mRNA_H-elongata_contig88149.16341.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig88149.16341.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE) HSP 1 Score: 134 bits (337), Expect = 3.990e-36 Identity = 66/73 (90.41%), Postives = 67/73 (91.78%), Query Frame = 1
Query: 1 DFPHLANLARRVLAIPATQAESERLISCAGNIFTKNRNNLAPTTVELLVLLRHSWNIVKEWEASNNAAAAKRG 219
DFPHLANLARRVLAIPATQAESERL SCAGNI TKNRNNLAPTTVELLVLLRHSW IV+EWE SN AAAKRG
Sbjct: 233 DFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVEEWEQSNTPAAAKRG 305
BLAST of mRNA_H-elongata_contig88149.16341.1 vs. uniprot
Match: A0A6H5JPB0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPB0_9PHAE) HSP 1 Score: 130 bits (327), Expect = 1.780e-35 Identity = 64/73 (87.67%), Postives = 66/73 (90.41%), Query Frame = 1
Query: 1 DFPHLANLARRVLAIPATQAESERLISCAGNIFTKNRNNLAPTTVELLVLLRHSWNIVKEWEASNNAAAAKRG 219
DFPHLANLARRVLAIPATQA+SERL SCAGNI TKNRNNLAPTTVELLVLLRHSW IV+EWE SN AAA RG
Sbjct: 153 DFPHLANLARRVLAIPATQAKSERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVEEWEQSNTPAAAMRG 225
BLAST of mRNA_H-elongata_contig88149.16341.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 70.1 bits (170), Expect = 1.540e-11 Identity = 35/64 (54.69%), Postives = 45/64 (70.31%), Query Frame = 1
Query: 1 DFPHLANLARRVLAIPATQAESERLISCAGNIFTKNRNNLAPTTVELLVLLRHSWNIVKEWEAS 192
++P LA LARRVLAIP++QA+SER+ S AG T R+ L VELLV LR+ W +V EW+ S
Sbjct: 493 EYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYLRNVWGVVDEWKKS 556
BLAST of mRNA_H-elongata_contig88149.16341.1 vs. uniprot
Match: A0A1X7SR93_AMPQE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7SR93_AMPQE) HSP 1 Score: 60.8 bits (146), Expect = 2.680e-9 Identity = 28/50 (56.00%), Postives = 36/50 (72.00%), Query Frame = 1
Query: 4 FPHLANLARRVLAIPATQAESERLISCAGNIFTKNRNNLAPTTVELLVLL 153
FPHL+++AR++L IPAT SER+ S AG I TK R NL P V++LV L
Sbjct: 79 FPHLSDIARKLLCIPATSVPSERIFSVAGGIVTKKRTNLKPENVDMLVFL 128
BLAST of mRNA_H-elongata_contig88149.16341.1 vs. uniprot
Match: A0A094DPG2_9PEZI (Dimer_Tnp_hAT domain-containing protein n=3 Tax=unclassified Pseudogymnoascus TaxID=2637121 RepID=A0A094DPG2_9PEZI) HSP 1 Score: 59.7 bits (143), Expect = 2.970e-9 Identity = 28/60 (46.67%), Postives = 43/60 (71.67%), Query Frame = 1
Query: 1 DFPHLANLARRVLAIPATQAESERLISCAGNIFTKNRNNLAPTTVELLVLLRHSWNIVKE 180
+P +A++A+ LAIPAT A+SER+ S G+I TK RN L+P+T+ L+ LR+ W I+ +
Sbjct: 22 QYPLIASIAKDYLAIPATSADSERVFSVGGDIITKKRNQLSPSTLRYLLCLRN-WGILSQ 80
BLAST of mRNA_H-elongata_contig88149.16341.1 vs. uniprot
Match: R7TXQ1_CAPTE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7TXQ1_CAPTE) HSP 1 Score: 58.5 bits (140), Expect = 3.670e-9 Identity = 29/54 (53.70%), Postives = 37/54 (68.52%), Query Frame = 1
Query: 1 DFPHLANLARRVLAIPATQAESERLISCAGNIFTKNRNNLAPTTVELLVLLRHS 162
+FP +A LA++ LAIPAT A SER+ S AGNI T R+ L P V +LV L H+
Sbjct: 5 NFPRIALLAKKYLAIPATSAPSERVFSTAGNIVTPKRSRLNPEKVNMLVFLAHN 58
BLAST of mRNA_H-elongata_contig88149.16341.1 vs. uniprot
Match: A0A094G1R4_9PEZI (Uncharacterized protein n=1 Tax=Pseudogymnoascus sp. VKM F-4518 (FW-2643) TaxID=1420913 RepID=A0A094G1R4_9PEZI) HSP 1 Score: 63.2 bits (152), Expect = 4.280e-9 Identity = 33/64 (51.56%), Postives = 43/64 (67.19%), Query Frame = 1
Query: 1 DFPHLANLARRVLAIPATQAESERLISCAGNIFTKNRNNLAPTTVELLVLLRHSWNIVKEWEAS 192
+P LA +A+ LAIPAT AESER+ S G+I TK RN LAP+T+ L+ LR+ W +V E S
Sbjct: 748 QYPILAAIAKDHLAIPATSAESERVFSVGGDIITKKRNRLAPSTLRYLICLRN-WGVVSPGEDS 810
BLAST of mRNA_H-elongata_contig88149.16341.1 vs. uniprot
Match: U9UJJ0_RHIID (Dimer_Tnp_hAT domain-containing protein (Fragment) n=3 Tax=Rhizophagus irregularis TaxID=588596 RepID=U9UJJ0_RHIID) HSP 1 Score: 57.4 bits (137), Expect = 1.140e-8 Identity = 25/53 (47.17%), Postives = 38/53 (71.70%), Query Frame = 1
Query: 1 DFPHLANLARRVLAIPATQAESERLISCAGNIFTKNRNNLAPTTVELLVLLRH 159
++PHLAN+A+ L +PAT A SER+ S A ++ T +R +LAP TV ++ L+H
Sbjct: 4 EYPHLANMAKDYLGVPATSAPSERIFSSAADVITYDRASLAPETVRSVMCLKH 56
BLAST of mRNA_H-elongata_contig88149.16341.1 vs. uniprot
Match: A0A2P6FGM7_9PEZI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Pseudogymnoascus destructans TaxID=655981 RepID=A0A2P6FGM7_9PEZI) HSP 1 Score: 59.7 bits (143), Expect = 1.680e-8 Identity = 28/60 (46.67%), Postives = 43/60 (71.67%), Query Frame = 1
Query: 1 DFPHLANLARRVLAIPATQAESERLISCAGNIFTKNRNNLAPTTVELLVLLRHSWNIVKE 180
+P +A++A+ LAIPAT A+SER+ S G+I TK RN L+P+T+ L+ LR+ W I+ +
Sbjct: 108 QYPLIASIAKDHLAIPATSADSERVFSVGGDIITKKRNRLSPSTLRYLLCLRN-WGIISQ 166
BLAST of mRNA_H-elongata_contig88149.16341.1 vs. uniprot
Match: A0A094E365_9PEZI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Pseudogymnoascus sp. VKM F-4516 (FW-969) TaxID=1420910 RepID=A0A094E365_9PEZI) HSP 1 Score: 57.4 bits (137), Expect = 2.090e-8 Identity = 29/67 (43.28%), Postives = 42/67 (62.69%), Query Frame = 1
Query: 1 DFPHLANLARRVLAIPATQAESERLISCAGNIFTKNRNNLAPTTVELLVLLRHSWNIVKEWEASNNA 201
+P LA + + LAIPAT AES+RL S G+I TK RN L+P+T+ L+ LR+ W ++ + A
Sbjct: 17 QYPILARIVKDHLAIPATSAESKRLFSIGGDIVTKKRNRLSPSTLRYLLCLRN-WGVLSPGNEEDGA 82 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig88149.16341.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig88149.16341.1 >prot_H-elongata_contig88149.16341.1 ID=prot_H-elongata_contig88149.16341.1|Name=mRNA_H-elongata_contig88149.16341.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=74bp DFPHLANLARRVLAIPATQAESERLISCAGNIFTKNRNNLAPTTVELLVLback to top mRNA from alignment at H-elongata_contig88149:2279..2650+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig88149.16341.1 ID=mRNA_H-elongata_contig88149.16341.1|Name=mRNA_H-elongata_contig88149.16341.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=372bp|location=Sequence derived from alignment at H-elongata_contig88149:2279..2650+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig88149:2279..2650+ >mRNA_H-elongata_contig88149.16341.1 ID=mRNA_H-elongata_contig88149.16341.1|Name=mRNA_H-elongata_contig88149.16341.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=444bp|location=Sequence derived from alignment at H-elongata_contig88149:2279..2650+ (Himanthalia elongata Himel1 dioecious)back to top |