prot_H-elongata_contig88149.16339.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig88149.16339.1
Unique Nameprot_H-elongata_contig88149.16339.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length195
Homology
BLAST of mRNA_H-elongata_contig88149.16339.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE)

HSP 1 Score: 268 bits (684), Expect = 7.970e-82
Identity = 150/193 (77.72%), Postives = 164/193 (84.97%), Query Frame = 0
Query:    4 AQVPVSQRRNCVTTMRTVKTAMMKKVSRLIKSEYVCITSDGWTSCANDTYMSLT----------VTLSVDCSKSEGTTTGDALAAGIKATVAKHGLTGKITAVTTDYEPSMVKMGRLLE-EGDVCTQIGCCNHRLESTT-IVFNGPGVKKVITLARGLVTRYSTSSQAADWLKQFVKTYLGFENKRVIQDMAT 184
            A+VP  ++++CVTTMRTVK  MM+KVSRLI+ E VCITSDGWTSCANDTYMSLT          VTLSVDCSKSEGTTTGDALAAGIKATVAKHGLTGK+TAVTTD EPSMVKMGRLL  +  V TQIGCCN+RLEST+ IVFNGP VKKV+ LARGLVTRY TSSQAAD LKQFVKTYLG +NKRVIQD+ T
Sbjct:    9 ARVP--EKKDCVTTMRTVKKCMMEKVSRLIEGEQVCITSDGWTSCANDTYMSLTFTLITSAWKLVTLSVDCSKSEGTTTGDALAAGIKATVAKHGLTGKVTAVTTDCEPSMVKMGRLLAGDATVSTQIGCCNYRLESTSSIVFNGPRVKKVMVLARGLVTRYPTSSQAADRLKQFVKTYLGVDNKRVIQDVVT 199          
BLAST of mRNA_H-elongata_contig88149.16339.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE)

HSP 1 Score: 162 bits (411), Expect = 2.520e-44
Identity = 93/203 (45.81%), Postives = 129/203 (63.55%), Query Frame = 0
Query:    4 AQVPVSQRRNCVTTMRTVKTAMMKKVSRLIKSEYVCITSDGWTSCANDTYMSLTVT----------LSVDCSKSEGTTTGDALAAGIKATVAKHGLTGKITAVTTDYEPSMVKMGRLLEEGDVCTQIGCCNHRLES-TTIVFNGPGVKKVITLARGLVTRYSTSSQAADWLKQFVKTYLGFENKRVIQDMATRWWSTCSMVAR 195
            ++  V  +R  +  +R +K  + ++V   +  E+V +TSDGWTS +NDTYM  T T          L V+C K  G TTG+ L   +KA +A++GLT +  A TTD EPSMVK GRLLEE +  T +GC  HRLES T+  F GPGV K + LAR +VTRY+ SSQA+D L+Q ++  +  E K+V+QD+ TRWWST + + R
Sbjct:   16 SRATVPHKRLFLEKLRGMKKGLDQEVLGRLTGEHVAVTSDGWTSASNDTYMYFTCTYISSNFDLVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQ-MRDIVQVERKKVVQDVETRWWSTYASICR 217          
BLAST of mRNA_H-elongata_contig88149.16339.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 156 bits (395), Expect = 1.580e-41
Identity = 101/204 (49.51%), Postives = 130/204 (63.73%), Query Frame = 0
Query:    4 AQVPVSQRRNCVTTMRTVKTAMMKKVSRLIKSEYVCITSDGWTSCANDTYMSLTVT----------LSVDCSKSEGTTTGDALAAGIKATVAKHGLTGKITAVTTDYEPSMVKMGRLLE-EGDVCTQIGCCNHRLESTTI-VFNGPGVKKVITLARGLVTRYSTSSQAADWLKQFVKTYLGFENKRVIQDMATRWWSTCSMVAR 195
            A+VP   RR  ++ MR VKTA+  +V+ ++ +E+V IT+DGWTS  N++YMSLTV           LS+DC+K  GTTTG+ LAA +   V +H LTG++ A  TD EPSM+K GRLLE +G   + IGC NHR+ESTT  VFNG  +   + LAR LV RY  SSQ A  L Q     L  E   V+QD+ TRWWST +MV R
Sbjct:    9 AKVP--SRRELLSRMRAVKTALESEVALMLDAEFVAITTDGWTSRNNESYMSLTVAYIDYEWKLHHLSLDCAKHTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLG-ALGLARTLVGRYKKSSQMAARLVQLCGI-LQMEPLSVMQDVETRWWSTWAMVVR 208          
BLAST of mRNA_H-elongata_contig88149.16339.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 9.270e-40
Identity = 87/171 (50.88%), Postives = 111/171 (64.91%), Query Frame = 0
Query:   36 EYVCITSDGWTSCANDTYMSLTVT----------LSVDCSKSEGTTTGDALAAGIKATVAKHGLTGKITAVTTDYEPSMVKMGRLLEEGDVCTQIGCCNHRLES-TTIVFNGPGVKKVITLARGLVTRYSTSSQAADWLKQFVKTYLGFENKRVIQDMATRWWSTCSMVAR 195
            E+V +TSDGWT  +NDTYMS T T          L ++C K    T G+ L   +KA +A++GLTG+  A+TTD E SMVK GRLLEE +  T +GC  HRLES T+  F GPGV K + LARG+VTRY+ SSQA+D L+Q V   +  E K V+QD+ TRWWST   + R
Sbjct:    4 EHVALTSDGWTPASNDTYMSFTCTYISSNFDLVALCLECKKHGWRTAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQ-VCDIVQVERKNVVQDVETRWWSTYVSICR 173          
BLAST of mRNA_H-elongata_contig88149.16339.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 1.250e-36
Identity = 92/204 (45.10%), Postives = 126/204 (61.76%), Query Frame = 0
Query:    4 AQVPVSQRRNCVTTMRTVKTAMMKKVSRLIKSEYVCITSDGWTSCANDTYMSLTVT----------LSVDCSKSEGTTTGDALAAGIKATVAKHGLTGKITAVTTDYEPSMVKMGRLLEEGDVCTQ-IGCCNHRLESTTI-VFNGPGVKKVITLARGLVTRYSTSSQAADWLKQFVKTYLGFENKRVIQDMATRWWSTCSMVAR 195
            A+ P+  RR  V  MR +K  +  +V+ ++  EYV IT+DGWTS +N++YMSLTV           LS++C+K  G+T G+ LA  I + + +HGLTG++TA  TD EPSMVK GRLLE G    + IGC NHR+ESTT  VFNG  +   +  AR +V RY  SSQ +  L  F+   L      V+QD+ TRWWS+ +M+ R
Sbjct:   45 ARAPI--RRALVEKMREIKKNLESEVALMLDDEYVAITTDGWTSRSNESYMSLTVAYIDVGWQLHHLSLNCTKHTGSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLG-ALAKARAVVGRYKRSSQMSGRLAVFIGI-LKLSPLSVLQDVETRWWSSWAMIER 244          
BLAST of mRNA_H-elongata_contig88149.16339.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE)

HSP 1 Score: 129 bits (324), Expect = 2.230e-32
Identity = 74/154 (48.05%), Postives = 98/154 (63.64%), Query Frame = 0
Query:   47 SCANDTYMSLTVT----------LSVDCSKSEGTTTGDALAAGIKATVAKHGLTGKITAVTTDYEPSMVKMGRLLEEGDVCTQIGCCNHRLES-TTIVFNGPGVKKVITLARGLVTRYSTSSQAADWLKQFVKTYLGFENKRVIQDMATRWWST 189
            S +NDTYM+ T T          L ++  K  G TTG+ L   +KA +A++GLTG+  A TTD EP MVK GRLLEE +  + +GC  HR ES T+  F GPGV K + L RG+VTRY+ SSQA++ L+Q     +  E K+V+QD+ TRWWST
Sbjct:    3 SASNDTYMTFTCTYISSNFDLVALCLEYKKHGGRTTGEDLVEAVKAMIARNGLTGRTVATTTDCEPFMVKAGRLLEENEGVSHLGCFCHRFESITSQAFGGPGVSKALALPRGVVTRYTMSSQASNRLEQMCDI-VQVERKKVVQDVETRWWST 155          
BLAST of mRNA_H-elongata_contig88149.16339.1 vs. uniprot
Match: A0A6G0HG17_LARCR (DUF659 domain-containing protein n=1 Tax=Larimichthys crocea TaxID=215358 RepID=A0A6G0HG17_LARCR)

HSP 1 Score: 65.5 bits (158), Expect = 4.440e-9
Identity = 55/181 (30.39%), Postives = 90/181 (49.72%), Query Frame = 0
Query:   26 MKKVSRLIKSEYVCITSDGWTSCANDTYMSLT---VTLSVDCSKS-------EGTTTGDALAAGIKATVAKHGLTGKITAVTTDYEPSMVKMGRLLEEGDVCTQIGCCNHRLE-STTIVFNGPGVKKVITLARGLVTRYSTSSQAADWLKQFVKTYLGFENKRVIQDMATRWWSTCSMVAR 195
            M  V  + +++ V IT DGWTSCA D+Y+++T   VT   D             + TG  LAA ++  + +  +T K  A+ TD   +MV  G      DV   + C  H L  ++        V +++   R +VT +  S QAA+ L++ +++ L   N ++I D+ TRW S+  M+ R
Sbjct:  105 MDVVDSMSRAQRVSITVDGWTSCATDSYITVTAHYVTEEWDLQSHVLQTRVFNASHTGANLAALLQNVLREWNITDKNPALVTDNARNMVVAGA---GADVTPHVRCVAHTLNLASQKALKMDRVSELLVKVRKVVTYFHKSPQAAEVLRE-IQSQLHLPNHKLIHDVCTRWNSSVDMLER 281          
BLAST of mRNA_H-elongata_contig88149.16339.1 vs. uniprot
Match: A0A6G0HEN4_LARCR (HECT domain-containing protein n=2 Tax=Larimichthys crocea TaxID=215358 RepID=A0A6G0HEN4_LARCR)

HSP 1 Score: 65.5 bits (158), Expect = 5.250e-9
Identity = 55/181 (30.39%), Postives = 90/181 (49.72%), Query Frame = 0
Query:   26 MKKVSRLIKSEYVCITSDGWTSCANDTYMSLT---VTLSVDCSKS-------EGTTTGDALAAGIKATVAKHGLTGKITAVTTDYEPSMVKMGRLLEEGDVCTQIGCCNHRLE-STTIVFNGPGVKKVITLARGLVTRYSTSSQAADWLKQFVKTYLGFENKRVIQDMATRWWSTCSMVAR 195
            M  V  + +++ V IT DGWTSCA D+Y+++T   VT   D             + TG  LAA ++  + +  +T K  A+ TD   +MV  G      DV   + C  H L  ++        V +++   R +VT +  S QAA+ L++ +++ L   N ++I D+ TRW S+  M+ R
Sbjct:  105 MDVVDSMSRAQRVSITVDGWTSCATDSYITVTAHYVTEEWDLQSHVLQTRVFNASHTGANLAALLQNVLREWNITDKNPALVTDNARNMVVAGA---GADVTPHVRCVAHTLNLASQKALKMDRVSELLVKVRKVVTYFHKSPQAAEVLRE-IQSQLHLPNHKLIHDVCTRWNSSVDMLER 281          
BLAST of mRNA_H-elongata_contig88149.16339.1 vs. uniprot
Match: UPI000F601F68 (zinc finger BED domain-containing protein 1-like n=1 Tax=Larimichthys crocea TaxID=215358 RepID=UPI000F601F68)

HSP 1 Score: 64.3 bits (155), Expect = 9.320e-9
Identity = 54/181 (29.83%), Postives = 90/181 (49.72%), Query Frame = 0
Query:   26 MKKVSRLIKSEYVCITSDGWTSCANDTYMSLT---VTLSVDCSKS-------EGTTTGDALAAGIKATVAKHGLTGKITAVTTDYEPSMVKMGRLLEEGDVCTQIGCCNHRLE-STTIVFNGPGVKKVITLARGLVTRYSTSSQAADWLKQFVKTYLGFENKRVIQDMATRWWSTCSMVAR 195
            M  V  + +++ V IT DGWTSCA D+Y+++T   VT   D             + TG  LAA ++  + +  +T K  A+ TD   +MV  G      D+   + C  H L  ++        V +++   R +VT +  S QAA+ L++ +++ L   N ++I D+ TRW S+  M+ R
Sbjct:    1 MDVVDSMSRAQRVSITVDGWTSCATDSYITVTAHYVTEEWDLQSHVLQTRVFNASHTGANLAALLQNVLREWNITDKNPALVTDNARNMVVAGA---GADLTPHVRCVAHTLNLASQKALKMDRVSELLVKVRKVVTYFHKSPQAAEVLRE-IQSQLHLPNHKLIHDVCTRWNSSVDMLER 177          
BLAST of mRNA_H-elongata_contig88149.16339.1 vs. uniprot
Match: UPI00096AF313 (zinc finger BED domain-containing protein 1-like n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=UPI00096AF313)

HSP 1 Score: 64.3 bits (155), Expect = 1.230e-8
Identity = 57/187 (30.48%), Postives = 90/187 (48.13%), Query Frame = 0
Query:   22 KTAMMKKVSRLIKSEYVCITSDGWTSCANDTYMSLT----------VTLSVDCSKSEGTTTGDALAAGIKATVAKHGLT--GKITAVTTDYEPSMVKMGRLLEEGDVCTQIGCCNHRLESTTIVFNG---PGVKKVITLARGLVTRYSTSSQAADWLKQFVKTYLGFENKRVIQDMATRWWSTCSMV 193
            K AMM+++    ++ +   TSD WTSCAND Y+SLT          V+  +  S   G  TG  +   +K      G     ++ A+  D   +MV  G +LEE   C  + C  HRL+    + +G     + + +  A+ LVT +  S+ A+D LK+  +  +G    ++ QD  TRW ST  M+
Sbjct:  173 KRAMMQRLKN--ENAFTAFTSDIWTSCANDAYISLTAHFIDSDWQLVSCVLGSSPFPGHHTGSHIYEKLKDITHAFGFQQHSQLVALVHDAASNMVLSGEILEERLECASVCCAAHRLQ--LCIEDGLSVSAISRAVGAAKKLVTHFRHSALASDALKK-KQLDMGKPVMKLQQDCPTRWNSTFYMI 354          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig88149.16339.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7Y8_9PHAE7.970e-8277.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJV8_9PHAE2.520e-4445.81Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
D8LCS5_ECTSI1.580e-4149.51Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5JHP9_9PHAE9.270e-4050.88Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A6H5KUY5_9PHAE1.250e-3645.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVI1_9PHAE2.230e-3248.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6G0HG17_LARCR4.440e-930.39DUF659 domain-containing protein n=1 Tax=Larimicht... [more]
A0A6G0HEN4_LARCR5.250e-930.39HECT domain-containing protein n=2 Tax=Larimichthy... [more]
UPI000F601F689.320e-929.83zinc finger BED domain-containing protein 1-like n... [more]
UPI00096AF3131.230e-830.48zinc finger BED domain-containing protein 1-like n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR46169FAMILY NOT NAMEDcoord: 26..195
NoneNo IPR availablePANTHERPTHR46169:SF3coord: 26..195
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 27..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig88149contigH-elongata_contig88149:869..1453 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig88149.16339.1mRNA_H-elongata_contig88149.16339.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig88149 852..1453 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig88149.16339.1 ID=prot_H-elongata_contig88149.16339.1|Name=mRNA_H-elongata_contig88149.16339.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=195bp
MTYAQVPVSQRRNCVTTMRTVKTAMMKKVSRLIKSEYVCITSDGWTSCAN
DTYMSLTVTLSVDCSKSEGTTTGDALAAGIKATVAKHGLTGKITAVTTDY
EPSMVKMGRLLEEGDVCTQIGCCNHRLESTTIVFNGPGVKKVITLARGLV
TRYSTSSQAADWLKQFVKTYLGFENKRVIQDMATRWWSTCSMVAR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf