prot_H-elongata_contig88174.16345.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig88174.16345.1
Unique Nameprot_H-elongata_contig88174.16345.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length96
Homology
BLAST of mRNA_H-elongata_contig88174.16345.1 vs. uniprot
Match: D7FYH6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYH6_ECTSI)

HSP 1 Score: 120 bits (302), Expect = 1.100e-30
Identity = 55/70 (78.57%), Postives = 65/70 (92.86%), Query Frame = 0
Query:   22 LHGQVFGEGRKVRLRLLDVEACGGALEGIAMEIRDCHSNLVTEVITTTDPETAFAGADVAILLGGFPRLP 91
            +HG+VFGEGRKVRLRLLD+EAC GAL+G AMEI+DC+S+LVTEV+ T+DPE AF GADVA+LLGGFPRLP
Sbjct:    1 MHGRVFGEGRKVRLRLLDIEACVGALQGFAMEIQDCNSDLVTEVVATSDPEVAFKGADVAVLLGGFPRLP 70          
BLAST of mRNA_H-elongata_contig88174.16345.1 vs. uniprot
Match: W2NFM1_PHYPR (Uncharacterized protein n=13 Tax=Phytophthora TaxID=4783 RepID=W2NFM1_PHYPR)

HSP 1 Score: 107 bits (266), Expect = 7.620e-26
Identity = 52/86 (60.47%), Postives = 64/86 (74.42%), Query Frame = 0
Query:    4 VAITGGAGQIAYSLLPLILHGQVFGEGRKVRLRLLDVEACGGALEGIAMEIRDCHSNLVTEVITTTDPETAFAGADVAILLGGFPR 89
            + ++G AGQIAYSLLPLI  G +FG  ++V LRLLD+E    ALEG+ ME++DC  NLV  +I T D ETAF  ADVAIL+GGFPR
Sbjct:    6 IVVSGAAGQIAYSLLPLICIGHIFGPNQRVELRLLDIEPAQEALEGVKMELQDCAFNLVDAIIPTADLETAFKDADVAILVGGFPR 91          
BLAST of mRNA_H-elongata_contig88174.16345.1 vs. uniprot
Match: A0A8K1FKE5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKE5_PYTOL)

HSP 1 Score: 106 bits (265), Expect = 1.240e-25
Identity = 54/86 (62.79%), Postives = 64/86 (74.42%), Query Frame = 0
Query:    4 VAITGGAGQIAYSLLPLILHGQVFGEGRKVRLRLLDVEACGGALEGIAMEIRDCHSNLVTEVITTTDPETAFAGADVAILLGGFPR 89
            V ++G AGQIAYSLLPLI +G VFG  R+V LRLLD+     ALEG+ ME++DC  NLV  VI T+D E AF  ADVAIL+GGFPR
Sbjct:    6 VVVSGAAGQIAYSLLPLICNGLVFGAERRVELRLLDIPMAAEALEGVKMELQDCAYNLVDAVIPTSDLEVAFKDADVAILVGGFPR 91          
BLAST of mRNA_H-elongata_contig88174.16345.1 vs. uniprot
Match: A0A0P1ASB9_PLAHL (Malate cytoplasmic-like n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ASB9_PLAHL)

HSP 1 Score: 103 bits (256), Expect = 7.730e-25
Identity = 50/86 (58.14%), Postives = 64/86 (74.42%), Query Frame = 0
Query:    4 VAITGGAGQIAYSLLPLILHGQVFGEGRKVRLRLLDVEACGGALEGIAMEIRDCHSNLVTEVITTTDPETAFAGADVAILLGGFPR 89
            + ++G AGQIAYSLLPLI  GQVFG  ++V LRLLD+ +   ALEG+ ME++DC  NLV  +I T+D E AF   +VAIL+GGFPR
Sbjct:    6 IVVSGAAGQIAYSLLPLICIGQVFGPNQRVELRLLDIPSAQNALEGVKMELQDCAFNLVDAIIPTSDLEVAFNDVNVAILVGGFPR 91          
BLAST of mRNA_H-elongata_contig88174.16345.1 vs. uniprot
Match: K3WQW7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQW7_GLOUD)

HSP 1 Score: 103 bits (256), Expect = 2.390e-24
Identity = 52/89 (58.43%), Postives = 64/89 (71.91%), Query Frame = 0
Query:    1 SVCVAITGGAGQIAYSLLPLILHGQVFGEGRKVRLRLLDVEACGGALEGIAMEIRDCHSNLVTEVITTTDPETAFAGADVAILLGGFPR 89
            S+ + ++G AGQIAYSLLPLI  G VFG  R+V LRLLD+     ALEG+ ME++DC  NLV E+  T+D E AF   DVAIL+GGFPR
Sbjct:    4 SLKIVVSGAAGQIAYSLLPLICIGHVFGPTRRVSLRLLDIPVAQEALEGVKMELQDCAFNLVDEITPTSDLELAFKDVDVAILVGGFPR 92          
BLAST of mRNA_H-elongata_contig88174.16345.1 vs. uniprot
Match: A0A8J5MC48_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A8J5MC48_9STRA)

HSP 1 Score: 105 bits (261), Expect = 2.580e-24
Identity = 50/86 (58.14%), Postives = 63/86 (73.26%), Query Frame = 0
Query:    4 VAITGGAGQIAYSLLPLILHGQVFGEGRKVRLRLLDVEACGGALEGIAMEIRDCHSNLVTEVITTTDPETAFAGADVAILLGGFPR 89
            + ++G AGQIAYSLLPLI  G +FG  ++V LRLLD+E    ALEG+ ME++DC  NLV  ++ T D ETAF   DVAIL+GGFPR
Sbjct:  246 IVVSGAAGQIAYSLLPLICIGHIFGPNQRVELRLLDIEPAQEALEGVKMELQDCAFNLVDAIVPTADLETAFKDVDVAILVGGFPR 331          
BLAST of mRNA_H-elongata_contig88174.16345.1 vs. uniprot
Match: A0A097IUP6_SACJA (Malate dehydrogenase n=2 Tax=Saccharina TaxID=309357 RepID=A0A097IUP6_SACJA)

HSP 1 Score: 103 bits (257), Expect = 3.660e-24
Identity = 54/89 (60.67%), Postives = 64/89 (71.91%), Query Frame = 0
Query:    4 VAITGGAGQIAYSLLPLILHGQVFGEGRKVRLRLLDVEACGGALEGIAMEIRDC-HSNLVTEVITTTDPETAFAGADVAILLGGFPRLP 91
            V +TGGAGQIAYSL+PLI  G VFG G +V LRLLD+     ALEG+AME++D   S ++  V+ TTD   AF GA VAILLGGFPR P
Sbjct:    6 VVVTGGAGQIAYSLVPLIARGLVFGPGVRVHLRLLDIPPAANALEGVAMEVQDSLFSTVLDGVLATTDEAQAFDGAQVAILLGGFPRRP 94          
BLAST of mRNA_H-elongata_contig88174.16345.1 vs. uniprot
Match: A0A097IUM0_9PHAE (Malate dehydrogenase n=1 Tax=Punctaria latifolia TaxID=90013 RepID=A0A097IUM0_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 4.290e-24
Identity = 53/89 (59.55%), Postives = 65/89 (73.03%), Query Frame = 0
Query:    4 VAITGGAGQIAYSLLPLILHGQVFGEGRKVRLRLLDVEACGGALEGIAMEIRDC-HSNLVTEVITTTDPETAFAGADVAILLGGFPRLP 91
            V +TGGAGQIAYSL+PLI  G VFG G +V LRLLD+     ALEG+AME++D  +S ++  ++ TTD   AF GA VAILLGGFPR P
Sbjct:    6 VVVTGGAGQIAYSLIPLIARGVVFGPGTRVNLRLLDIPPSAKALEGVAMEVQDSLYSTVLDGLLATTDEARAFDGAQVAILLGGFPRRP 94          
BLAST of mRNA_H-elongata_contig88174.16345.1 vs. uniprot
Match: A0A832Y5Q9_9ARCH (Malate dehydrogenase n=7 Tax=Archaea TaxID=2157 RepID=A0A832Y5Q9_9ARCH)

HSP 1 Score: 102 bits (253), Expect = 5.100e-24
Identity = 49/88 (55.68%), Postives = 66/88 (75.00%), Query Frame = 0
Query:    4 VAITGGAGQIAYSLLPLILHGQVFGEGRKVRLRLLDVEACGGALEGIAMEIRDCHSNLVTEVITTTDPETAFAGADVAILLGGFPRLP 91
            VA+TG AGQI YSLLP I  G++FG  RK+RL+LL++     AL G+AME++DC   L+ EV+TTTDP+TAF+GA+  +L+G  PR P
Sbjct:    7 VAVTGAAGQIGYSLLPRIAAGEMFGPDRKIRLQLLEIPPALDALRGVAMELQDCAFPLLEEVVTTTDPDTAFSGANWCLLVGSKPRGP 94          
BLAST of mRNA_H-elongata_contig88174.16345.1 vs. uniprot
Match: A0A418F0B1_9STRA (Ldh_1_N domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418F0B1_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 5.310e-24
Identity = 44/86 (51.16%), Postives = 61/86 (70.93%), Query Frame = 0
Query:    4 VAITGGAGQIAYSLLPLILHGQVFGEGRKVRLRLLDVEACGGALEGIAMEIRDCHSNLVTEVITTTDPETAFAGADVAILLGGFPR 89
            V ++G AGQ+AY+ LPL+  G+V G  +++ LRLLD+      L G+ ME+ DC  +LV +++ TTD ETAF  AD+AILLGGFPR
Sbjct:   11 VVVSGAAGQVAYAFLPLLCSGRVLGPNQRIHLRLLDIPQSLEVLGGVVMELNDCAFHLVDDIVPTTDLETAFENADIAILLGGFPR 96          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig88174.16345.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYH6_ECTSI1.100e-3078.57Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W2NFM1_PHYPR7.620e-2660.47Uncharacterized protein n=13 Tax=Phytophthora TaxI... [more]
A0A8K1FKE5_PYTOL1.240e-2562.79Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A0P1ASB9_PLAHL7.730e-2558.14Malate cytoplasmic-like n=1 Tax=Plasmopara halsted... [more]
K3WQW7_GLOUD2.390e-2458.43Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A8J5MC48_9STRA2.580e-2458.14Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A097IUP6_SACJA3.660e-2460.67Malate dehydrogenase n=2 Tax=Saccharina TaxID=3093... [more]
A0A097IUM0_9PHAE4.290e-2459.55Malate dehydrogenase n=1 Tax=Punctaria latifolia T... [more]
A0A832Y5Q9_9ARCH5.100e-2455.68Malate dehydrogenase n=7 Tax=Archaea TaxID=2157 Re... [more]
A0A418F0B1_9STRA5.310e-2451.16Ldh_1_N domain-containing protein n=1 Tax=Aphanomy... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001236Lactate/malate dehydrogenase, N-terminalPFAMPF00056Ldh_1_Ncoord: 4..91
e-value: 3.6E-13
score: 49.8
NoneNo IPR availableGENE3D3.40.50.720coord: 1..94
e-value: 2.0E-27
score: 97.8
NoneNo IPR availablePANTHERPTHR23382:SF3MALATE DEHYDROGENASE, CYTOPLASMICcoord: 2..90
IPR010945Malate dehydrogenase, type 2PANTHERPTHR23382MALATE DEHYDROGENASEcoord: 2..90
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 4..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig88174contigH-elongata_contig88174:1826..2518 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig88174.16345.1mRNA_H-elongata_contig88174.16345.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig88174 1826..2518 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig88174.16345.1 ID=prot_H-elongata_contig88174.16345.1|Name=mRNA_H-elongata_contig88174.16345.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=96bp
SVCVAITGGAGQIAYSLLPLILHGQVFGEGRKVRLRLLDVEACGGALEGI
AMEIRDCHSNLVTEVITTTDPETAFAGADVAILLGGFPRLPVRSP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001236Lactate/malate_DH_N
IPR010945Malate_DH_type2
IPR036291NAD(P)-bd_dom_sf