mRNA_H-elongata_contig8853.16377.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig8853.16377.1 vs. uniprot
Match: A0A5S9INE9_9BACT (NADAR domain-containing protein n=1 Tax=Candidatus Uabimicrobium amorphum TaxID=2596890 RepID=A0A5S9INE9_9BACT) HSP 1 Score: 136 bits (343), Expect = 1.070e-37 Identity = 73/166 (43.98%), Postives = 98/166 (59.04%), Query Frame = 1
Query: 1 YDKSSTYICDDVVLFWQPPSIIPKWTPSRFVVDLVEYKYAEKFMMGSKARLLGDEMALSAILDTDDPREQKRLGCQVRRFNSDTWQKECEYIVLRGNIAKYSQNEEMRIALAYTSDRGLAEASLHDKMWGIGLRVSDPRASTPDTRYRKKLLGQTLEHVRNILRQE 498
+D + + D VLFW+PP +WT S F VD V Y AE++MM KARL DE I+++D PREQK+LG +VR F TW +E IV RGN+AK+SQN +++ AL T +R L EAS DK+WGIG + A LLG+ L+ VR L+ +
Sbjct: 18 FDGTQVVVSDSFVLFWKPPCAFGQWTLSPFEVDGVHYNCAEQYMMAEKARLFQDEKNEKLIMESDCPREQKKLGKRVRGFKEKTWLEERFAIVFRGNMAKFSQNLDLKQALLETENRTLVEASPLDKIWGIGFAANQEEAYDETKWNGLNLLGKVLQEVRQELQSD 183
BLAST of mRNA_H-elongata_contig8853.16377.1 vs. uniprot
Match: UPI00148A748D (uncharacterized protein LOC105329780 isoform X1 n=3 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A748D) HSP 1 Score: 139 bits (349), Expect = 8.050e-36 Identity = 73/165 (44.24%), Postives = 99/165 (60.00%), Query Frame = 1
Query: 4 DKSSTYICDDVVLFWQPPSIIPKWTPSRFVVDLVEYKYAEKFMMGSKARLLGDEMALSAILDTDDPREQKRLGCQVRRFNSDTWQKECEYIVLRGNIAKYSQNEEMRIALAYTSDRGLAEASLHDKMWGIGLRVSDPRASTPDTRYRKKLLGQTLEHVRNILRQE 498
+K S D FWQ S+ +W PS+FVVD VEY AE++MM KA L+ D I+ D P E K+ G V+ F+ W + C IV +GNIAK+SQN+++++ L T + L EAS +DK+WGIGLR +D RA T K LLG+ L VR+ LR+E
Sbjct: 318 NKQSENEKDKFEYFWQKESVFSQWYPSKFVVDGVEYSCAEQYMMQQKAILMDDMETADIIMALDAPNEMKQYGRYVKNFSQTLWDQHCTRIVEKGNIAKFSQNDDLKMTLFSTYPKTLVEASPYDKVWGIGLRQNDRRAWNKSTWLGKNLLGEILTRVRDKLREE 482
BLAST of mRNA_H-elongata_contig8853.16377.1 vs. uniprot
Match: A0A0L0DID5_THETB (NADAR domain-containing protein n=2 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DID5_THETB) HSP 1 Score: 129 bits (323), Expect = 1.000e-34 Identity = 72/162 (44.44%), Postives = 94/162 (58.02%), Query Frame = 1
Query: 4 DKSSTYICDDVVLFWQPPSIIPKWTPSRFVVDLVEYKYAEKFMMGSKARLLGDEMALSAILDTDDPREQKRLGCQVRRFNSDTWQKECEYIVLRGNIAKYSQNEEMRIALAYTSDRGLAEASLHDKMWGIGLRVSDPRASTPDTRYRKKLLGQTLEHVRNIL 489
+ + D +VLFW+ + +W P F VD V Y AE++MM KARL GD+ L AIL PR+ K LG VR F+ W+ EC IV GN+AK+SQ+EE+ AL T R +AEAS +DK+WGIGL +D RA + LLG+ L VR L
Sbjct: 13 ESRDVVMTDSLVLFWK--GFLSQWYPCEFEVDGVVYANAEQYMMAGKARLFGDDEMLEAILAETSPRKIKGLGRCVRNFDDKVWKAECLAIVEAGNVAKFSQSEELAAALLATGTRTIAEASPYDKIWGIGLAPNDRRALSRKNWRGSNLLGKALMAVRRQL 172
BLAST of mRNA_H-elongata_contig8853.16377.1 vs. uniprot
Match: A0A0F9K6M9_9ZZZZ (NADAR domain-containing protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9K6M9_9ZZZZ) HSP 1 Score: 126 bits (316), Expect = 7.630e-34 Identity = 67/161 (41.61%), Postives = 96/161 (59.63%), Query Frame = 1
Query: 22 ICDDVVLFWQPPSIIPKWTPSRFVVDLVEYKYAEKFMMGSKARLLGDEMALSAILDTDDPREQKRLGCQVRRFNSDTWQKECEYIVLRGNIAKYSQNEEMRIALAYTSDRGLAEASLHDKMWGIGLRVSDPRASTPDTRYRKKLLGQTLEHVR-NILRQEN 501
+ DD VLFW P +W +F VD EY E++MM KA DE + I+ TD P+ QK +G V+ F+ + W+ CE IV +GN AK++QN+ ++ + T DR L EAS +DK+WGIGL +DP+A P + LLG +L +VR +I+ EN
Sbjct: 7 VTDDFVLFWHGP--FSQWYSCQFTVDGTEYNCTEQYMMAKKALFFEDEQSWLKIMATDSPKIQKAVGRTVKNFDLEKWKDVCEEIVYKGNYAKFTQNDYLKSVILGTKDRTLVEASPYDKIWGIGLSETDPKALCPASWQGLNLLGISLMNVRESIISYEN 165
BLAST of mRNA_H-elongata_contig8853.16377.1 vs. uniprot
Match: A0A495QTY0_9ACTN (NADAR domain-containing protein n=3 Tax=Actinomadura TaxID=1988 RepID=A0A495QTY0_9ACTN) HSP 1 Score: 125 bits (314), Expect = 1.980e-33 Identity = 69/157 (43.95%), Postives = 92/157 (58.60%), Query Frame = 1
Query: 31 DVVLFWQPPSIIP----KWTPSRFVVDLVEYKYAEKFMMGSKARLLGDEMALSAILDTDDPREQKRLGCQVRRFNSDTWQKECEYIVLRGNIAKYSQNEEMRIALAYTSDRGLAEASLHDKMWGIGLRVSDPRASTPDTRYRKKLLGQTLEHVRNIL 489
+ + FW +I P +W PS F VD Y AE +MM KARL GDE + +AI+ + DP + K+LG +VR F+ TW+ IV +GN+AK+SQ++E+R L T DR L EAS D++WGIGL V DPRA + LLG L R L
Sbjct: 17 EFLFFWGHKNIDPGCLSQWWPSPFTVDGTTYATAEHYMMAEKARLFGDEKSAAAIVASSDPSQAKKLGRRVRNFDEQTWRDNRLAIVTKGNVAKFSQDDELRDYLLGTRDRVLVEASPVDRIWGIGLGVDDPRAEQVSAWRGQNLLGFALMSARESL 173
BLAST of mRNA_H-elongata_contig8853.16377.1 vs. uniprot
Match: A0A1X7UIZ4_AMPQE (NADAR domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UIZ4_AMPQE) HSP 1 Score: 125 bits (314), Expect = 2.150e-33 Identity = 64/146 (43.84%), Postives = 86/146 (58.90%), Query Frame = 1
Query: 43 FWQPPSIIPKWTPSRFVVDLVEYKYAEKFMMGSKARLLGDEMALSAILDTDDPREQKRLGCQVRRFNSDTWQKECEYIVLRGNIAKYSQNEEMRIALAYTSDRGLAEASLHDKMWGIGLRVSDPRASTPDTRYRKKLLGQTLEHVR 480
FWQ S +W PS F +D + + E++MM KA L GD+ A ILDT +PREQK +G VR F+ W++ C IV RGN AK++QNE+++ L T L EAS D++WGIGL S+P+A T LGQ + VR
Sbjct: 20 FWQSQSPFSQWHPSEFKIDGITFCCCEQYMMYQKAILFGDDEAAQKILDTSEPREQKAIGRTVRNFDDKVWKENCRDIVKRGNKAKFTQNEDLKEKLMSTIGTTLVEASPRDRIWGIGLGASNPKALNRKTWRGTNWLGQAITEVR 165
BLAST of mRNA_H-elongata_contig8853.16377.1 vs. uniprot
Match: A0A429G873_9ACTN (DUF1768 domain-containing protein n=3 Tax=Actinomadura TaxID=1988 RepID=A0A429G873_9ACTN) HSP 1 Score: 125 bits (315), Expect = 2.370e-33 Identity = 69/154 (44.81%), Postives = 91/154 (59.09%), Query Frame = 1
Query: 37 VLFWQ---PPSIIPKWTPSRFVVDLVEYKYAEKFMMGSKARLLGDEMALSAILDTDDPREQKRLGCQVRRFNSDTWQKECEYIVLRGNIAKYSQNEEMRIALAYTSDRGLAEASLHDKMWGIGLRVSDPRASTPDTRYRKKLLGQTLEHVRNIL 489
+ FW+ P + +W S F VD V Y AE +MM KARL GDE A++AI D P K LG +V F W++ IV+RGN+AK++Q++++R L T DR LAEAS D++WGIGL DPRA PD + LLG+ L VR L
Sbjct: 40 LFFWREHGPAGCLSQWHASPFTVDGVRYATAEHYMMAEKARLFGDERAVAAITDAPHPGRAKDLGRRVAAFEEAVWREHRLGIVVRGNLAKFAQHDDLRAYLLGTRDRILAEASPLDRIWGIGLTAGDPRAERPDAWRGENLLGRALMAVRASL 193
BLAST of mRNA_H-elongata_contig8853.16377.1 vs. uniprot
Match: K1R4Q0_CRAGI (Phosphopyruvate hydratase n=1 Tax=Crassostrea gigas TaxID=29159 RepID=K1R4Q0_CRAGI) HSP 1 Score: 134 bits (337), Expect = 2.440e-33 Identity = 68/152 (44.74%), Postives = 94/152 (61.84%), Query Frame = 1
Query: 43 FWQPPSIIPKWTPSRFVVDLVEYKYAEKFMMGSKARLLGDEMALSAILDTDDPREQKRLGCQVRRFNSDTWQKECEYIVLRGNIAKYSQNEEMRIALAYTSDRGLAEASLHDKMWGIGLRVSDPRASTPDTRYRKKLLGQTLEHVRNILRQE 498
FWQ S+ +W P FV+D + Y AE++MM KA ++GDE + AI+ DDP E K+ G V+ FN D W + IV RGN+ K+SQNEE++ L +T + L EAS +D++WGIGL DP+A T K LLG+ L VR LR++
Sbjct: 705 FWQKHSVFSQWYPCTFVIDGITYNCAEQYMMHQKAEIMGDEDSAKAIMTLDDPSEIKKRGRYVKNFNQDIWGACSQEIVKRGNMEKFSQNEELKQQLLWTHPKTLVEASPYDQIWGIGLSEDDPKAWNKLTWRGKNLLGEILTTVREKLRRD 856
BLAST of mRNA_H-elongata_contig8853.16377.1 vs. uniprot
Match: D7FMJ5_ECTSI (NADAR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMJ5_ECTSI) HSP 1 Score: 130 bits (327), Expect = 3.150e-33 Identity = 67/159 (42.14%), Postives = 93/159 (58.49%), Query Frame = 1
Query: 22 ICDDVVLFWQPPSIIPKWTPSRFVVDLVEYKYAEKFMMGSKARLLGDEMALSAILDTDDPREQKRLGCQVRRFNSDTWQKECEYIVLRGNIAKYSQNEEMRIALAYTSDRGLAEASLHDKMWGIGLRVSDPRASTPDTRYRKKLLGQTLEHVRNILRQE 498
+ D +VLFW PP + +W P+ F VD V+Y AE++MM KA + GD + I+ T DP +QKRLG +V ++ W VL GN +K++QN M L T D+ LAEAS HDK+WGIG+ DP + + LLG+ L +VRN +R E
Sbjct: 132 VTDTMVLFWNPPCVFTQWEPALFEVDGVKYCSAEQYMMACKANVFGDTDIWNKIMSTSDPAQQKRLGKEVANYDHGIWNLCKVQFVLTGNYSKFTQNPGMCDQLLATGDKMLAEASQHDKVWGIGMDAFDPNVERHECWRGQNLLGKILMYVRNKIRWE 290
BLAST of mRNA_H-elongata_contig8853.16377.1 vs. uniprot
Match: UPI00178ACF33 (NADAR family protein n=1 Tax=Actinomadura algeriensis TaxID=1679523 RepID=UPI00178ACF33) HSP 1 Score: 123 bits (309), Expect = 1.060e-32 Identity = 67/154 (43.51%), Postives = 92/154 (59.74%), Query Frame = 1
Query: 37 VLFWQPPSI---IPKWTPSRFVVDLVEYKYAEKFMMGSKARLLGDEMALSAILDTDDPREQKRLGCQVRRFNSDTWQKECEYIVLRGNIAKYSQNEEMRIALAYTSDRGLAEASLHDKMWGIGLRVSDPRASTPDTRYRKKLLGQTLEHVRNIL 489
V FW+ + + +W S F VD V Y AE +MM KARL GDE A +A++ P K LG +V F+ TW++ IV+RGN+AK++Q++++R L T R LAEAS D++WGIGL DPRA PD + LLG+ L VR+ L
Sbjct: 19 VFFWREHGLTGCLSQWHASPFTVDGVRYATAEHYMMAEKARLFGDERAAAAVIAAPHPGRAKDLGRRVTGFDESTWREHRLDIVVRGNLAKFAQHDDLRAYLVGTRRRILAEASPRDRVWGIGLTADDPRAERPDAWRGENLLGRALMTVRDRL 172 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8853.16377.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig8853.16377.1 >prot_H-elongata_contig8853.16377.1 ID=prot_H-elongata_contig8853.16377.1|Name=mRNA_H-elongata_contig8853.16377.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=167bp YDKSSTYICDDVVLFWQPPSIIPKWTPSRFVVDLVEYKYAEKFMMGSKARback to top mRNA from alignment at H-elongata_contig8853:2693..3193- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig8853.16377.1 ID=mRNA_H-elongata_contig8853.16377.1|Name=mRNA_H-elongata_contig8853.16377.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=501bp|location=Sequence derived from alignment at H-elongata_contig8853:2693..3193- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig8853:2693..3193- >mRNA_H-elongata_contig8853.16377.1 ID=mRNA_H-elongata_contig8853.16377.1|Name=mRNA_H-elongata_contig8853.16377.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1002bp|location=Sequence derived from alignment at H-elongata_contig8853:2693..3193- (Himanthalia elongata Himel1 dioecious)back to top |