L + E E+ P AR VL S + Q++ ILR LAE P+ L G T FE A V+QWLE CW E EV + AL+ AS Q + +A R L E N L++ T +VG T+A+ A+ + + + P D PH+LRW++T+ A + P D + + KP K VAA P GG LS+ V P +F+R R RV++LL G VG+ V GW +T RAA+KGK+LF+V+ DGSC++ + V+ PGF +NCGG GAS S+LG+VV S G GQ VE+ + EVLG VY D G VG YPL+KK HS E LR AHLRPR ++ ++A RVR+ MAFATHKFF +RGF Y+HTP++T +DCEGAGE FAV+T L K S G++ VDYSK DFF + LTVSGQLNVETHAC L D YTFGPTFRAE+SHTSRHLAEFWMIEPE+ FADLKDD DLAEDYLK+ V AL C +LE E P G+ LR+RLQ ++E F R TYTE ++++ + +G V+
Sbjct: 48 LVGVPLESLI-LKEDEFESLLPNARSCVLVTKDGS------LTQTSTILRYLAELRPDLTLSGATGFEQAMVNQWLEFCWFELEVLVGALTIRPDESEGTFDPASIRQILSRDAARAL----ECLNKHLASHTFMVGNGITLAEAALVPTLVEVLSK------MLMPGDARLYPHVLRWFKTLAHGNADFAAVLQVPTDFKP-----------LAPLKPSK--VAAXXXXXXXXXXXXXXXXXXXXX--XXXXPTASPGG--LSAGNVKDPF------PMKFKRTRTRVKDLLKRGAQAVGEIITVCGWAQTVRAANKGKILFVVITDGSCTQALQCVIDSNIPGFAEASNCGGTGASFSLLGKVVESPGAGQSVELVVQSAEVLGKVYGGDNGEVGGKYYPLSKKGHSAEHLRDHAHLRPRVRS------------------YAATHRVRNTMAFATHKFFFERGFQYVHTPLITASDCEGAGEMFAVTTQL---PKDHSKKGKI-------DVDYSK-------DFFGKPAGLTVSGQLNVETHACGLSDCYTFGPTFRAEDSHTSRHLAEFWMIEPEICFADLKDDADLAEDYLKFCVHSALTECGDELELLEKIPNGDSMLRERLQGIVEKPFARKTYTECIKILLAEVAKGAVK 631
BLAST of mRNA_H-elongata_contig12140.1638.1 vs. uniprot
Match: A0A7S2R1X4_9STRA (Asparagine--tRNA ligase (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R1X4_9STRA) HSP 1 Score: 404 bits (1039), Expect = 4.210e-128 Identity = 267/684 (39.04%), Postives = 373/684 (54.53%), Query Frame = 1
Query: 10 IQLQPKFGLSQGEIEAACPAARGVVLRVSRPSPASTVMVAQSNAILRALAEAAPESLLRGRTEFESAQVDQWLETCWMEFEVPLKALSAASTNQSVIAEAKRNLISFLEVANARLSTSTLLVGQRTTIADVAVACAAQDAIESSGAGVIIFGPKDLSG--LPHLLRWYQTVIRHPAFASPSCPPPDDVRGTPASAALDQNNIGGAKPQKKDVAAAPASTSRGFLSNANGDAGYGDAAEKPLPVIGEGGDLLSSAAVVQGARTLALAPARFRRKRVRVRELLAS-GTVLVGQKAVVKGWLRTARAASKGKLLFLVVDDGSCSET---VVVSREAPGFDAVANCGGVGASVSVLGEVVASKGKGQEVEIKAEEVEVLGCVY--EPDGT-VGASTYPLAKKAHSLEFLRTIAHLRPRTKASKRETGRTAMHLTPNSIMHSAAMRVRHAMAFATHKFFNDRGFLYIHTPIVTGADCEGAGEQFAVSTLLA----------------EGEKIGSS--------------NGEVVPVTSTGAVDYSKAGLFGLLDFFARRTCLTVSGQLNVETHACALGDVYTFGPTFRAENSHTSRHLAEFWMIEPEVAFADLKDDIDLAEDYLKYLVAYALAHCQGDLEYFESCPGGEPGLRKRLQNVLENDFVRMTYTELVELVRKDAKEGKVRIGI 1944
+ LQ + ++ ++ A P ++G+VL + + S A+++ALA AP S + G++ ESA +D W++ E+PL+A S + K ++ + V + +L+ ST +VG TIAD+++ CA A ++ P + L + +WY +V R F S D A +D ++ G P PV+ + ++R R+RV+E+LA+ G +G+ V GW RT R A+KG LLF+ ++DGS ++ ++ S + G++ GG G+S + G +VAS+G GQ VE+KA+ ++LG VY + +GT VG YP++KKAH+LE +RT AHLRPR + +H+AAMRVRHAMAFATHKFFND GFLYIHTPI+T ADCEGAGEQF V+TLL E +K+ + + +++ GAVDYS DFF +R LTVSGQLNVETHACAL DVYTFGPTFRAENSHT+RHL+EFWMIEPE+AFA+L+DDI+LAEDYLKY V YAL C DLE+FE+ P GE GLR RL+NVL+N F R+TYTE +E++ K KE V+ +
Sbjct: 44 LSLQKEVVVTNEDLLALSPISKGLVLSILDGHIGGS-----SAAMMKALASLAPGSGIAGQSLLESANIDSWIQYGATSIEIPLEASSEV--------DVKDDIAKAIAVLSTKLADSTYMVGDSITIADISLCCALYKAASDK-----LWNPSSIDDEKLTIVGQWYGSVTRQDFFISALHALKSDGEVL-AGNTVDVSSFNGVAP----------------------------------PVVNK----------------------LYKRNRIRVKEVLANDGANFMGKTVTVAGWTRTTRNANKGLLLFIELNDGSTGQSLQCILESDKTEGYEESKLSGGAGSSFQITGTIVASQGDGQSVELKADTSKLLGAVYGGDAEGTKVGGMLYPMSKKAHTLEHMRTHAHLRPRAR------------------LHAAAMRVRHAMAFATHKFFNDNGFLYIHTPILTCADCEGAGEQFGVTTLLGADHNQPGVDLPLHEKPEEKKLSNKELKRLAKKAAKDAESNKLIEEKVPGAVDYSG-------DFFGKRANLTVSGQLNVETHACALSDVYTFGPTFRAENSHTTRHLSEFWMIEPEIAFANLEDDINLAEDYLKYCVQYALDMCADDLEFFENSPFGEAGLRDRLKNVLDNPFKRLTYTEAIEILIKAYKEDGVKFEV 627
BLAST of mRNA_H-elongata_contig12140.1638.1 vs. uniprot
Match: A0A7S1DE08_CYCTE (Asparagine--tRNA ligase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DE08_CYCTE) HSP 1 Score: 400 bits (1029), Expect = 3.090e-127 Identity = 254/642 (39.56%), Postives = 361/642 (56.23%), Query Frame = 1
Query: 118 VMVAQSNAILRALAEAAPESLLRGRTEFESAQVDQWLETCWMEFEVPLKALSAASTNQSVIAEAKRNLISFLEVANARLSTSTLLVGQRTTIADVAVACAAQDAIESSGAGVIIFGPKDLSGLPHLLRWYQTVIRHPAFASPSCPPPDDVRGTPASAALDQNNIGGAKPQKKDVAAAPASTSRGFLSNANGDAGYGDAAEKPLPVIGEGGDLLSSAAVVQGARTLALAPARFRRKRVRVRELLAS-GTVLVGQKAVVKGWLRTARAASKGKLLFLVVDDGSCSETVVVSREAPGFDAVANC---GGVGASVSVLGEVVASKGKGQEVEIKAEEVEVLGCVY--EPDGT-VGASTYPLAKKAHSLEFLRTIAHLRPRTKASKRETGRTAMHLTPNSIMHSAAMRVRHAMAFATHKFFNDRGFLYIHTPIVTGADCEGAGEQFAVSTLLA-----------------EGEK---------------IGSSNGEVVPVTSTGAVDYSKAGLFGLLDFFARRTCLTVSGQLNVETHACALGDVYTFGPTFRAENSHTSRHLAEFWMIEPEVAFADLKDDIDLAEDYLKYLVAYALAHCQGDLEYFESCPGGEPGLRKRLQNVLENDFVRMTYTELVELVRKDAKEG 1926
V + S+A++R +A AP + + G ++ + A V+ W+ W + P++AL + + + +I+ L L T +VG T+AD+++ + + A+++ ++ PK+ + L R+YQT+I P F + A+ K +A + S+G S+++G + A P PV+ + +RR R+R++E+LA+ G + Q V GW RT R A+KG+LLF+ ++DGS ++ +A + A C GG G+S+ ++G++++S GQ VE++ ++LG VY +GT VG YP++KKAH+LEF+R +AHLRPR GR +H+AAMRVRHAMA+ATH FF++ GFLYIHTPI+T ADCEGAGEQFAV+T+L E EK G + V GAVDY+ DFFARR LTVSGQLNVETHACAL DVYTFGPTFRAENSHT RHL+EFWMIEPE+AFADL DDI+LAEDYLKY V +AL +C DLE+FE+ P GE GLR RL+NVL+N F R+TYTE +E+++K ++G
Sbjct: 3 VKIGGSDAMMRTIASLAPATKVAGGSDVDKALVEGWMSFVWASLDAPMEALQQINDQVTT-----KGVIAALGTLECHLHYQTYMVGHSITLADISLVVSLRSAVDAK-----LWEPKEGTNLE---RYYQTMIHQPFFQT-------------------------AEKCMKSTSAPVGAPSKGSSSSSSGSGVLLNGA--PTPVVNK----------------------MYRRHRIRIKEILANDGASYMDQTVTVAGWTRTTRNANKGQLLFVELNDGSVGTSLQCVLDATTTEGFAECKASGGTGSSLQLVGKLISSPAAGQSVELQVTSGKLLGAVYGGNHEGTEVGGMLYPMSKKAHTLEFMRDVAHLRPR--------GR----------LHAAAMRVRHAMAYATHNFFHNHGFLYIHTPIITCADCEGAGEQFAVTTMLGNEPTETGITLPLNEPPKEEEKKMSKKEMKRLKKKAGAGKDPNKPEEVKVVGAVDYTN-------DFFARRANLTVSGQLNVETHACALSDVYTFGPTFRAENSHTGRHLSEFWMIEPEIAFADLTDDINLAEDYLKYCVQFALDNCADDLEFFENNPHGEVGLRARLRNVLDNPFKRLTYTEAIEILQKAVEDG 557
BLAST of mRNA_H-elongata_contig12140.1638.1 vs. uniprot
Match: A0A7S2WSY6_9STRA (Asparagine--tRNA ligase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSY6_9STRA) HSP 1 Score: 384 bits (985), Expect = 5.380e-123 Identity = 211/386 (54.66%), Postives = 261/386 (67.62%), Query Frame = 1
Query: 799 APA-RFRRKRVRVRELLASGTVLVGQKAVVKGWLRTARAASKGKLLFLVVDDGSCSETV--VVSREAPGFDAVAN--CGGVGASVSVLGEVVASKGKGQEVEIKAEEVEVLGCVYEPDGT-VGASTYPLAK--KAHSLEFLRTIAHLRPRTKASKRETGRTAMHLTPNSIMHSAAMRVRHAMAFATHKFFNDRGFLYIHTPIVTGADCEGAGEQFAVSTLLAEGEKIGSSNGEVVPVTSTGAVDYSKAGLFGLLDFFARRTCLTVSGQLNVETHACALGDVYTFGPTFRAENSHTSRHLAEFWMIEPEVAFADLKDDIDLAEDYLKYLVAYALAHCQGDLEYFESCPGGEPGLRKRLQNVLENDFVRMTYTELVELVRKDAKEGKV 1932
APA RF+RKR+R+ EL+ GT LVG+ VV+GW +T R A KG +LF+ + DGS S V VV GF+A CGG AS S+ G+VV S+G GQ +E++A +VEVLG V+ DG G YPLA+ K HS EFLR++AHLRPRT+A +A RVR AMA+ATH+FFN+RGFLYIHTP++TGADCEGAGE F+V+TL+ + + E +P T GA+D+SK DFF +T LTVSGQLNVETH C+L DVYTFGPTFRAENSHTSRHLAEFWMIEPE+AFA L+DD+DLAEDYLK+ V YAL C DL E P + LR RL N+LE F R+TYTE + ++ K+ GKV
Sbjct: 24 APAMRFKRKRIRIAELMQLGTTLVGKTVVVQGWAKTIREAGKGSILFIQLSDGSSSGDVQVVVDAGVEGFEAARPNVCGGTDASFSISGKVVESQGAGQSIELQAVKVEVLGQVFAGDGDQAGGKFYPLARNRKGHSFEFLRSVAHLRPRTRAF------------------AAVQRVRSAMAYATHQFFNERGFLYIHTPLITGADCEGAGEMFSVTTLIKDPK-------EPLPTTKDGAIDFSK-------DFFGAQTGLTVSGQLNVETHCCSLSDVYTFGPTFRAENSHTSRHLAEFWMIEPEIAFAQLEDDMDLAEDYLKHCVHYALTVCGEDLAALEKVPSWDSELRSRLMNILERPFTRLTYTEAISILEKEVASGKV 377
BLAST of mRNA_H-elongata_contig12140.1638.1 vs. uniprot
Match: A0A1E7ERJ5_9STRA (Asparagine--tRNA ligase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ERJ5_9STRA) HSP 1 Score: 381 bits (978), Expect = 5.460e-122 Identity = 213/393 (54.20%), Postives = 271/393 (68.96%), Query Frame = 1
Query: 811 FRRKRVRVRELLAS-GTVLVGQKAVVKGWLRTARAASKGKLLFLVVDDGSCSET---VVVSREAPGFDAVANCGGVGASVSVLGEVVASKGKGQEVEIKAEEVEVLGCVY--EPDGT-VGASTYPLAKKAHSLEFLRTIAHLRPRTKASKRETGRTAMHLTPNSIMHSAAMRVRHAMAFATHKFFNDRGFLYIHTPIVTGADCEGAGEQFAVSTLLAEGEKIGSSNGEV---VPVTST--------GAVDYSKAGLFGLLDFFARRTCLTVSGQLNVETHACALGDVYTFGPTFRAENSHTSRHLAEFWMIEPEVAFADLKDDIDLAEDYLKYLVAYALAHCQGDLEYFESCPGGEPGLRKRLQNVLENDFVRMTYTELVELVRKDAKEGKVR 1935
+RR RVRV+E++A+ GT + + V GW RT R A+KG+LLF+ ++DGS E+ V+ S + GFD N GG GAS ++G ++AS+G GQ VE+ ++LG VY +GT +G + YP++KKAH+LE +R AHLR R GR +H+AAMR+RH MA+ATH FF++ GFLYIHTPI+TGADCEGAGEQF V+TLL GS + E +P+ T GAVDYSK DFF +R LTVSGQLNVETHACAL DVYTFGPTFRAENSHT RHLAEFWMIEPE+ FADL DDI+LAEDYLKY V +AL +C DLE+FE+ P GE GLR RL+NVL+N F R+TYTE +++++K K+G V+
Sbjct: 14 YRRHRVRVKEVMANEGTQFLDKTITVAGWARTTRNANKGQLLFVEINDGSSGESIQCVLDSEKTEGFDECKNSGGTGASFQMVGTLIASQGDGQAVELAVTTGKLLGAVYGGNIEGTEIGGALYPMSKKAHTLEHMREHAHLRAR--------GR----------VHAAAMRIRHCMAYATHTFFHNHGFLYIHTPILTGADCEGAGEQFGVTTLL------GSDHLETDVTIPIDPTKPVNETVVGAVDYSK-------DFFGKRVNLTVSGQLNVETHACALSDVYTFGPTFRAENSHTGRHLAEFWMIEPEICFADLSDDINLAEDYLKYCVKFALENCAEDLEFFENSPHGEVGLRDRLKNVLDNPFQRLTYTEAIKVLQKAEKDGDVK 375
BLAST of mRNA_H-elongata_contig12140.1638.1 vs. uniprot
Match: H3G8N3_PHYRM (Asparagine--tRNA ligase n=19 Tax=Peronosporaceae TaxID=4777 RepID=H3G8N3_PHYRM) HSP 1 Score: 375 bits (962), Expect = 7.210e-120 Identity = 222/396 (56.06%), Postives = 263/396 (66.41%), Query Frame = 1
Query: 766 AVVQGARTLALAPARFRRKRVRVRELLASGTVLVGQKAVVKGWLRTARAASKGKLLFLVVDDGSCS---ETVVVSREAPGFDAVANCGGVGASVSVLGEVVASKGKGQEVEIKAEEVEVLGCVYEPDGTVGASTYPLAKKAHSLEFLRTIAHLRPRTKASKRETGRTAMHLTPNSIMHSAAMRVRHAMAFATHKFFNDRGFLYIHTPIVTGADCEGAGEQFAVSTLLAEGEKIGSSNGEVVPVTSTGAVDYSKAGLFGLLDFFARRTCLTVSGQLNVETHACALGDVYTFGPTFRAENSHTSRHLAEFWMIEPEVAFADLKDDIDLAEDYLKYLVAYALAHCQGDLEYFESCPGGEPGLRKRLQNVLENDFVRMTYTELVELVRKDA--KEGKVRI 1938
AVV A+ AP FRR R+RV+ELL SG L GQ VKGW +T R A G FL ++DGSC + V+ E GF A GGVGAS SV G VV S KGQEVE+KA +V V G + PD ++TYP++KK H+LE LR AHLRPR S +H AAMRVR+AMAFATH+FFN RGFLYIHTPI+T +DCEGAGE F V+TLL++ +G++ P+T VDYSK DFF R + L+VSGQLNVETH CAL DVYTFGPTFRAENS+TSRHLAEFWMIEPE+AFADLKDDIDLAEDYLKY V YAL HC DLE+F E GL +RL +E+ FVR+TYT+ VEL+ K K+GK +
Sbjct: 3 AVVPSAKPTT-APTLFRRNRIRVKELLQSGLELEGQTVTVKGWAKTLREAGAGAFAFLELNDGSCFAGVQCVINKEETEGFAAAIASGGVGASFSVEGVVVKSPAKGQEVELKAAKVMVYGGI--PD----SATYPMSKKRHTLEHLRAHAHLRPR------------------SNIHGAAMRVRNAMAFATHEFFNQRGFLYIHTPIITESDCEGAGEMFGVTTLLSQ-----HPDGKL-PLTKENKVDYSK-------DFFDRPSYLSVSGQLNVETHCCALSDVYTFGPTFRAENSNTSRHLAEFWMIEPEIAFADLKDDIDLAEDYLKYCVQYALDHCTEDLEFFNK--NVEKGLLERLAATVESPFVRITYTDAVELLLKPEHLKKGKFSV 358 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12140.1638.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig12140.1638.1 >prot_H-elongata_contig12140.1638.1 ID=prot_H-elongata_contig12140.1638.1|Name=mRNA_H-elongata_contig12140.1638.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=648bp LAGIQLQPKFGLSQGEIEAACPAARGVVLRVSRPSPASTVMVAQSNAILRback to top mRNA from alignment at H-elongata_contig12140:1456..7935+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig12140.1638.1 ID=mRNA_H-elongata_contig12140.1638.1|Name=mRNA_H-elongata_contig12140.1638.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6480bp|location=Sequence derived from alignment at H-elongata_contig12140:1456..7935+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig12140:1456..7935+ >mRNA_H-elongata_contig12140.1638.1 ID=mRNA_H-elongata_contig12140.1638.1|Name=mRNA_H-elongata_contig12140.1638.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3888bp|location=Sequence derived from alignment at H-elongata_contig12140:1456..7935+ (Himanthalia elongata Himel1 dioecious)back to top |