prot_H-elongata_contig88171.16344.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig88171.16344.1 vs. uniprot
Match: D8LDN2_ECTSI (General transcription and DNA repair factor IIH helicase subunit XPD n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDN2_ECTSI) HSP 1 Score: 400 bits (1027), Expect = 1.250e-131 Identity = 221/264 (83.71%), Postives = 228/264 (86.36%), Query Frame = 0
Query: 1 WCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLEAASRCLGKISSKVADMKRTDQARLNEEYQRLVSGLADSGLGRSSGGVGGTSTAAGVSARAGGGPGT------------------AGAAADAIPANPALPADILQEAVPGNIRRAEHFVSFLRKIVEHFKLRVRVQSVESETPLAFVHRLQQVTALERKPLKFAYSRLNSLLRTLEVTGLDDFRPLVDVADFATLV 246
WCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSL+AASRCLGKISSKVA+MKRTDQARLN EYQRLVSGLADSGLGR+SGGV G+ AAG AAADAIPANPALPADILQEAVPGNIRRAEHFVSF+RK+VEHFK RVRVQSVESETPLAFVHR+QQVTALERKPLKFAYSRLNSLLRTLEVTGLDDFRPLVDVADFATLV
Sbjct: 189 WCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVAEMKRTDQARLNAEYQRLVSGLADSGLGRASGGVAGS--AAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVAAAADAIPANPALPADILQEAVPGNIRRAEHFVSFMRKVVEHFKTRVRVQSVESETPLAFVHRMQQVTALERKPLKFAYSRLNSLLRTLEVTGLDDFRPLVDVADFATLV 450
BLAST of mRNA_H-elongata_contig88171.16344.1 vs. uniprot
Match: A0A836CJZ4_9STRA (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJZ4_9STRA) HSP 1 Score: 342 bits (876), Expect = 1.520e-108 Identity = 179/246 (72.76%), Postives = 201/246 (81.71%), Query Frame = 0
Query: 1 WCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLEAASRCLGKISSKVADMKRTDQARLNEEYQRLVSGLADSGLGRSSGGVGGTSTAAGVSARAGGGPGTAGAAADAIPANPALPADILQEAVPGNIRRAEHFVSFLRKIVEHFKLRVRVQSVESETPLAFVHRLQQVTALERKPLKFAYSRLNSLLRTLEVTGLDDFRPLVDVADFATLV 246
WCPYFLARH+INHAN+LVYNYQYMLDPKVAG+VSRELEAESVVVFDEAHNIDNVCTEALSV L++ +LEAASRCLG++SSKV DMK+ DQ RLNEEYQRLV+GLAD+ G GV G A + + ANPALPAD+L EAVPGNIRRAEHFVSFLRK++EH K+R+R +VESETPLAF+HRLQQ T +ERKPL+F YSRLNSLLRTLEVT LDDFRPL VADFATLV
Sbjct: 227 WCPYFLARHVINHANILVYNYQYMLDPKVAGLVSRELEAESVVVFDEAHNIDNVCTEALSVQLNRHNLEAASRCLGRVSSKVTDMKQHDQRRLNEEYQRLVNGLADNAAGPLPAGV-------------------QGIADNNMLANPALPADVLAEAVPGNIRRAEHFVSFLRKLIEHLKVRIRATNVESETPLAFLHRLQQNTTIERKPLRFTYSRLNSLLRTLEVTNLDDFRPLSAVADFATLV 453
BLAST of mRNA_H-elongata_contig88171.16344.1 vs. uniprot
Match: K8YZX4_NANGC (General transcription and DNA repair factor IIH helicase subunit XPD (Fragment) n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YZX4_NANGC) HSP 1 Score: 307 bits (787), Expect = 4.520e-95 Identity = 163/248 (65.73%), Postives = 198/248 (79.84%), Query Frame = 0
Query: 1 WCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLEAASRCLGKISSKVADMKRTDQARLNEEYQRLVSGLADSGLGRSSGGVGGTSTAAGVSARAGGGPGTAGAAADAIPANPA--LPADILQEAVPGNIRRAEHFVSFLRKIVEHFKLRVRVQSVESETPLAFVHRLQQVTALERKPLKFAYSRLNSLLRTLEVTGLDDFRPLVDVADFATLV 246
WCPYFLARHIINHAN+L+YNYQY+LDPKVAG+VS+ELEAES+VVFDEAHNIDNVC EALSV+LD+RSL+ A+RCLGK+S++V+ MK+ D +LNEEYQRLV GLA+SG +GG + G G+A + ADA+ ANP LP + QEAVPGNIRRAEHF++F++K+VEH K +RV S + ++PLAF+H LQ TALE KPL+F YSRLNSLLRTLEVT LD+F PL DVADFATLV
Sbjct: 190 WCPYFLARHIINHANILIYNYQYVLDPKVAGLVSKELEAESIVVFDEAHNIDNVCIEALSVELDERSLDKATRCLGKLSTEVSKMKQKDANKLNEEYQRLVRGLAESGA------LGGAA-----------GAGSAASPADAMLANPVPRLPDALAQEAVPGNIRRAEHFLTFMKKVVEHLKTLLRVDSTQKQSPLAFLHYLQTKTALEVKPLRFTYSRLNSLLRTLEVTHLDEFNPLQDVADFATLV 420
BLAST of mRNA_H-elongata_contig88171.16344.1 vs. uniprot
Match: A0A7S2GG08_9STRA (DNA helicase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GG08_9STRA) HSP 1 Score: 279 bits (714), Expect = 1.570e-87 Identity = 156/250 (62.40%), Postives = 177/250 (70.80%), Query Frame = 0
Query: 1 WCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLEAASRCLGKISSKVADMKRTDQARLNEEYQRLVSGLADSGLGRSSGGVGGTSTAAGVSARAGGGPGTAGAAADAIPANPALPADILQEAVPGNIRRAEHFVSFLRKIVEHFKLRV----RVQSVESETPLAFVHRLQQVTALERKPLKFAYSRLNSLLRTLEVTGLDDFRPLVDVADFATLV 246
WCPYFLARH+INHA VLVYNYQYMLDPKVAGMVSRELE+ESVV+FDEAHNIDNVC EALSV LD+RS+ AA + L IS+KV ++K D +RL +EY+RLV+GL D AG D I ANP+LPAD+L EAVPGNIRRAEHFVSFLR I+ H + R+ +VE+ETPLAFVHRL T E KPLKFAYSRLNSLLRTLEVT LD + PL DV D TLV
Sbjct: 233 WCPYFLARHVINHAKVLVYNYQYMLDPKVAGMVSRELESESVVIFDEAHNIDNVCIEALSVALDRRSITAAHQSLDAISTKVREVKTRDASRLQDEYRRLVAGLNDG----------------------------AGGQTDTILANPSLPADVLSEAVPGNIRRAEHFVSFLRTILTHLEQRMISTAENDTVETETPLAFVHRLCGDTHHEIKPLKFAYSRLNSLLRTLEVTSLDQYNPLQDVTDLITLV 454
BLAST of mRNA_H-elongata_contig88171.16344.1 vs. uniprot
Match: A0A7S2N290_9STRA (DNA helicase (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N290_9STRA) HSP 1 Score: 268 bits (684), Expect = 2.140e-87 Identity = 146/251 (58.17%), Postives = 181/251 (72.11%), Query Frame = 0
Query: 1 WCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLEAASRCLGKISSKVADMKRTDQARLNEEYQRLVSGLADSGLGRSSGGVGGTSTAAGVSARAGGGPGTAGAAADAIPANPALPADILQEAVPGNIRRAEHFVSFLRKIVEHFKLRVRVQS-----VESETPLAFVHRLQQVTALERKPLKFAYSRLNSLLRTLEVTGLDDFRPLVDVADFATLV 246
WCPY+L R INHAN+LV+NYQYMLDPKVA MVS+ELEAES++VFDEAHNID+VC EALSVD+++R LE A+R LG++SS+V+ +K +D ARL EYQ LVSGL D GL T A +D + L D+L +AVPGNIRRAEHF++F++K+VEH K R+R + V+SETPLAF+HRL T+LE KPLKFAYSRL+SLLRTL+V+ LDDF L DVADFATL+
Sbjct: 1 WCPYYLTRQAINHANILVFNYQYMLDPKVAKMVSKELEAESIIVFDEAHNIDSVCIEALSVDINERGLEQATRSLGRLSSEVSRIKASDNARLQAEYQNLVSGLIDQGL---------LDTPA----------------SDIGLTSNVLSPDVLNQAVPGNIRRAEHFIAFMKKLVEHLKARLRSVAGPNGGVQSETPLAFLHRLMGGTSLEAKPLKFAYSRLSSLLRTLQVSNLDDFNALTDVADFATLL 226
BLAST of mRNA_H-elongata_contig88171.16344.1 vs. uniprot
Match: A0A7S2D9H7_9STRA (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D9H7_9STRA) HSP 1 Score: 279 bits (714), Expect = 9.500e-85 Identity = 156/250 (62.40%), Postives = 177/250 (70.80%), Query Frame = 0
Query: 1 WCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLEAASRCLGKISSKVADMKRTDQARLNEEYQRLVSGLADSGLGRSSGGVGGTSTAAGVSARAGGGPGTAGAAADAIPANPALPADILQEAVPGNIRRAEHFVSFLRKIVEHFKLRV----RVQSVESETPLAFVHRLQQVTALERKPLKFAYSRLNSLLRTLEVTGLDDFRPLVDVADFATLV 246
WCPYFLARH+INHA VLVYNYQYMLDPKVAGMVSRELE+ESVV+FDEAHNIDNVC EALSV LD+RS+ AA + L IS+KV ++K D +RL +EY+RLV+GL D AG D I ANP+LPAD+L EAVPGNIRRAEHFVSFLR I+ H + R+ +VE+ETPLAFVHRL T E KPLKFAYSRLNSLLRTLEVT LD + PL DV D TLV
Sbjct: 233 WCPYFLARHVINHAKVLVYNYQYMLDPKVAGMVSRELESESVVIFDEAHNIDNVCIEALSVALDRRSITAAHQSLDAISTKVREVKTRDASRLQDEYRRLVAGLNDG----------------------------AGGQTDTILANPSLPADVLSEAVPGNIRRAEHFVSFLRTILTHLEQRMISTAENDTVETETPLAFVHRLCGDTHHEIKPLKFAYSRLNSLLRTLEVTSLDQYNPLQDVTDLITLV 454
BLAST of mRNA_H-elongata_contig88171.16344.1 vs. uniprot
Match: A0A7R9U4D1_9STRA (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4D1_9STRA) HSP 1 Score: 280 bits (716), Expect = 1.030e-84 Identity = 147/246 (59.76%), Postives = 182/246 (73.98%), Query Frame = 0
Query: 1 WCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLEAASRCLGKISSKVADMKRTDQARLNEEYQRLVSGLADSGLGRSSGGVGGTSTAAGVSARAGGGPGTAGAAADAIPANPALPADILQEAVPGNIRRAEHFVSFLRKIVEHFKLRVRVQSVESETPLAFVHRLQQVTALERKPLKFAYSRLNSLLRTLEVTGLDDFRPLVDVADFATLV 246
WCPYFLARH++ HANVL+YNYQYMLDPKVAG+VS ELE +SVVVFDEAHNIDNVC EA+SV + + L+A++R LG ++SKV +MK +D RLN EYQRLVSGLA SG PG+ A D+I +NP+LPADIL E+VPGNIR+AEHF++F+RKIV H K ++R + ETP AF+H+L ++T LE KP+KF YSRLNSLLRTLEVT LDD L ++ADFATL+
Sbjct: 233 WCPYFLARHVLKHANVLIYNYQYMLDPKVAGLVSSELEEDSVVVFDEAHNIDNVCIEAMSVQISRPILDASTRSLGALASKVEEMKASDVERLNAEYQRLVSGLAMSGPA----------------------PGSYTVATDSILSNPSLPADILAESVPGNIRKAEHFLTFMRKIVRHLKDQLRNPEAKWETPQAFLHQLHEMTGLEAKPMKFTYSRLNSLLRTLEVTSLDDHSDLAEIADFATLL 456
BLAST of mRNA_H-elongata_contig88171.16344.1 vs. uniprot
Match: A0A8K1FGF4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGF4_PYTOL) HSP 1 Score: 270 bits (691), Expect = 3.490e-82 Identity = 141/246 (57.32%), Postives = 185/246 (75.20%), Query Frame = 0
Query: 1 WCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLEAASRCLGKISSKVADMKRTDQARLNEEYQRLVSGLADSGLGRSSGGVGGTSTAAGVSARAGGGPGTAGAAADAIPANPALPADILQEAVPGNIRRAEHFVSFLRKIVEHFKLRVRVQSVESETPLAFVHRLQQVTALERKPLKFAYSRLNSLLRTLEVTGLDDFRPLVDVADFATLV 246
WCPYFL R+++ +A+V+VYNYQYMLDPKV+ MVSR E ES+VVFDEAHNIDNVC EALSV+LD+RSL+ ASR L IS++V MK+ D+ARL+ EY+RLV GL RSS V + + +A + D + ANP LP D+L EA+PGNIRRAEHF++F+R+++E+ + R+RV++VESETP AF+H L Q A+E KP+KF Y+RLNSL+RTLE+T L+++ L DVADFATLV
Sbjct: 191 WCPYFLTRYVVTYADVIVYNYQYMLDPKVSAMVSRAFEKESIVVFDEAHNIDNVCIEALSVELDRRSLDRASRNLTTISAQVNKMKQADKARLDAEYRRLVEGL------RSSSAVVAPTYVNPANQQA------IDTSNDILTANPVLPDDVLDEAIPGNIRRAEHFIAFMRRLIEYLRTRIRVRNVESETPQAFLHHLNQAIAMETKPMKFCYTRLNSLMRTLEITNLEEYNSLTDVADFATLV 424
BLAST of mRNA_H-elongata_contig88171.16344.1 vs. uniprot
Match: A0A2P4X6T2_9STRA (General transcription and DNA repair factor IIH helicase subunit XPD (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X6T2_9STRA) HSP 1 Score: 265 bits (676), Expect = 1.950e-81 Identity = 143/249 (57.43%), Postives = 180/249 (72.29%), Query Frame = 0
Query: 1 WCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLEAASRCLGKISSKVADMKRTDQARLNEEYQRLVSGLADSGLGRSSGGVGGTSTAAGVSARAGGGPGTAGA---AADAIPANPALPADILQEAVPGNIRRAEHFVSFLRKIVEHFKLRVRVQSVESETPLAFVHRLQQVTALERKPLKFAYSRLNSLLRTLEVTGLDDFRPLVDVADFATLV 246
WCPYFL R+++ A+V+VYNYQYMLDPKV+ +VSR E ES+VVFDEAHNIDNVC EALSVDLD+RSL+ ASR L +SS+V +K+ D++RL+ EY+RLV GL S V A P T A A D + ANP LP D+L EA+PGNIRRAEHFV+F+R+++E+ + R+RV+ VESETP AF+H L Q +E KP+KF Y+RLNSLLRTLEVT L+++ L DVADFATLV
Sbjct: 195 WCPYFLTRYVVTFADVVVYNYQYMLDPKVSQLVSRSFEKESIVVFDEAHNIDNVCIEALSVDLDRRSLDRASRNLTTLSSQVNKLKQADKSRLDAEYRRLVEGLRSSNA---------------VVAPTYTDPTTNNAIDTANDILIANPVLPDDVLDEAIPGNIRRAEHFVAFMRRLIEYLRQRIRVRQVESETPQAFLHHLHQAINMEIKPMKFCYTRLNSLLRTLEVTNLEEYNSLTDVADFATLV 428
BLAST of mRNA_H-elongata_contig88171.16344.1 vs. uniprot
Match: A0A7S2XLG2_9STRA (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XLG2_9STRA) HSP 1 Score: 269 bits (688), Expect = 3.750e-81 Identity = 146/251 (58.17%), Postives = 182/251 (72.51%), Query Frame = 0
Query: 1 WCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLEAASRCLGKISSKVADMKRTDQARLNEEYQRLVSGLADSGLGRSSGGVGGTSTAAGVSARAGGGPGTAGAAADAIPANPALPADILQEAVPGNIRRAEHFVSFLRKIVEHFKLRVRVQS-----VESETPLAFVHRLQQVTALERKPLKFAYSRLNSLLRTLEVTGLDDFRPLVDVADFATLV 246
WCPY+L R INHAN+LV+NYQYMLDPKVA MVS+ELE+ES++VFDEAHNID+VC EALSV +++R LE A+R LG++SS+V+ +K +D RL EYQ LV+GL D GL + + +G+ A+ AL +D+L EAVPGNIRRAEHFV+F++KIVEH K R+R S V+SETPLAF+HR+ T+LE KPLKFAYSRL SLLRTLEV+ LDDF L DVADFATL+
Sbjct: 279 WCPYYLTRQAINHANILVFNYQYMLDPKVAKMVSKELESESIIVFDEAHNIDSVCIEALSVTINERGLEQATRSLGRLSSEVSRIKSSDNQRLQNEYQNLVNGLIDQGL------LNAPANESGL-------------------ASNALSSDVLNEAVPGNIRRAEHFVAFMKKIVEHLKARLRAVSGPNGGVQSETPLAFLHRMMNGTSLEAKPLKFAYSRLASLLRTLEVSNLDDFNALTDVADFATLL 504 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig88171.16344.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig88171.16344.1 ID=prot_H-elongata_contig88171.16344.1|Name=mRNA_H-elongata_contig88171.16344.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=246bpback to top |