prot_H-elongata_contig88013.16329.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig88013.16329.1
Unique Nameprot_H-elongata_contig88013.16329.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length103
Homology
BLAST of mRNA_H-elongata_contig88013.16329.1 vs. uniprot
Match: G3G5N9_9PHAE (Eukaryotic translation initiation factor 3 subunit 6 interacting protein (Fragment) n=93 Tax=Fucaceae TaxID=3010 RepID=G3G5N9_9PHAE)

HSP 1 Score: 190 bits (482), Expect = 8.380e-60
Identity = 96/100 (96.00%), Postives = 97/100 (97.00%), Query Frame = 0
Query:    3 QTQLFMEEVRQQLLFPQIRSYLKLYTTIGLDKIARFNDMDEEQFSAQLVSMKHKLTQMDWAMSGDASLLEGKPGFALDFNYFVEDNTVVIDEADAREQQG 102
            QTQLFMEEVRQQLLFPQIRSYLKLYTTIGLDKI+RFNDMDEEQFSAQLVSMKHKLTQMDWAMSGDASLLEGKP  ALDFNYFVEDN VVIDEADAREQQG
Sbjct:   65 QTQLFMEEVRQQLLFPQIRSYLKLYTTIGLDKISRFNDMDEEQFSAQLVSMKHKLTQMDWAMSGDASLLEGKPALALDFNYFVEDNIVVIDEADAREQQG 164          
BLAST of mRNA_H-elongata_contig88013.16329.1 vs. uniprot
Match: D7FZE6_ECTSI (Eukaryotic translation initiation factor 3 subunit L n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZE6_ECTSI)

HSP 1 Score: 183 bits (465), Expect = 1.630e-53
Identity = 90/100 (90.00%), Postives = 96/100 (96.00%), Query Frame = 0
Query:    3 QTQLFMEEVRQQLLFPQIRSYLKLYTTIGLDKIARFNDMDEEQFSAQLVSMKHKLTQMDWAMSGDASLLEGKPGFALDFNYFVEDNTVVIDEADAREQQG 102
            QTQLFMEEV+QQ+LFPQIRSYLKLYTTIGL+KIARFND+DEEQFSAQLVSMKHKLTQMDW MSGD SLLEGKP FA+DFN+FVED TVVIDEADAREQQG
Sbjct:  402 QTQLFMEEVKQQILFPQIRSYLKLYTTIGLEKIARFNDLDEEQFSAQLVSMKHKLTQMDWGMSGDTSLLEGKPSFAMDFNFFVEDKTVVIDEADAREQQG 501          
BLAST of mRNA_H-elongata_contig88013.16329.1 vs. uniprot
Match: A0A835YSE4_9STRA (Eukaryotic translation initiation factor 3 subunit L n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSE4_9STRA)

HSP 1 Score: 117 bits (294), Expect = 5.250e-29
Identity = 57/92 (61.96%), Postives = 70/92 (76.09%), Query Frame = 0
Query:    3 QTQLFMEEVRQQLLFPQIRSYLKLYTTIGLDKIARFNDMDEEQFSAQLVSMKHKLTQMDWAMSGDASLLEGKPGFALDFNYFVEDNTVVIDE 94
            Q QLF  E+ QQL FP++RSYLKLY TI + K+ARFN M E  + A LVSMKHKLTQ++W M+ + S L GK   AL+FNYFVED+T+VIDE
Sbjct:  359 QVQLFCHEMSQQLAFPKVRSYLKLYATISIAKMARFNGMSEADYLATLVSMKHKLTQLEWGMNSETSPLTGKLALALEFNYFVEDDTIVIDE 450          
BLAST of mRNA_H-elongata_contig88013.16329.1 vs. uniprot
Match: A0A4P9WFR2_9FUNG (Translation initiation factor 3 complex subunit L (Fragment) n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9WFR2_9FUNG)

HSP 1 Score: 77.8 bits (190), Expect = 1.410e-14
Identity = 40/93 (43.01%), Postives = 60/93 (64.52%), Query Frame = 0
Query:    3 QTQLFMEEVRQQLLFPQIRSYLKLYTTIGLDKIARFNDMDEEQFSAQLVSMKHKLTQMDWAMSGDASLLEGKPGFALDFNYFVEDNTVVIDEA 95
            Q ++F+ EVR QLL P IRS+LKLYTT+G+DK+A F D+  ++   QL+  KHK  Q  W      S+LEG+ G A D ++++  + + I E+
Sbjct:  375 QLKIFLSEVRTQLLVPTIRSFLKLYTTLGVDKLATFLDVSPDEVRMQLLVFKHKTRQRRWE---SGSVLEGEFGSASDLDFYLRQDLIYIAES 464          
BLAST of mRNA_H-elongata_contig88013.16329.1 vs. uniprot
Match: A0A6S7HGR6_PARCT (Eukaryotic translation initiation factor 3 subunit L n=3 Tax=Alcyonacea TaxID=40677 RepID=A0A6S7HGR6_PARCT)

HSP 1 Score: 77.0 bits (188), Expect = 2.710e-14
Identity = 42/96 (43.75%), Postives = 62/96 (64.58%), Query Frame = 0
Query:    7 FMEEVRQQLLFPQIRSYLKLYTTIGLDKIARFNDMDEEQFSAQLVSMKHKLTQMDWAMSGDASLLEGKPGFALDFNYFVEDNTVVIDEADAREQQG 102
            F++E+RQQ L P IRSYLKLYTT+ + K+A F DMDEE    QL+  KHK   + W    DA  LEG+   + D ++++E++ + I  AD + ++G
Sbjct:  425 FLQEMRQQSLIPIIRSYLKLYTTMPITKLAAFLDMDEETLRTQLLCYKHKQRHLTWTKGPDA--LEGEFQSSSDVDFYIENDMIHI--ADTKVERG 516          
BLAST of mRNA_H-elongata_contig88013.16329.1 vs. uniprot
Match: A0A7S2UHH8_9STRA (Eukaryotic translation initiation factor 3 subunit L n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UHH8_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 3.700e-14
Identity = 46/103 (44.66%), Postives = 63/103 (61.17%), Query Frame = 0
Query:    3 QTQLFMEEVRQQLLFPQIRSYLKLYTTIGLDKIARFNDMDEEQFSAQLVSMKHKLTQMDWAMS--GDASL-------LEGKPGFALDFNYFVEDNTVVIDEAD 96
            Q Q FM E+  Q    ++RSY+KLYT+I + K+A FNDM E +F   LVS KHK+ QM+   +  GD SL       L GK G ALD +Y++ +  V +DEA+
Sbjct:  417 QVQHFMTEMSAQQTMRKLRSYMKLYTSISVGKLAAFNDMTEAEFLPLLVSYKHKMRQMERTTNTEGDDSLAAATDGPLGGKLGTALDIHYYIVNEMVHVDEAE 519          
BLAST of mRNA_H-elongata_contig88013.16329.1 vs. uniprot
Match: UPI001425895B (eukaryotic translation initiation factor 3 subunit L-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425895B)

HSP 1 Score: 76.3 bits (186), Expect = 5.050e-14
Identity = 39/92 (42.39%), Postives = 63/92 (68.48%), Query Frame = 0
Query:    1 MRQTQLFMEEVRQQLLFPQIRSYLKLYTTIGLDKIARFNDMDEEQFSAQLVSMKHKLTQMDWAMSGDASLLEGKPGFALDFNYFVEDNTVVI 92
            M QT++F+EEVRQQLL P+IRS+LKLYTT+ + K+A F ++ EE+F  Q +  KHK+  + W     +S L+G+   A + +++V+ + + I
Sbjct:  417 MLQTKVFLEEVRQQLLIPEIRSFLKLYTTMPIPKLAAFLNLSEEEFRTQFLCFKHKMMNLVWTKG--SSGLDGEFQAASEVDFYVDGDMIHI 506          
BLAST of mRNA_H-elongata_contig88013.16329.1 vs. uniprot
Match: UPI001F03A68F (eukaryotic translation initiation factor 3 subunit L-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F03A68F)

HSP 1 Score: 75.9 bits (185), Expect = 6.680e-14
Identity = 42/96 (43.75%), Postives = 60/96 (62.50%), Query Frame = 0
Query:    7 FMEEVRQQLLFPQIRSYLKLYTTIGLDKIARFNDMDEEQFSAQLVSMKHKLTQMDWAMSGDASLLEGKPGFALDFNYFVEDNTVVIDEADAREQQG 102
            F++E+RQQ L P IRSYLKLY T+ L K+A F DMDEE    QL+  KHK     W    DA  LEG+   + D ++++E++ + I  AD + ++G
Sbjct:  361 FLQEMRQQSLIPTIRSYLKLYKTMPLSKLAAFLDMDEETLRTQLLCYKHKQRHFTWTKGPDA--LEGEFQSSSDVDFYIENDMIHI--ADTKVERG 452          
BLAST of mRNA_H-elongata_contig88013.16329.1 vs. uniprot
Match: A0A2B4RG74_STYPI (Eukaryotic translation initiation factor 3 subunit L n=3 Tax=Scleractinia TaxID=6125 RepID=A0A2B4RG74_STYPI)

HSP 1 Score: 74.7 bits (182), Expect = 1.750e-13
Identity = 40/100 (40.00%), Postives = 60/100 (60.00%), Query Frame = 0
Query:    3 QTQLFMEEVRQQLLFPQIRSYLKLYTTIGLDKIARFNDMDEEQFSAQLVSMKHKLTQMDWAMSGDASLLEGKPGFALDFNYFVEDNTVVIDEADAREQQG 102
            Q ++FM EV QQ L P IRSYLKLYTT+ + K+A F DMD+ QF  QL+  KHK   + W    DA  LEG+   + + +++++ + + I +     + G
Sbjct:  417 QLKVFMNEVSQQSLIPVIRSYLKLYTTMPIAKLAAFLDMDKSQFRTQLLCFKHKQRNLVWTKGTDA--LEGELQSSSEVDFYIDQDMIHIADTKVERRYG 514          
BLAST of mRNA_H-elongata_contig88013.16329.1 vs. uniprot
Match: UPI000C7822EE (eukaryotic translation initiation factor 3 subunit L-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C7822EE)

HSP 1 Score: 74.3 bits (181), Expect = 2.380e-13
Identity = 39/100 (39.00%), Postives = 62/100 (62.00%), Query Frame = 0
Query:    3 QTQLFMEEVRQQLLFPQIRSYLKLYTTIGLDKIARFNDMDEEQFSAQLVSMKHKLTQMDWAMSGDASLLEGKPGFALDFNYFVEDNTVVIDEADAREQQG 102
            Q ++FMEEV+QQL+ P IRSYLKLYTT+ LDK+A F +M  E+F   +++ KHK+  + W      S LEG+     + +++++ N + I +     + G
Sbjct:  397 QLKVFMEEVQQQLMLPTIRSYLKLYTTMPLDKMAGFMEMPSEEFRNHVLAFKHKMRNVVWTKG--TSGLEGEFQSGSEVDFYIDKNMIHIADTKVARRYG 494          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig88013.16329.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
G3G5N9_9PHAE8.380e-6096.00Eukaryotic translation initiation factor 3 subunit... [more]
D7FZE6_ECTSI1.630e-5390.00Eukaryotic translation initiation factor 3 subunit... [more]
A0A835YSE4_9STRA5.250e-2961.96Eukaryotic translation initiation factor 3 subunit... [more]
A0A4P9WFR2_9FUNG1.410e-1443.01Translation initiation factor 3 complex subunit L ... [more]
A0A6S7HGR6_PARCT2.710e-1443.75Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2UHH8_9STRA3.700e-1444.66Eukaryotic translation initiation factor 3 subunit... [more]
UPI001425895B5.050e-1442.39eukaryotic translation initiation factor 3 subunit... [more]
UPI001F03A68F6.680e-1443.75eukaryotic translation initiation factor 3 subunit... [more]
A0A2B4RG74_STYPI1.750e-1340.00Eukaryotic translation initiation factor 3 subunit... [more]
UPI000C7822EE2.380e-1339.00eukaryotic translation initiation factor 3 subunit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019382Translation initiation factor 3 complex subunit LPFAMPF10255Paf67coord: 2..99
e-value: 4.9E-26
score: 91.7
IPR019382Translation initiation factor 3 complex subunit LPANTHERPTHR13242EUKARYOTIC TRANSLATION INITIATION FACTOR 3coord: 2..98
NoneNo IPR availablePANTHERPTHR13242:SF0EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Lcoord: 2..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig88013contigH-elongata_contig88013:969..2153 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig88013.16329.1mRNA_H-elongata_contig88013.16329.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig88013 969..2153 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig88013.16329.1 ID=prot_H-elongata_contig88013.16329.1|Name=mRNA_H-elongata_contig88013.16329.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=103bp
MRQTQLFMEEVRQQLLFPQIRSYLKLYTTIGLDKIARFNDMDEEQFSAQL
VSMKHKLTQMDWAMSGDASLLEGKPGFALDFNYFVEDNTVVIDEADAREQ
QG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019382eIF3l