prot_H-elongata_contig88004.16328.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig88004.16328.1
Unique Nameprot_H-elongata_contig88004.16328.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length102
Homology
BLAST of mRNA_H-elongata_contig88004.16328.1 vs. uniprot
Match: A0A6H5KMD6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMD6_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 1.580e-34
Identity = 67/102 (65.69%), Postives = 82/102 (80.39%), Query Frame = 0
Query:    1 QILYGIFLPSLLMVNVAKTCVSQPLASLLPIPVFAAVQVVVGIIATTAGMRLLNIDSNTENGRTTKVCGIFQNSAILPLIFMNALFRGSPEKLTQGIAYVRY 102
            +I+YGIFLPSLLMVNVAKTCVSQ +ASLLPIP FA +QV +G+  +   MRLL I+ +TE GR  KVC  FQNS ILPLIF+NA+FRGSPE L++G+AY  +
Sbjct:  176 KIVYGIFLPSLLMVNVAKTCVSQSVASLLPIPAFAGIQVALGLAISEVAMRLLRINPDTEAGREAKVCMAFQNSGILPLIFLNAMFRGSPELLSRGVAYASF 277          
BLAST of mRNA_H-elongata_contig88004.16328.1 vs. uniprot
Match: A0A836CLT3_9STRA (Auxin efflux carrier n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLT3_9STRA)

HSP 1 Score: 105 bits (263), Expect = 5.310e-25
Identity = 55/104 (52.88%), Postives = 74/104 (71.15%), Query Frame = 0
Query:    1 QILYGIFLPSLLMVNVAKTCVSQPLASLLPIPVFAAVQVVVGIIATTAGMRLLNIDSNTENGRTTKVCGIFQNSAILPLIFMNALFRGSPEK--LTQGIAYVRY 102
            QI+Y IFLPSLL+VNVA+T +SQPL++LLPIP+FA  Q+ +G       M++L I+  TE GR  +VC  F NS ILPL+F+NALFR  P+   L + IAY+ +
Sbjct:   47 QIVYNIFLPSLLLVNVAETAISQPLSTLLPIPLFAWAQIFIGYKIARLTMKVLRIEPTTEEGREVQVCSAFGNSGILPLLFVNALFRAHPDPTVLPRAIAYISF 150          
BLAST of mRNA_H-elongata_contig88004.16328.1 vs. uniprot
Match: A0A7S3XRL6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRL6_HETAK)

HSP 1 Score: 77.8 bits (190), Expect = 8.640e-16
Identity = 38/88 (43.18%), Postives = 59/88 (67.05%), Query Frame = 0
Query:    4 YGIFLPSLLMVNVAKTCVSQPLASLLPIPVFAAVQVVVGIIATTAGMRLLNIDSNTENGRTTKVCGIFQNSAILPLIFMNALFRGSPE 91
            Y +FLP+LL+VNVA T  SQ + +LLP+P+ A +Q+++ +       +LL I+  +  GR   VC  F N+ +LP++F+NALFRG P+
Sbjct:   27 YSLFLPALLLVNVANTVASQSILTLLPLPLMAMLQIILVMGCANLLAKLLGIERASYEGRVFNVCSSFGNAGLLPMLFVNALFRGHPD 114          
BLAST of mRNA_H-elongata_contig88004.16328.1 vs. uniprot
Match: W7TA92_9STRA (Auxin efflux carrier-like protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TA92_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 8.450e-11
Identity = 38/104 (36.54%), Postives = 58/104 (55.77%), Query Frame = 0
Query:    1 QILYGIFLPSLLMVNVAKTCVSQPLASLLPIPVFAAVQVVVGIIATTAGMRLLNIDSNTENGRTTKVCGIFQNSAILPLIFMNALFRGSPEK--LTQGIAYVRY 102
             I+Y I LPSLL+VNVAKT  + PL +LLP+P+F  +Q+++          L+  D N+  GR  +V   F N  + P++F   L R  P+   L   I+Y+ +
Sbjct:  148 SIVYHILLPSLLVVNVAKTVYTTPLRTLLPLPLFGTMQILLCSCIAWVVTFLMGADVNSAKGRQLRVLQTFGNGGVAPILFATVLLRNHPDPSVLPLAISYISF 251          
BLAST of mRNA_H-elongata_contig88004.16328.1 vs. uniprot
Match: A0A4D9CQA1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQA1_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 8.770e-11
Identity = 38/104 (36.54%), Postives = 58/104 (55.77%), Query Frame = 0
Query:    1 QILYGIFLPSLLMVNVAKTCVSQPLASLLPIPVFAAVQVVVGIIATTAGMRLLNIDSNTENGRTTKVCGIFQNSAILPLIFMNALFRGSPEK--LTQGIAYVRY 102
             I+Y I LPSLL+VNVAKT  + PL +LLP+P+F  +Q+++          L+  D N+  GR  +V   F N  + P++F   L R  P+   L   I+Y+ +
Sbjct:   85 SIVYHILLPSLLVVNVAKTVYTTPLRTLLPLPLFGTMQILLCSCIAWVVTFLMGADVNSAKGRQLRVLQTFGNGGVAPILFATVLLRNHPDPSVLPLAISYISF 188          
BLAST of mRNA_H-elongata_contig88004.16328.1 vs. uniprot
Match: A0A7S2SS74_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SS74_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 4.560e-6
Identity = 35/106 (33.02%), Postives = 62/106 (58.49%), Query Frame = 0
Query:    1 QILYGIFLPSLLMVNVAKTCVS--QPLASLLPIPVFAAVQVVVGIIATTAGMRLLNIDSNTENGRTTKVCGIFQNSAILPLIFMNALFRG--SPEKLTQGIAYVRY 102
            ++++ IF P+LL VNVA T  +  Q L++L  IP+FA  Q+ VG +  +  + +L +   +  GR  ++   F NS  LPL+F ++LF G   P   ++ +A++ +
Sbjct:  121 RLIFFIFQPALLCVNVATTLSTPGQSLSTLGIIPLFALSQIAVGSLVGSLLLAVLRVPRESIPGRELRMSCAFGNSGPLPLLFADSLFAGRADPTMASRAVAFISF 226          
BLAST of mRNA_H-elongata_contig88004.16328.1 vs. uniprot
Match: A0A7S2UVM5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVM5_9STRA)

HSP 1 Score: 48.5 bits (114), Expect = 6.050e-5
Identity = 22/71 (30.99%), Postives = 42/71 (59.15%), Query Frame = 0
Query:   34 FAAVQVVVGIIATTAGMRLLNIDSNTENGRTTKVCGIFQNSAILPLIFMNALFRGSPEK--LTQGIAYVRY 102
            F  + + V ++A+    R++ +D+ ++ GR    C  F N  ILPL+F++ALFR  P+   L + ++Y+ +
Sbjct:    2 FPIIAISVALLASNLLARVMKMDTKSQEGRNFLACCTFSNCGILPLLFVDALFRNHPDPSLLPKAVSYISF 72          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig88004.16328.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5KMD6_9PHAE1.580e-3465.69Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CLT3_9STRA5.310e-2552.88Auxin efflux carrier n=1 Tax=Tribonema minus TaxID... [more]
A0A7S3XRL6_HETAK8.640e-1643.18Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
W7TA92_9STRA8.450e-1136.54Auxin efflux carrier-like protein n=2 Tax=Nannochl... [more]
A0A4D9CQA1_9STRA8.770e-1136.54Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2SS74_9STRA4.560e-633.02Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2UVM5_9STRA6.050e-530.99Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 54..102
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 32..53
NoneNo IPR availableTMHMMTMhelixcoord: 33..55
NoneNo IPR availableTMHMMTMhelixcoord: 67..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig88004contigH-elongata_contig88004:1225..2488 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig88004.16328.1mRNA_H-elongata_contig88004.16328.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig88004 1225..2488 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig88004.16328.1 ID=prot_H-elongata_contig88004.16328.1|Name=mRNA_H-elongata_contig88004.16328.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=102bp
QILYGIFLPSLLMVNVAKTCVSQPLASLLPIPVFAAVQVVVGIIATTAGM
RLLNIDSNTENGRTTKVCGIFQNSAILPLIFMNALFRGSPEKLTQGIAYV
RY
back to top