mRNA_H-elongata_contig88154.16342.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig88154.16342.1 vs. uniprot
Match: D7G7D7_ECTSI (Acyl_transf_3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7D7_ECTSI) HSP 1 Score: 418 bits (1075), Expect = 1.450e-135 Identity = 207/428 (48.36%), Postives = 256/428 (59.81%), Query Frame = 1
Query: 13 LPRLTAQVIPGGFLSVDTFFVMSGFLVSSVLLPKLDTMPPRRYMWIP--------QAYLHRYLRLTPTLAFVTFVTWKILPLLGEGPAWWPAMIKQEENCSRYWWVEITYLTNVIPWPPLGSGCTGISWYLANDTQFFLVAVPLVALFHRLPRAGTAVAVLMLTASCLFTLLWIGFHNDVHFSALSA---TEGWMEAYGEPWARCPPYLIGLLCGFFWHAEVRAR-------------------------------------------LRTPGKHVMTPKVAVIVAVASAVLLALPVYGSYWGYQDAVESRMPEWADHIYLAFSRPAWALGVAGMCALCFTGRGGLVNWILTWPTWVVVSRLTYCTYLTHSLLLLWLYAERLTPVKFTSLEYAVTFMGCAVGSFAGAAILHLFVEAPFRNLESWVRKQ 1134
L RL+AQVIPGGF++VD+FF+MSGF +AY+HRYLRLTPTL FVT + WK+LPLLGEG +WWP Q E+C +YWW EI Y++++ PWPPL GCTG+SWYLA+DT +FL+ VP VAL+HR PR + + SC+FT ++ GF V FS + ++GW Y PW+RC YL+G+LCG WH R R L PGK+V P AV+VA+ SA L+ LPVYG+YW YQDA +P WADH+YLAF RP WALG+A MC LCF G GGLVNW+LT P W +SRLTYCTYL H+LLL LY R P++ T LE+AVT+MG G+F G LHL VEAPFRNLES R+Q
Sbjct: 473 LARLSAQVIPGGFMAVDSFFLMSGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAYIHRYLRLTPTLLFVTLMFWKVLPLLGEGASWWPVAHAQAESCRKYWWTEIAYVSSIFPWPPLSDGCTGVSWYLADDTMYFLLGVPTVALYHRRPRLSATLVFVAAVLSCVFTFVYYGFFQQVSFSIFTRVVNSDGWGTVYAVPWSRCSVYLVGMLCGMAWHTHFRGRIGSSAAGGGDAXXXXXXXXXXXXXXXXXXGDGTEQAAKNPLERLAKPGKYVYWP--AVVVALLSAALMGLPVYGTYWDYQDAKNPNLPPWADHLYLAFGRPTWALGLALMCMLCFCGHGGLVNWLLTRPGWTSLSRLTYCTYLFHTLLLTLLYGTRDQPIELTGLEFAVTYMGIVFGTFLGGTGLHLLVEAPFRNLESMGRRQ 898
BLAST of mRNA_H-elongata_contig88154.16342.1 vs. uniprot
Match: A0A835Z165_9STRA (Acyltransferase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z165_9STRA) HSP 1 Score: 262 bits (670), Expect = 5.960e-77 Identity = 155/394 (39.34%), Postives = 203/394 (51.52%), Query Frame = 1
Query: 13 LPRLTAQVIPGGFLSVDTFFVMSGFLVSSVLLPKLDTMPP----RRYMWIPQAYLHRYLRLTPTLAFVTFVTWKILPLLGEGPAWWPAMIKQEENCSRYWWVEITYLTNVIPWPPLGSGCTGISWYLANDTQFFLVAVPLVALFHRLP-RAGTAVAV-----LMLTASCLFTLLWIGFHNDVHFS-------ALSATEG-----WMEAYGEPWARCPPYLIGLLCGFFWH---AEVRARLRTPGKHVMTPKVAVIVAVASAVLLALPVYGSYWGYQDAVESRMPEWADHIYLAFSRPAWALGVAGMCALCFTGRGGLVNWILTWPTWVVVSRLTYCTYLTHSLLLLWLYAERLTPVKFTSLEYAVTFMGCAVGSFAGAAILHLFVEAPFRNLES 1119
L RL+AQ I FLSVDTFF +SGFL++ V L KL P W+P YLHR+LR+TPT + W++LPLL GP W + CS+YWW Y++N++PW G C + WYLAND QF L +PL+ L L RA AV L + ASC F L W+G V F+ A A + W + Y PW+R PY G+L W A V VA A LL VYG+YW YQD V S + + YLA +R AW+LG+ +C CF RGG V +L W +S+LT+C YL H ++ W Y P +F E+AVT+MG A+G+FA + L+L VEAP R +E+
Sbjct: 399 LARLSAQAITSAFLSVDTFFYISGFLLTHVTLSKLSAAAPLSRGAALRWLPALYLHRWLRITPTFMAAVLLYWQVLPLLDAGPLW--DFGADDAACSKYWWTNPLYISNLVPWRT-GLPCFPVGWYLANDFQFALAFLPLLLLGQPLRGRAAATAAVAALCALAVAASCAFAL-WLGLAQGVRFTVFDGGLPAPGAPQSGGYSYWPDYYIRPWSRVVPYAAGVLAALGWRRAAAVATXXXXXXXXXXXXXXXNAAVTVAWAALLGSTVYGTYWAYQD-VPSPISRGENAAYLALARLAWSLGLTALCFQCFANRGGAVQALLAHRAWAPLSKLTFCAYLVHPTVITWFYRAAAGPTRFGEAEFAVTYMGFALGTFAASVPLYLAVEAPLRRVEA 787
BLAST of mRNA_H-elongata_contig88154.16342.1 vs. uniprot
Match: F0Y4I4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4I4_AURAN) HSP 1 Score: 221 bits (563), Expect = 1.240e-60 Identity = 136/372 (36.56%), Postives = 203/372 (54.57%), Query Frame = 1
Query: 31 QVIPGGFLSVDTFFVMSGFL---VSSVLLPKLDTMPPRRYMWIPQAYLHRYLRLTPTLAFVTFVTWKILPLLGEGPAWWPAMIKQE-ENCSRYWWVEITYLTNVIPWPPLGSGCTGISWYLANDTQFFLVAVPLVALFHRLPRAGTAVAVL-MLTASCLFTLLWIGFHNDVHFSALSATEGWMEAYGEPWARCPPYLIGLLCGFFWHAEVRARLRTP-GKHVMTPKVAVIVAVASAVLLALPVYGSYWGYQDAVESRMPEWADHIYLAFSRPAWALGVAGMCALCFTGRGGLVNWILTWPTWVVVSRLTYCTYLTHSLLLLWLYAERLTP-VKFTSLEYAVTFMGCAVGSFAGAAILHLFVEAPFRNLESWV 1125
QV+ SVDTFF +SGFL V+S + + T WIP+AYL RYLRLTP+ AF+ + WK+L + G GP W A + E +C++ +W + Y+ N++P+ C G++WYL ND QFFL+ V+L +L A A AVL L + + W + D+ F+ + + + Y PW R PPYL+G+ F++ + + R P V +A +AVA+A+ V+GSY YQDA S +W +H+YLA ++PAWA ++ + CF GRG V IL+ P + +++LT+ YL H +L LY V FT + + V F+G + + ++HLFVE P NLE V
Sbjct: 300 QVLNAAEFSVDTFFWLSGFLGAFVASKVAARATTCT-----WIPRAYLQRYLRLTPSYAFIVLLWWKVLRVYGSGPVW--AQQRGEYRDCAKTFWTNMLYVNNLVPFHGTEDACYGVAWYLPNDMQFFLLLPGFVSL--KLKSAAAAYAVLGALALASVAYAWWAAYAFDLSFATFDGGDYFPDYYVRPWTRIPPYLVGVATAFYYADAAKDKAREPPSARVAYGSLAAGLAVAAAL-----VFGSYPFYQDA-PSGPAKWKNHLYLALAKPAWACALSLLALPCFFGRGAFVGGILSLPVFAPLAKLTFAAYLIHPAVLDVLYKSSTDARVVFTEVGWYVAFLGVSAIVLLCSLVVHLFVEQPLVNLEKHV 656
BLAST of mRNA_H-elongata_contig88154.16342.1 vs. uniprot
Match: C3YTJ7_BRAFL (NRF domain-containing protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3YTJ7_BRAFL) HSP 1 Score: 205 bits (521), Expect = 5.140e-56 Identity = 135/380 (35.53%), Postives = 202/380 (53.16%), Query Frame = 1
Query: 19 RLTAQVIPGGFLSVDTFFVMSGFLVSSVLLPKLDTM--PPRRY-MWIPQAYLHRYLRLTPTLAFVTFVTWKILPLLGEGPAWWPAMIKQEENCSRYWWVEITYLTNVIPWPPLGSGCTGISWYLANDTQFFLVAVPLVALFHRLPRAGTAVAVLMLTASCLFTLLWIGFHNDVHFSALSATEGWMEA----YGEPWARCPPYLIGLLCGFFWHAEVRARLRTPGKHVMTPKVAVIVAVASAVLLALPVYGSYWGYQDAVESRMPEWADHIYLAFSRPAWALGVAGMCALCFTGRGGLVNWILTWPTWVVVSRLTYCTYLTHSLLLLWLYAE-RLTPVKFTSLEYAVTFMGCAVGSFAGAAILHLFVEAPFRNLESWVRKQ 1134
R + + I GFLSVD+FF +SG L++ ++L +LD RR+ W+ Y+HRY RLTP AF+ + + P + GPA A + C+ WW Y+ N + G+ C G +WYLAND QFF+++VPL+ L R G V++L S T+ W+ H ++ A+S+ +A Y +P+ R PYL+G L G+ + RT G+ M +VA++ +A+ + VYG Y + V P +YL R AW L +A + C G GG++N IL+W W+ +SRLTYC YL H +++ Y + R TP+ +T +E F+G V S+A A I+ + EAP R LE V KQ
Sbjct: 360 RFSFEPILNGFLSVDSFFFLSGVLMAYLMLLQLDKYRREGRRFPYWL--LYVHRYWRLTPVYAFILMLWVWVYPYIMTGPA---ATNTPDPGCTNNWWYNFLYINNFLDMVK-GTECMGWTWYLANDMQFFVISVPLIWLTFRYFLVGMITQVVLLLTSFGVTI-WLAIHYNLQ-PAMSSPGQNPDAMNLYYQKPYCRIGPYLVGTLLGYLLY-------RTRGQFRMHKEVALLGWLAATGIGLGVVYGLYNHLTEGVVLSRP--VAVMYLTVHRTAWGLALAWVVFACVNGYGGIINTILSWKAWIPLSRLTYCAYLVHPMVIFIAYQDQRETPIHYTDIELMYYFVGHVVFSYAVAYIVSMMAEAPMRQLEKLVLKQ 722
BLAST of mRNA_H-elongata_contig88154.16342.1 vs. uniprot
Match: UPI001604316C (nose resistant to fluoxetine protein 6-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI001604316C) HSP 1 Score: 199 bits (507), Expect = 1.030e-55 Identity = 134/380 (35.26%), Postives = 198/380 (52.11%), Query Frame = 1
Query: 13 LPRLTAQVIPGGFLSVDTFFVMSGFLVSSVLLPKLDTM--PPRRY-MWIPQAYLHRYLRLTPTLAFVTFVTWKILPLLGEGPAWWPAMIKQEENCSRYWWVEITYLTNVIPWPPLGSGCTGISWYLANDTQFFLVAVPLVALFHRLPRAGTAVAVLMLTASCLFTL-LWIGFHNDVHFSALSATEGWMEAYGE-PWARCPPYLIGLLCGFFWHAEVRARLRTPGKHVMTPKVAVIVAVASAVLLALPVYGSYWGYQDAVESRMPEWADHIYLAFSRPAWALGVAGMCALCFTGRGGLVNWILTWPTWVVVSRLTYCTYLTHSLLLLWLYAE-RLTPVKFTSLEYAVTFMGCAVGSFAGAAILHLFVEAPFRNLESWVRKQ 1134
+ R + + I GFLSVD+FF +SG L+S ++L +L+ RR+ W+ Y+HRY RLTP AF + + P + GPA A + C+ WW Y+ N + G+ C G +WYLAND QFF+++VPL+ L R G ++L AS T+ L I ++ S+ M Y + P+ R PYL+G + G+F + RT G+ M VA++ +A+ + VYG Y + V P +YL R AW + +A + C G GG++N IL+W W+ +SRLTYC YL H +++ Y + R TPV +T +E F+G V S+A A I+ + EAP R LE V KQ
Sbjct: 127 MKRFSFEPILNGFLSVDSFFFLSGVLMSYLMLLQLNKYRREGRRFPYWL--LYVHRYWRLTPVYAFTLMLYMWVYPYIMTGPA---ATNTPDPGCTNNWWYNFLYINNFLDMVK-GTECMGWTWYLANDMQFFVISVPLIWLTFRYFLVGMITQAVLLQASFGATIGLAIHYNLQPSMSSPGQNPDAMNLYYQKPYCRIGPYLVGTILGYFLY-------RTRGQVRMHKAVALLGWLAATGIGLGVVYGLYNHLTEGVVLSRP--VAVMYLTVHRTAWGVALAWVVFACVNGYGGIINTILSWKAWIPLSRLTYCAYLVHPMVIFIAYQDQRETPVHYTDIELTYYFVGHVVFSYAVAYIVSMMAEAPMRQLEKLVLKQ 491
BLAST of mRNA_H-elongata_contig88154.16342.1 vs. uniprot
Match: A0A6P5A4F0_BRABE (nose resistant to fluoxetine protein 6-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P5A4F0_BRABE) HSP 1 Score: 192 bits (487), Expect = 3.000e-54 Identity = 124/357 (34.73%), Postives = 186/357 (52.10%), Query Frame = 1
Query: 55 SVDTFFVMSGFLVSSVLLPKLDTMPPR-RYMWIPQAYLHRYLRLTPTLAFVTFVTWKILPLLGEGPAWWPAMIKQEENCSRYWWVEITYLTNVIPWPPLGSGCTGISWYLANDTQFFLVAVPLVALFHRLPRAGTAVAVLMLTASCLFTLLWIGFHNDVHFSALSATEGW-MEAYGEPWARCPPYLIGLLCGFFWHAEVRARLRTPGKHVMTPKVAVIVAVASAVLLALPVYGSYWGYQDAVESRMPEWADHI-YLAFSRPAWALGVAGMCALCFTGRGGLVNWILTWPTWVVVSRLTYCTYLTHSLLLLWLYAERLTPVKFTSLEYAVTFMGCAVGSFAGAAILHLFVEAPFRNLE 1116
SVD+FF +SG L++ +LL ++ + + + Y HRY RLTPT FV + +LP + GP W PA + + NC WW I Y+ N++ C SWYLAND QFF++ VPLV + +R G AV + +L AS + T + I +H + L A G ++ Y +P+ R PYL+G+ G+F R ++ + ++ IVA + AV + YG Y G ES +H+ YL R WA+ + + C+ G GG+V+ IL+W WV +SRLTYC YL H L++ +Y R PV ++ F+G S+ A ++ + VEAP LE
Sbjct: 6 SVDSFFFLSGLLMTYLLLRQIGKNREKGKSVPYGMLYFHRYWRLTPTYMFVMMLYVWVLPYMFSGPFWPPAPL--DPNCGDNWWTNILYINNLVN---DDRQCMIWSWYLANDMQFFVIGVPLVYILYRWQILGIAVKLALLLASFITTAV-ISWHYN-----LKAPGGDPVKYYDKPYCRIGPYLVGVAVGWFLVKIKRKETKSTTLRQLMVRIGWIVAASCAVAVLYATYGLYQGTAFKTES------EHVLYLTVHRTVWAMALGWVVIACYHGYGGVVDIILSWDAWVPLSRLTYCAYLVHLLVMYAVYLTREVPVHYSMFTMIYFFLGHLTLSYGVAFLVSVAVEAPLLGLE 345
BLAST of mRNA_H-elongata_contig88154.16342.1 vs. uniprot
Match: UPI0003F0C10D (nose resistant to fluoxetine protein 6-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0C10D) HSP 1 Score: 199 bits (506), Expect = 8.280e-54 Identity = 127/379 (33.51%), Postives = 193/379 (50.92%), Query Frame = 1
Query: 13 LPRLTAQVIPGGFLSVDTFFVMSGFLVSSVLLPKLDTMPPRRYMWIPQAYLHRYLRLTPTLAFVTFVTWKILPLLGEGPAWWPAMIKQEENCSRYWWVEITYLTNVIPWPP-LGSGCTGISWYLANDTQFFLVAVPLVALFHRLPRAGTAVAVLMLTASCLFTLLWIGFHNDVHFS---ALSATEGWMEA----YGEPWARCPPYLIGLLCGFFWHAEVRARLRTPGKHVMTPKVAVIVAVASAVLLALPV-YGSYWGYQDAVESRMPEWADHIYLAFSRPAWALGVAGMCALCFTGRGGLVNWILTWPTWVVVSRLTYCTYLTHSLLLL--WLYAERLTPVKFTSLEYAVTFMGCAVGSFAGAAILHLFVEAPFRNLE 1116
+ R T Q I SVDTFF +SG LV+ + L +L R+ W Y HR+ RLTP FV F + LG+GP + C +YWW + Y+ N++PWP L C G++WYLAND QF +++ ++ L +R P+ G A L++T C+ T + H+++ S +S E + + Y +PW R YLIG++ G+ A V+ R V P++ +V A+A ++AL V YG Y + V SR D Y+ R AW + + + C TG GG +N IL+W W+ +SRLTY YL H +++L +Y +RL + T ++ V S+ + ++ L EAP LE
Sbjct: 369 MKRFTFQAISNATFSVDTFFFLSGLLVTYLTLRELKE--GRKINWF-LFYFHRFWRLTPLYMFVVFFNTYLFVYLGDGPMAEGYRTSLQNPCEQYWWTNLLYINNIVPWPAALADQCYGVAWYLANDMQFHVISPFIIVLLYRWPKIGIASIALLMTM-CIGTRAGLAVHHNLTSSMALTVSDPERYFISSPYYYTKPWTRICTYLIGMIVGY---ALVKTSCR-----VKIPRIVNVVCWAAAWIIALAVLYGLYSTFHGTVLSRP---VDVFYMTVCRIAWGVAIGWLTFACLTGYGGPINAILSWKAWIPISRLTYTAYLIHIMVILVYMMYRDRL--IHLTDFNEIYMYIAGLVLSYCASFVVSLMAEAPMMRLE 730
BLAST of mRNA_H-elongata_contig88154.16342.1 vs. uniprot
Match: A0A4D9CVQ6_9STRA (Acyl_transf_3 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CVQ6_9STRA) HSP 1 Score: 197 bits (501), Expect = 7.840e-53 Identity = 123/385 (31.95%), Postives = 177/385 (45.97%), Query Frame = 1
Query: 46 GFLSVDTFFVMSGFLVSSVLLPKLDT-----MPPRRYMWIPQAYLHRYLRLTPTLAFVTFVTWKILPLLGEGPAWWPAMIKQEENCSRYWWVEITYLTNVIPW--PPLGSGCTGISWYLANDTQFFLVAVPLVALFHRLPRAGTAVAVLMLTASCLFTLLWIGFHNDVH-------FSALSATEGWMEAYGEPWARCPPYLIGLLCGFFWHAEVRARLRTPGK-HVMTPKVAVIVAVASAVLLALPVYGSYWGYQDAVESRMP--------EWADHI---YLAFSRPAWALGVAGMCALCFTGRGGLVNWILTWPTWVVVSRLTYCTYLTHSLLLLWLYAERLTPVKFTSLEYAVTFMGCAVGSFAGAAILHLFVEAPFRNLESW 1122
G LSVDTFF +SGFL S +LL KLD + Y WIP YLHR+LR+TP F F+ WKI PLL GP C WW YL ++ PW LG C G SWYLAND Q++L+ VP L +R PR +CL T + + + + + + E + PW RC Y+IG+L + W+ + + GK H + V+ VLLA+ +YG + G + + W+ +A RP W LG+ + LC+ +GG + L P W +S L++C YL H +L + ++R ++F + T+ G S A + L VE PF L+ +
Sbjct: 369 GTLSVDTFFFISGFLASYMLLVKLDKEHAKGLSKPAYKWIPSLYLHRWLRITPAYMFAFFLHWKIAPLLAYGPLAATVWENNIRPCRGVWWSHFLYLNDIYPWWNQRLGEVCYGHSWYLANDMQYYLL-VPFFCLLYRSPRINGKKLATYAVWACLLTCIIVSWTLTIKDNWSPNSWDGVDGDHYREEGFSRPWTRCSSYMIGILFSYMWYEKKQGN--PDGKFHTFQAN---FLWVSGLVLLAVSMYGPHSGSAGVIPCAIAAPGTPCGSNWSPSTRAAIIALLRPTWTLGLGCLSVLCWNNQGGFIQKFLAAPLWFPLSTLSFCIYLVHYTVLTYYISQRTMRIRFELFGFLNTYFGLMAISCGLALFVVLLVEKPFMKLQKY 747
BLAST of mRNA_H-elongata_contig88154.16342.1 vs. uniprot
Match: A0A6P5AAX9_BRABE (nose resistant to fluoxetine protein 6-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P5AAX9_BRABE) HSP 1 Score: 196 bits (498), Expect = 7.900e-53 Identity = 129/379 (34.04%), Postives = 201/379 (53.03%), Query Frame = 1
Query: 19 RLTAQVIPGGFLSVDTFFVMSGFLVSSVLLPKLDTM--PPRRYMWIPQAYLHRYLRLTPTLAFVTFVTWKILPLLGEGPAWWPAMIKQEENCSRYWWVEITYLTNVIPWPPLGSGCTGISWYLANDTQFFLVAVPLVALFHRLPRAGTAVAVLMLTASCLFTLLWIGFHNDVHFSALSATEGWMEA----YGEPWARCPPYLIGLLCGFFWHAEVRARLRTPGKHVMTPKVAVIVAVASAVLLALPVYGSYWGYQDAVESRMPEWADHIYLAFSRPAWALGVAGMCALCFTGRGGLVNWILTWPTWVVVSRLTYCTYLTHSLLLLWLYAERL-TPVKFTSLEYAVTFMGCAVGSFAGAAILHLFVEAPFRNLESWVRKQ 1134
R +++ I GF SVD+FF +SG L++ ++L +LD RR+ + Q Y+HRY RLTP AFV + + P + GPA A + C + WW Y+ N + + C G +WYLAND QFF+++VP++ L R G V++L AS T+ + H ++ L++ + +A Y +P+ R PYL+GL+ G+ + RT G+ M VA++ +A+ + VYG Y V P +YL R AW +G+A + C G GG++N IL+ W+ +SRLTYC YL H +++ +Y ++ T + +T + A F+G V S+A A I+ + EAP R+LE V KQ
Sbjct: 346 RFSSEPILNGFSSVDSFFFLSGVLMAYLMLLQLDKYRREGRRFPYW-QLYVHRYWRLTPVYAFVLMLWVWVYPYIMTGPA---ATTAPDPGCPKNWWYNFLYINNFLDMVTVNIQCMGWTWYLANDMQFFVISVPIIWLTFRYLLVGMITQVVLLLASFGATI-GLAIHYNLQ-PVLTSPGQYPDATNLIYQKPYCRIGPYLVGLMLGYLLY-------RTRGQVRMHKAVALLGWLAATGICMGVVYGLYNHLTQGVVLSRP--VAILYLTVHRTAWGVGLAWVVFACVNGYGGIINTILSLKAWIPLSRLTYCAYLVHPMVIYLVYQDQTETNIHYTDILLAYYFVGHVVFSYAVAYIVSMMAEAPMRHLEKLVLKQ 709
BLAST of mRNA_H-elongata_contig88154.16342.1 vs. uniprot
Match: A0A6P5AKC8_BRABE (nose resistant to fluoxetine protein 6-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P5AKC8_BRABE) HSP 1 Score: 195 bits (495), Expect = 2.500e-52 Identity = 129/380 (33.95%), Postives = 199/380 (52.37%), Query Frame = 1
Query: 13 LPRLTAQVIPGGFLSVDTFFVMSGFLVSSVLLPKLDTM--PPRRY-MWIPQAYLHRYLRLTPTLAFVTFVTWKILPLLGEGPAWWPAMIKQEENCSRYWWVEITYLTNVIPWPPLGSGCTGISWYLANDTQFFLVAVPLVALFHRLPRAGTAVAVLMLTASCLFTL-LWIGFHNDVHFSALSATEGWMEAYGE-PWARCPPYLIGLLCGFFWHAEVRARLRTPGKHVMTPKVAVIVAVASAVLLALPVYGSYWGYQDAVESRMPEWADHIYLAFSRPAWALGVAGMCALCFTGRGGLVNWILTWPTWVVVSRLTYCTYLTHSLLLLWLYAERLTP-VKFTSLEYAVTFMGCAVGSFAGAAILHLFVEAPFRNLESWVRKQ 1134
+ R + + I GFLSVD+FF +SG L++ ++L +LD RR+ W+ Y+HRY RLTP AFV + + P + GPA A + C + WW Y+ N + G C G +WYLAND QFF+++VP++ + R G V++L AS T+ L I ++ S+ M Y + P+ R PYL+G + G+ + RT G+ M VA++ +A+ + VYG Y V P +YL R AW +G+A + C G GG++N IL+W W+ +SRLTYC YL H +++ +Y +++ + ++ + A F+G V S+A A I+ + EAP R+LE V KQ
Sbjct: 360 MKRFSFEPILNGFLSVDSFFFLSGVLMAYLMLLQLDKYRREGRRFPYWL--LYVHRYWRLTPVYAFVLMLWVWVYPYIMTGPA---ATTAADPGCLKNWWYNFLYINNFLDMVT-GKECMGWTWYLANDMQFFVISVPIIWITFRYFLVGMITQVVLLLASFGATIGLAIHYNLQPTMSSAGQNPDAMNLYYQKPYCRIGPYLVGTMLGYLLY-------RTRGQVRMHKAVALLGWLAATGICMGVVYGLYNHLTQGVVLSRP--VAILYLTVHRTAWGVGLAWVVFACVNGYGGIINTILSWKAWIPLSRLTYCAYLVHPMVIFIVYQDQMEANIHYSDILLAYYFVGHVVFSYAVAYIVSMMAEAPMRHLEKLVLKQ 724 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig88154.16342.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig88154.16342.1 >prot_H-elongata_contig88154.16342.1 ID=prot_H-elongata_contig88154.16342.1|Name=mRNA_H-elongata_contig88154.16342.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=386bp MRLKLPRLTAQVIPGGFLSVDTFFVMSGFLVSSVLLPKLDTMPPRRYMWIback to top mRNA from alignment at H-elongata_contig88154:322..1903+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig88154.16342.1 ID=mRNA_H-elongata_contig88154.16342.1|Name=mRNA_H-elongata_contig88154.16342.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1582bp|location=Sequence derived from alignment at H-elongata_contig88154:322..1903+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig88154:322..1903+ >mRNA_H-elongata_contig88154.16342.1 ID=mRNA_H-elongata_contig88154.16342.1|Name=mRNA_H-elongata_contig88154.16342.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2316bp|location=Sequence derived from alignment at H-elongata_contig88154:322..1903+ (Himanthalia elongata Himel1 dioecious)back to top |