prot_H-elongata_contig88241.16354.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig88241.16354.1 vs. uniprot
Match: Q9AYC5_ORYSJ (Putative retroelement pol polyprotein n=2 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q9AYC5_ORYSJ) HSP 1 Score: 50.8 bits (120), Expect = 9.220e-6 Identity = 24/54 (44.44%), Postives = 34/54 (62.96%), Query Frame = 0
Query: 9 WAEAMAYACDMWNRCTSSSLDSDTSPYELWYGRRPTFDNIPPFGTVGYLRRSKP 62
W EA+ A + ++ SLD T PYE WYGRRPT +++ F VGY++ +KP
Sbjct: 586 WGEAVVAAVYVLSKSPMKSLDGVT-PYEAWYGRRPTVEHLRVFECVGYVKTAKP 638
BLAST of mRNA_H-elongata_contig88241.16354.1 vs. uniprot
Match: A0A0J7NGT3_LASNI (Retrovirus-related gag-pol polyprotein n=2 Tax=Lasius niger TaxID=67767 RepID=A0A0J7NGT3_LASNI) HSP 1 Score: 50.1 bits (118), Expect = 1.740e-5 Identity = 25/60 (41.67%), Postives = 35/60 (58.33%), Query Frame = 0
Query: 3 GKSNRLWAEAMAYACDMWNRCTSSSLDSDTSPYELWYGRRPTFDNIPPFGTVGYLRRSKP 62
G S+ WA+A+A AC + NRC SSSL T PYE W G P +++ FG ++ + P
Sbjct: 626 GLSSMFWADAVATACHIRNRCPSSSLGGIT-PYEKWTGELPKLEHLRTFGAKVFVLDNNP 684
BLAST of mRNA_H-elongata_contig88241.16354.1 vs. uniprot
Match: A0A6H5KVR5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR5_9PHAE) HSP 1 Score: 49.3 bits (116), Expect = 3.130e-5 Identity = 24/59 (40.68%), Postives = 32/59 (54.24%), Query Frame = 0
Query: 4 KSNRLWAEAMAYACDMWNRCTSSSLDSDTSPYELWYGRRPTFDNIPPFGTVGYLRRSKP 62
K+++LWAEAM +AC+ N S+ SPYE+WYG P PF Y R +P
Sbjct: 226 KTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE-PRPARPYPFSKPAYCRWQRP 283
BLAST of mRNA_H-elongata_contig88241.16354.1 vs. uniprot
Match: A0A2N9GKV0_FAGSY (Uncharacterized protein n=2 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GKV0_FAGSY) HSP 1 Score: 49.3 bits (116), Expect = 3.250e-5 Identity = 23/55 (41.82%), Postives = 31/55 (56.36%), Query Frame = 0
Query: 8 LWAEAMAYACDMWNRCTSSSLDSDTSPYELWYGRRPTFDNIPPFGTVGYLRRSKP 62
LW EA+ AC + NR S + S SPYELW GR+P + + +G + Y R P
Sbjct: 631 LWGEALLTACHVHNRVLSKKIQS--SPYELWNGRKPNLNYLKVWGCIAYFRVPDP 683
BLAST of mRNA_H-elongata_contig88241.16354.1 vs. uniprot
Match: A0A2N9G3S3_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9G3S3_FAGSY) HSP 1 Score: 48.9 bits (115), Expect = 4.430e-5 Identity = 23/55 (41.82%), Postives = 30/55 (54.55%), Query Frame = 0
Query: 8 LWAEAMAYACDMWNRCTSSSLDSDTSPYELWYGRRPTFDNIPPFGTVGYLRRSKP 62
LW EA+ AC + NR S + S SPYELW GR+P + +G + Y R P
Sbjct: 636 LWGEALLTACHVHNRVLSKKIQS--SPYELWNGRKPNLSYLKVWGCIAYFRVPDP 688
BLAST of mRNA_H-elongata_contig88241.16354.1 vs. uniprot
Match: A0A2N9HL40_FAGSY (Integrase catalytic domain-containing protein n=2 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HL40_FAGSY) HSP 1 Score: 48.9 bits (115), Expect = 4.440e-5 Identity = 23/55 (41.82%), Postives = 30/55 (54.55%), Query Frame = 0
Query: 8 LWAEAMAYACDMWNRCTSSSLDSDTSPYELWYGRRPTFDNIPPFGTVGYLRRSKP 62
LW EA+ AC + NR S + S SPYELW GR+P + +G + Y R P
Sbjct: 570 LWGEALLTACHVHNRVLSKKIQS--SPYELWNGRKPNLSYLKVWGCIAYFRVPDP 622
BLAST of mRNA_H-elongata_contig88241.16354.1 vs. uniprot
Match: A0A2N9HEX1_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HEX1_FAGSY) HSP 1 Score: 48.9 bits (115), Expect = 4.480e-5 Identity = 23/55 (41.82%), Postives = 30/55 (54.55%), Query Frame = 0
Query: 8 LWAEAMAYACDMWNRCTSSSLDSDTSPYELWYGRRPTFDNIPPFGTVGYLRRSKP 62
LW EA+ AC + NR S + S SPYELW GR+P + +G + Y R P
Sbjct: 2167 LWGEALLTACHVHNRVLSKKIQS--SPYELWNGRKPNLSYLKVWGCIAYFRVPDP 2219 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig88241.16354.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig88241.16354.1 ID=prot_H-elongata_contig88241.16354.1|Name=mRNA_H-elongata_contig88241.16354.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=62bpback to top |