prot_H-elongata_contig88493.16372.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig88493.16372.1
Unique Nameprot_H-elongata_contig88493.16372.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length126
Homology
BLAST of mRNA_H-elongata_contig88493.16372.1 vs. uniprot
Match: D7FW39_ECTSI (Sec23/sec24 transport protein-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW39_ECTSI)

HSP 1 Score: 187 bits (474), Expect = 1.870e-52
Identity = 87/125 (69.60%), Postives = 99/125 (79.20%), Query Frame = 0
Query:    2 GEGGPIRCEKCRAYMNSVVKFSQNGEKWVCDFCKHEGPVPQSYQCPLDSSGLRRDRQQRAELSRGSVDFAVPKVSRNPTSTSTSPAVFSVRPEQQPIFVFCVDASPRALETGFTMACLLAVNAAL 126
            GE GP+RCE CRAY+NS  K+ QNGEKW+C+FCKHEGPVP +YQCPLD +GLRRDR QRAEL RGSVDF VPK            AV+S+RPEQQPIFVFCVD SPRALETGF+ ACL A+ A+L
Sbjct:  393 GEAGPLRCEMCRAYINSFAKYVQNGEKWICNFCKHEGPVPHAYQCPLDGAGLRRDRDQRAELCRGSVDFVVPK------------AVYSLRPEQQPIFVFCVDVSPRALETGFSAACLAAIEASL 505          
BLAST of mRNA_H-elongata_contig88493.16372.1 vs. uniprot
Match: A0A6H5JV89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV89_9PHAE)

HSP 1 Score: 142 bits (357), Expect = 1.100e-36
Identity = 68/98 (69.39%), Postives = 77/98 (78.57%), Query Frame = 0
Query:   29 WVCDFCKHEGPVPQSYQCPLDSSGLRRDRQQRAELSRGSVDFAVPKVSRNPTSTSTSPAVFSVRPEQQPIFVFCVDASPRALETGFTMACLLAVNAAL 126
            W+C+FCKHEGPVP +YQCPLD +GLRRDR QRAEL RGSVDF VPK            AV+S+RPEQQPIFVFCVD SPRALETGF+ ACL A+ A+L
Sbjct:  358 WICNFCKHEGPVPHAYQCPLDGAGLRRDRDQRAELCRGSVDFVVPK------------AVYSLRPEQQPIFVFCVDVSPRALETGFSAACLAAIEASL 443          
BLAST of mRNA_H-elongata_contig88493.16372.1 vs. uniprot
Match: A0A5D6XUW0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XUW0_9STRA)

HSP 1 Score: 110 bits (276), Expect = 9.090e-26
Identity = 55/122 (45.08%), Postives = 72/122 (59.02%), Query Frame = 0
Query:    2 GEGGPIRCEKCRAYMNSVVKFSQNGEKWVCDFCKHEGPVPQSYQCPLDSSGLRRDRQQRAELSRGSVDFAVPKVSRNPTSTSTSPAVFSVRPEQQPIFVFCVDASPRALETGFTMACLLAVN 123
            G  GP+RC +CRAY+NS  KF Q G K+VC+ C      P+ Y C +D +G RRD Q+RAELSRGSVD+ VP               ++VRP Q+PIFVF +D S  A +T    A L ++ 
Sbjct:  451 GPNGPLRCTRCRAYVNSFTKFIQGGRKFVCNICTLSNETPRDYYCSVDQNGRRRDVQERAELSRGSVDYVVP-------------VEYTVRPPQEPIFVFVLDVSLFAFQTHLVAAALESIK 559          
BLAST of mRNA_H-elongata_contig88493.16372.1 vs. uniprot
Match: A0A8K1CS08_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CS08_PYTOL)

HSP 1 Score: 110 bits (276), Expect = 9.100e-26
Identity = 54/122 (44.26%), Postives = 73/122 (59.84%), Query Frame = 0
Query:    2 GEGGPIRCEKCRAYMNSVVKFSQNGEKWVCDFCKHEGPVPQSYQCPLDSSGLRRDRQQRAELSRGSVDFAVPKVSRNPTSTSTSPAVFSVRPEQQPIFVFCVDASPRALETGFTMACLLAVN 123
            G  GP+RC +CRAY+NS  KF Q G+K+VC+ C      P+ Y C +D +G RRD Q+RAEL RGSVD+ VP             A +++RP Q+PIFVF +D S  + +T    A L A+ 
Sbjct:  467 GPNGPLRCTRCRAYVNSYTKFIQGGKKFVCNICALSNETPRDYYCSVDQNGRRRDVQERAELCRGSVDYVVP-------------AAYTLRPPQEPIFVFVLDVSLFSFQTSLAQATLDAIK 575          
BLAST of mRNA_H-elongata_contig88493.16372.1 vs. uniprot
Match: K3W624_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W624_GLOUD)

HSP 1 Score: 110 bits (274), Expect = 1.640e-25
Identity = 54/122 (44.26%), Postives = 73/122 (59.84%), Query Frame = 0
Query:    2 GEGGPIRCEKCRAYMNSVVKFSQNGEKWVCDFCKHEGPVPQSYQCPLDSSGLRRDRQQRAELSRGSVDFAVPKVSRNPTSTSTSPAVFSVRPEQQPIFVFCVDASPRALETGFTMACLLAVN 123
            G  GP+RC +CRAY++S  KF Q G K+VC+ C      P+ Y C +D +G RRD Q+RAELSRGSVD+ VP             A ++VRP Q+PIFVF +D S  + +T    + L A+ 
Sbjct:   66 GPTGPLRCTRCRAYVSSFTKFIQGGRKFVCNICTLSNETPRDYYCSVDQNGRRRDVQERAELSRGSVDYVVP-------------AAYTVRPPQEPIFVFVLDVSLFSFQTNLATSALNAIK 174          
BLAST of mRNA_H-elongata_contig88493.16372.1 vs. uniprot
Match: A0A836CEE0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEE0_9STRA)

HSP 1 Score: 110 bits (274), Expect = 1.660e-25
Identity = 58/126 (46.03%), Postives = 73/126 (57.94%), Query Frame = 0
Query:    2 GEGGPIRCEKCRAYMNSVVKFSQNGEKWVCDFCKHE-GPVPQSYQCPLDSSGLRRDRQQRAELSRGSVDFAVPKVSRNPTSTSTSPAVFSVRPEQQPIFVFCVDASPRALETGFTMACLLAVNAAL 126
            G  GP RC  CRAY+N+  +F+  G +W C+ C      V  +Y+C LD +GLRRDR  RAEL RGSVDFAVP             A ++VRP QQP++ F +DAS  A  +GFT A   A   AL
Sbjct:  460 GAAGPPRCRICRAYINAYARFAAGGAQWACNLCGGALNDVDPAYRCALDGAGLRRDRAARAELCRGSVDFAVP-------------AEYAVRPAQQPVYAFVIDASAAARASGFTAAAAAAAELAL 572          
BLAST of mRNA_H-elongata_contig88493.16372.1 vs. uniprot
Match: A0A2D4BTL6_PYTIN (Protein transporter Sec24 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BTL6_PYTIN)

HSP 1 Score: 108 bits (269), Expect = 7.920e-25
Identity = 53/122 (43.44%), Postives = 73/122 (59.84%), Query Frame = 0
Query:    2 GEGGPIRCEKCRAYMNSVVKFSQNGEKWVCDFCKHEGPVPQSYQCPLDSSGLRRDRQQRAELSRGSVDFAVPKVSRNPTSTSTSPAVFSVRPEQQPIFVFCVDASPRALETGFTMACLLAVN 123
            G  GP+RC +CRAY+N+  +F Q G+K+VC+ C      P+ Y C +D  G RRD Q+RAELSRGSVD+ VP+              ++VRP Q+PIFVF +D S  + +T    A L A+ 
Sbjct:  381 GPTGPLRCTRCRAYVNAYTRFIQGGKKFVCNICLLNNETPRDYYCSVDQHGRRRDIQERAELSRGSVDYVVPEA-------------YTVRPPQEPIFVFVLDVSLFSFQTSLAAATLDAIK 489          
BLAST of mRNA_H-elongata_contig88493.16372.1 vs. uniprot
Match: A0A3M6VKT2_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKT2_9STRA)

HSP 1 Score: 107 bits (268), Expect = 1.070e-24
Identity = 51/122 (41.80%), Postives = 72/122 (59.02%), Query Frame = 0
Query:    2 GEGGPIRCEKCRAYMNSVVKFSQNGEKWVCDFCKHEGPVPQSYQCPLDSSGLRRDRQQRAELSRGSVDFAVPKVSRNPTSTSTSPAVFSVRPEQQPIFVFCVDASPRALETGFTMACLLAVN 123
            G  GP+RC +C AY+NS  KF Q G K+VC+ C+     P+ Y C +D  G RRD Q+RAELSRGSV++ VP             A +++RP Q+PI VF +D S  + +TG  ++ L  + 
Sbjct:  247 GPSGPLRCTRCAAYVNSFTKFIQGGRKFVCNICQLSNDTPRDYYCSVDQYGKRRDIQERAELSRGSVEYVVP-------------AAYTIRPPQEPILVFILDVSLFSFQTGLAISALQTIQ 355          
BLAST of mRNA_H-elongata_contig88493.16372.1 vs. uniprot
Match: A0A6G0RZF7_9STRA (Protein transport protein Sec24-like n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6G0RZF7_9STRA)

HSP 1 Score: 107 bits (266), Expect = 1.990e-24
Identity = 51/122 (41.80%), Postives = 71/122 (58.20%), Query Frame = 0
Query:    2 GEGGPIRCEKCRAYMNSVVKFSQNGEKWVCDFCKHEGPVPQSYQCPLDSSGLRRDRQQRAELSRGSVDFAVPKVSRNPTSTSTSPAVFSVRPEQQPIFVFCVDASPRALETGFTMACLLAVN 123
            G  GP+RC +C AY+NS  KF Q G K+VC+ C+     P+ Y C +D  G RRD Q+RAELSRGSV++ VP             A +++RP Q+PI VF +D S  + +TG   + L  + 
Sbjct:  202 GPSGPLRCTRCAAYVNSFTKFIQGGRKFVCNICQLHNETPRDYYCSVDQYGKRRDIQERAELSRGSVEYVVP-------------AAYTIRPPQEPILVFVLDVSLFSFQTGLATSALQTIQ 310          
BLAST of mRNA_H-elongata_contig88493.16372.1 vs. uniprot
Match: A0A225WSD1_9STRA (Protein transporter Sec24 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WSD1_9STRA)

HSP 1 Score: 107 bits (266), Expect = 2.010e-24
Identity = 51/122 (41.80%), Postives = 71/122 (58.20%), Query Frame = 0
Query:    2 GEGGPIRCEKCRAYMNSVVKFSQNGEKWVCDFCKHEGPVPQSYQCPLDSSGLRRDRQQRAELSRGSVDFAVPKVSRNPTSTSTSPAVFSVRPEQQPIFVFCVDASPRALETGFTMACLLAVN 123
            G  GP+RC +C AY+NS  KF Q G K+VC+ C+     P+ Y C +D  G RRD Q+RAELSRGSV++ VP             A +++RP Q+PI VF +D S  + +TG   + L  + 
Sbjct:  280 GPSGPLRCTRCAAYVNSFTKFIQGGRKFVCNICQLNNETPRDYYCSVDQYGKRRDIQERAELSRGSVEYVVP-------------AAYTIRPPQEPILVFVLDVSLFSFQTGLATSALQTIQ 388          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig88493.16372.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FW39_ECTSI1.870e-5269.60Sec23/sec24 transport protein-related n=1 Tax=Ecto... [more]
A0A6H5JV89_9PHAE1.100e-3669.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A5D6XUW0_9STRA9.090e-2645.08Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A8K1CS08_PYTOL9.100e-2644.26Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3W624_GLOUD1.640e-2544.26Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A836CEE0_9STRA1.660e-2546.03Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A2D4BTL6_PYTIN7.920e-2543.44Protein transporter Sec24 n=1 Tax=Pythium insidios... [more]
A0A3M6VKT2_9STRA1.070e-2441.80Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A6G0RZF7_9STRA1.990e-2441.80Protein transport protein Sec24-like n=5 Tax=Phyto... [more]
A0A225WSD1_9STRA2.010e-2441.80Protein transporter Sec24 n=1 Tax=Phytophthora meg... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006895Zinc finger, Sec23/Sec24-typePFAMPF04810zf-Sec23_Sec24coord: 6..44
e-value: 1.8E-15
score: 56.7
NoneNo IPR availableGENE3D2.30.30.380coord: 1..64
e-value: 7.6E-24
score: 85.3
NoneNo IPR availablePANTHERPTHR13803:SF13SECRETORY 24CD, ISOFORM Ccoord: 2..124
NoneNo IPR availablePANTHERPTHR13803SEC24-RELATED PROTEINcoord: 2..124
IPR036174Zinc finger, Sec23/Sec24-type superfamilySUPERFAMILY82919Zn-finger domain of Sec23/24coord: 4..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig88493contigH-elongata_contig88493:498..1875 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig88493.16372.1mRNA_H-elongata_contig88493.16372.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig88493 498..1875 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig88493.16372.1 ID=prot_H-elongata_contig88493.16372.1|Name=mRNA_H-elongata_contig88493.16372.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=126bp
AGEGGPIRCEKCRAYMNSVVKFSQNGEKWVCDFCKHEGPVPQSYQCPLDS
SGLRRDRQQRAELSRGSVDFAVPKVSRNPTSTSTSPAVFSVRPEQQPIFV
FCVDASPRALETGFTMACLLAVNAAL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006895Znf_Sec23_Sec24
IPR036174Znf_Sec23_Sec24_sf