prot_H-elongata_contig88036.16332.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig88036.16332.1 vs. uniprot
Match: D8LML1_ECTSI (Heterogeneous nuclear ribonucleoprotein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LML1_ECTSI) HSP 1 Score: 139 bits (350), Expect = 2.350e-38 Identity = 83/110 (75.45%), Postives = 93/110 (84.55%), Query Frame = 0
Query: 1 MDYYSAIVGQLQTQNIGGVGINRQGGGLXXXXXXXXXGA-----DGMAIPAVHTGVLRMRGLPFSATKQDVMNFFQGLPVTEDTIQFVVRGDGRVTGEAFVSFPSSSDSE 105
MDYYSA+VGQLQ+QN+GG+ RQ XXXXXXXXX DGMA+P VHTGV+RMRGLPFSATKQDV+NFFQG+PVTEDTIQFVVRGDGRVTGEAFVSF S ++SE
Sbjct: 166 MDYYSAVVGQLQSQNMGGM--QRQXXXXXXXXXXXXXXXXXXXPDGMAMPVVHTGVIRMRGLPFSATKQDVLNFFQGMPVTEDTIQFVVRGDGRVTGEAFVSFSSPAESE 273
BLAST of mRNA_H-elongata_contig88036.16332.1 vs. uniprot
Match: A0A836CJZ5_9STRA (RRM domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJZ5_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 4.090e-22 Identity = 46/67 (68.66%), Postives = 56/67 (83.58%), Query Frame = 0
Query: 39 ADGMAIPAVHTGVLRMRGLPFSATKQDVMNFFQGLPVTEDTIQFVVRGDGRVTGEAFVSFPSSSDSE 105
A G A A HTGV+RMRGLPFSATK DV+NFFQGL V ++++QFVVRGDGRVTGEAFV+ S +++E
Sbjct: 126 ATGQAGTAEHTGVIRMRGLPFSATKADVVNFFQGLNVLDESVQFVVRGDGRVTGEAFVTLSSPAEAE 192
BLAST of mRNA_H-elongata_contig88036.16332.1 vs. uniprot
Match: A0A7S2V6E7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6E7_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 1.460e-17 Identity = 35/53 (66.04%), Postives = 45/53 (84.91%), Query Frame = 0
Query: 48 HTGVLRMRGLPFSATKQDVMNFFQGLPVTEDTIQFVVRGDGRVTGEAFVSFPS 100
HTG+LR+RGLPFSA+K DV++FF G + ED+I+FVVR DGRVTGE++V F S
Sbjct: 23 HTGILRLRGLPFSASKADVLHFFDGYEIVEDSIEFVVRADGRVTGESYVQFTS 75
BLAST of mRNA_H-elongata_contig88036.16332.1 vs. uniprot
Match: A0A7S3YKW9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YKW9_HETAK) HSP 1 Score: 79.7 bits (195), Expect = 4.050e-17 Identity = 34/58 (58.62%), Postives = 47/58 (81.03%), Query Frame = 0
Query: 48 HTGVLRMRGLPFSATKQDVMNFFQGLPVTEDTIQFVVRGDGRVTGEAFVSFPSSSDSE 105
HTG LR+RG PF+ATK+DV+ FF+G PV ED+I+FV R DG++TGE +V PS+ D++
Sbjct: 23 HTGYLRLRGCPFTATKRDVLGFFRGHPVVEDSIEFVRRADGKMTGEVYVRLPSAEDAK 80
BLAST of mRNA_H-elongata_contig88036.16332.1 vs. uniprot
Match: A0A833QXZ1_9POAL (Heterogeneous nuclear ribonucleoprotein F n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833QXZ1_9POAL) HSP 1 Score: 82.0 bits (201), Expect = 1.270e-16 Identity = 47/105 (44.76%), Postives = 64/105 (60.95%), Query Frame = 0
Query: 2 DYYSAIVGQLQTQNIGGVGINRQGGGLXXXXXXXXXGADGMAIP-AVHTGVLRMRGLPFSATKQDVMNFFQGLPVTEDTIQFVVRGDGRVTGEAFVSFPSSSDSE 105
DYY+AI ++ + IGG R ADG AVHTGVLRMRGLPFSATK+++M+FF+ +TE+ I V+ DGR +GEAFV F ++ +S+
Sbjct: 135 DYYTAIAQEVSSGKIGGSSPRRNA-----PPPKPKPSADGPKDDHAVHTGVLRMRGLPFSATKEEIMDFFREFELTENRIHLVLNRDGRPSGEAFVEFENAEESK 234
BLAST of mRNA_H-elongata_contig88036.16332.1 vs. uniprot
Match: UPI0010A32602 (heterogeneous nuclear ribonucleoprotein H2-like n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A32602) HSP 1 Score: 80.9 bits (198), Expect = 3.220e-16 Identity = 46/104 (44.23%), Postives = 60/104 (57.69%), Query Frame = 0
Query: 2 DYYSAIVGQLQTQNIGGVGINRQGGGLXXXXXXXXXGADGMAIPAVHTGVLRMRGLPFSATKQDVMNFFQGLPVTEDTIQFVVRGDGRVTGEAFVSFPSSSDSE 105
+YY AI ++ GG+G GGG D A HTGVLR+RGLPFSATK D+M FF+ V+ED I V+ +GR +GEA+V F S+ DS+
Sbjct: 131 EYYKAIANEVSDAR-GGIG---GGGGSPRRSASRAKSYDEGKDSAEHTGVLRLRGLPFSATKDDIMEFFKDFVVSEDCIHIVMNSEGRPSGEAYVEFASAEDSK 230
BLAST of mRNA_H-elongata_contig88036.16332.1 vs. uniprot
Match: A0A7J0H4Z3_9ERIC (RNA-binding (RRM/RBD/RNP motifs) family protein n=1 Tax=Actinidia rufa TaxID=165716 RepID=A0A7J0H4Z3_9ERIC) HSP 1 Score: 80.1 bits (196), Expect = 3.400e-16 Identity = 41/104 (39.42%), Postives = 59/104 (56.73%), Query Frame = 0
Query: 2 DYYSAIVGQLQTQNIGGVGINRQGGGLXXXXXXXXXGADGMAIPAVHTGVLRMRGLPFSATKQDVMNFFQGLPVTEDTIQFVVRGDGRVTGEAFVSFPSSSDSE 105
+YY AI ++ + GG +D A HTGVLR+RGLPFSA+K+D+M+FF+ ++ED I ++ +GR TGEAFV F S+ DS+
Sbjct: 117 EYYKAIANEVSDSH----------GGSPHRNVSRAKSSDNGKESAEHTGVLRLRGLPFSASKEDIMDFFKDFVISEDAIHIIINSEGRPTGEAFVGFASAEDSK 210
BLAST of mRNA_H-elongata_contig88036.16332.1 vs. uniprot
Match: A0A833VDL5_9POAL (Heterogeneous nuclear ribonucleoprotein F n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833VDL5_9POAL) HSP 1 Score: 79.7 bits (195), Expect = 9.050e-16 Identity = 44/105 (41.90%), Postives = 62/105 (59.05%), Query Frame = 0
Query: 2 DYYSAIVGQLQTQNIGGVGINRQGGGLXXXXXXXXXGADGMAIP-AVHTGVLRMRGLPFSATKQDVMNFFQGLPVTEDTIQFVVRGDGRVTGEAFVSFPSSSDSE 105
DYY+A+ ++ + +GG R ADG V+TG+LRMRGLPFSA K+++M+FF+ +TE ++ VV DGR +GEAFV F SS DS+
Sbjct: 132 DYYAAVAQEVSSGKVGGSSPRRTA-----PPPRPKLSADGSKDEHVVYTGILRMRGLPFSAGKEEIMDFFKDFELTEQRVRLVVNSDGRPSGEAFVEFNSSEDSK 231
BLAST of mRNA_H-elongata_contig88036.16332.1 vs. uniprot
Match: A0A7C8YU07_OPUST (Uncharacterized protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C8YU07_OPUST) HSP 1 Score: 80.5 bits (197), Expect = 1.320e-15 Identity = 34/61 (55.74%), Postives = 45/61 (73.77%), Query Frame = 0
Query: 45 PAVHTGVLRMRGLPFSATKQDVMNFFQGLPVTEDTIQFVVRGDGRVTGEAFVSFPSSSDSE 105
P HTG+LR+RGLPFSAT++D+M FF G +++D++ DGR TGEAFV F S+ DSE
Sbjct: 282 PVKHTGILRLRGLPFSATEEDIMEFFNGFVLSKDSVHITFNADGRATGEAFVEFASAEDSE 342
BLAST of mRNA_H-elongata_contig88036.16332.1 vs. uniprot
Match: A0A5K1EDJ4_9MAGN (RRM domain-containing protein (Fragment) n=2 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K1EDJ4_9MAGN) HSP 1 Score: 79.0 bits (193), Expect = 1.510e-15 Identity = 34/58 (58.62%), Postives = 45/58 (77.59%), Query Frame = 0
Query: 48 HTGVLRMRGLPFSATKQDVMNFFQGLPVTEDTIQFVVRGDGRVTGEAFVSFPSSSDSE 105
HTGVL++RGLPFSATK+D+++FF+ V+ED + V DGR TGEAFV F S+ DS+
Sbjct: 165 HTGVLKLRGLPFSATKEDILDFFKDFEVSEDNVHMVFNSDGRATGEAFVEFASAEDSK 222 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig88036.16332.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig88036.16332.1 ID=prot_H-elongata_contig88036.16332.1|Name=mRNA_H-elongata_contig88036.16332.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=107bpback to top |