prot_H-elongata_contig87923.16324.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig87923.16324.1
Unique Name	prot_H-elongata_contig87923.16324.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	103

Homology

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BLAST of mRNA_H-elongata_contig87923.16324.1 vs. uniprot
Match: D8LDY9_ECTSI (Channel voltage activated chloride channel (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDY9_ECTSI)

HSP 1 Score: 202 bits (515), Expect = 7.970e-65
Identity = 93/102 (91.18%), Postives = 101/102 (99.02%), Query Frame = 0

Query:    1 MQYVLPLMLTLMAARWVGNVFNEGLYDIYIHGNKLPFLEDECPGVAKKNDMTASQAMSRRVRCLRPMERAGAVFDTLSACEHDCFPVVDDQGGDVLVGTILR 102
            MQYVLPLMLTLMAARWVGNVFNEGLYD++IHGNKLPFLEDECP VA++NDMTASQAMSRRVRCLRP+ERAGAVFDTL+AC+HDCFPVVDD+GGDVLVGTILR
Sbjct:    1 MQYVLPLMLTLMAARWVGNVFNEGLYDMHIHGNKLPFLEDECPSVARQNDMTASQAMSRRVRCLRPLERAGAVFDTLNACQHDCFPVVDDEGGDVLVGTILR 102

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BLAST of mRNA_H-elongata_contig87923.16324.1 vs. uniprot
Match: A0A836CAG3_9STRA (Chloride channel protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAG3_9STRA)

HSP 1 Score: 150 bits (379), Expect = 2.560e-40
Identity = 70/102 (68.63%), Postives = 82/102 (80.39%), Query Frame = 0

Query:    1 MQYVLPLMLTLMAARWVGNVFNEGLYDIYIHGNKLPFLEDECPGVAKKNDMTASQAMSRRVRCLRPMERAGAVFDTLSACEHDCFPVVDDQGGDVLVGTILR 102
            MQYVLPLMLTLMAARW GNVFNEGLYDI+I   +LPFLEDE P +A K ++TA Q M+  V+CLRP+ER G V+D L   EHDCFPVVD Q G+VL+GT+LR
Sbjct:  452 MQYVLPLMLTLMAARWTGNVFNEGLYDIHIRLKRLPFLEDELPALAAKGEVTAGQIMTTTVKCLRPIERVGYVYDALRNTEHDCFPVVDTQTGNVLMGTVLR 553

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BLAST of mRNA_H-elongata_contig87923.16324.1 vs. uniprot
Match: A0A7S2YMG2_9STRA (Chloride channel protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YMG2_9STRA)

HSP 1 Score: 134 bits (338), Expect = 1.400e-34
Identity = 61/102 (59.80%), Postives = 76/102 (74.51%), Query Frame = 0

Query:    1 MQYVLPLMLTLMAARWVGNVFNEGLYDIYIHGNKLPFLEDECPGVAKKNDMTASQAMSRRVRCLRPMERAGAVFDTLSACEHDCFPVVDDQGGDVLVGTILR 102
            MQYVLPLM+TLMAAR+ GNVFNEGLYDI+IH   +PFLE + P VA++N++ + Q MS  V+CLRP+ERAG V+D L +C H  FP+VD   G  L GT  R
Sbjct:  491 MQYVLPLMITLMAARFTGNVFNEGLYDIHIHLKHIPFLEPDVPSVAERNEIVSGQVMSTEVKCLRPVERAGVVYDLLRSCSHGTFPIVDTASGGTLYGTASR 592

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BLAST of mRNA_H-elongata_contig87923.16324.1 vs. uniprot
Match: A0A7S1D5H2_CYCTE (Chloride channel protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D5H2_CYCTE)

HSP 1 Score: 132 bits (332), Expect = 1.700e-34
Identity = 61/102 (59.80%), Postives = 75/102 (73.53%), Query Frame = 0

Query:    1 MQYVLPLMLTLMAARWVGNVFNEGLYDIYIHGNKLPFLEDECPGVAKKNDMTASQAMSRRVRCLRPMERAGAVFDTLSACEHDCFPVVDDQGGDVLVGTILR 102
            MQYVLPLMLTLMAAR+ GNVFNEGLYDI+I    +PFLE E P +A+++++ A Q MS  V+CLRP+ERAG V+D L +C H  FP+VD   G  L GT  R
Sbjct:  193 MQYVLPLMLTLMAARFTGNVFNEGLYDIHIKLKNIPFLEPEVPSIAERHEIVAGQVMSAEVKCLRPVERAGVVYDLLRSCSHGTFPIVDTASGGTLYGTASR 294

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BLAST of mRNA_H-elongata_contig87923.16324.1 vs. uniprot
Match: A0A7S0UJS8_9STRA (Chloride channel protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UJS8_9STRA)

HSP 1 Score: 132 bits (333), Expect = 6.760e-34
Identity = 59/102 (57.84%), Postives = 76/102 (74.51%), Query Frame = 0

Query:    1 MQYVLPLMLTLMAARWVGNVFNEGLYDIYIHGNKLPFLEDECPGVAKKNDMTASQAMSRRVRCLRPMERAGAVFDTLSACEHDCFPVVDDQGGDVLVGTILR 102
            MQYVLPLM+ LM+AR+ GNVFNEGLYDI+IH   +PF+E E P +A++N++ A Q MS  V+CLRP+ERAG V+D L +C+H  FP+VD   G  L GT  R
Sbjct:  497 MQYVLPLMIVLMSARFTGNVFNEGLYDIHIHLKHIPFMEPEVPTIAERNEIVAGQVMSAEVKCLRPVERAGVVYDLLRSCQHGTFPIVDTASGGTLYGTASR 598

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BLAST of mRNA_H-elongata_contig87923.16324.1 vs. uniprot
Match: A0A7S2XUS9_9STRA (Chloride channel protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUS9_9STRA)

HSP 1 Score: 132 bits (331), Expect = 8.930e-34
Identity = 59/102 (57.84%), Postives = 78/102 (76.47%), Query Frame = 0

Query:    1 MQYVLPLMLTLMAARWVGNVFNEGLYDIYIHGNKLPFLEDECPGVAKKNDMTASQAMSRRVRCLRPMERAGAVFDTLSACEHDCFPVVDDQGGDVLVGTILR 102
            MQYV+PLM+TLMAARWVGNVF   LY I+IH  +LP+LE++    A+ NDM A+Q M + VRCLRP+E+ G ++D L++ +H CFPVVD   G VLVG++LR
Sbjct:  382 MQYVVPLMITLMAARWVGNVFTPSLYHIHIHLKRLPYLEEDVDRPARMNDMIANQVMCKDVRCLRPVEKVGVIYDLLTSTQHHCFPVVDQGRGGVLVGSVLR 483

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BLAST of mRNA_H-elongata_contig87923.16324.1 vs. uniprot
Match: A0A1Z5JAK4_FISSO (Chloride channel protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JAK4_FISSO)

HSP 1 Score: 132 bits (331), Expect = 1.380e-33
Identity = 61/102 (59.80%), Postives = 75/102 (73.53%), Query Frame = 0

Query:    1 MQYVLPLMLTLMAARWVGNVFNEGLYDIYIHGNKLPFLEDECPGVAKKNDMTASQAMSRRVRCLRPMERAGAVFDTLSACEHDCFPVVDDQGGDVLVGTILR 102
            MQYVLPLMLTLMAAR+ GNVFNEGLYDI+IH   +PFLE + P +A+++++ A Q MS  V+CLRP+ERAG V+D L  C H  FP+VD   G  L GT  R
Sbjct:  620 MQYVLPLMLTLMAARFTGNVFNEGLYDIHIHLKNIPFLEPDVPPIAERSEIVAGQVMSTEVKCLRPVERAGVVYDLLQQCGHGTFPIVDMASGGTLYGTASR 721

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BLAST of mRNA_H-elongata_contig87923.16324.1 vs. uniprot
Match: A0A1E7FXI3_9STRA (Chloride channel protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FXI3_9STRA)

HSP 1 Score: 131 bits (330), Expect = 1.830e-33
Identity = 59/102 (57.84%), Postives = 75/102 (73.53%), Query Frame = 0

Query:    1 MQYVLPLMLTLMAARWVGNVFNEGLYDIYIHGNKLPFLEDECPGVAKKNDMTASQAMSRRVRCLRPMERAGAVFDTLSACEHDCFPVVDDQGGDVLVGTILR 102
            MQY LPLM+ LM+AR+ GNVFNEGLYDI+IH   +PF+E E P VA++N++ A Q MS  V+CLRP+ERAG V+D L +C+H  FP+VD   G  L GT  R
Sbjct:  553 MQYTLPLMIVLMSARFTGNVFNEGLYDIHIHLKHIPFMEPEVPPVAERNEIVAGQVMSAEVKCLRPVERAGVVYDLLRSCQHGTFPIVDTASGGTLYGTASR 654

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BLAST of mRNA_H-elongata_contig87923.16324.1 vs. uniprot
Match: A0A7R9ZRT7_9STRA (Chloride channel protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZRT7_9STRA)

HSP 1 Score: 124 bits (311), Expect = 1.750e-32
Identity = 57/102 (55.88%), Postives = 73/102 (71.57%), Query Frame = 0

Query:    1 MQYVLPLMLTLMAARWVGNVFNEGLYDIYIHGNKLPFLEDECPGVAKKNDMTASQAMSRRVRCLRPMERAGAVFDTLSACEHDCFPVVDDQGGDVLVGTILR 102
            MQYVLPLML LM+AR+ GNVFNEGLYDI+IH   +PF+E E P +A+++++ A Q MS +V+CLRP+ERAG V+  L    H  FP+VD   G  L GT  R
Sbjct:   76 MQYVLPLMLVLMSARFTGNVFNEGLYDIHIHLKHIPFMEPEVPPIAERHEIVAGQVMSTKVKCLRPVERAGLVYQLLKESSHGTFPIVDAASGGTLYGTASR 177

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BLAST of mRNA_H-elongata_contig87923.16324.1 vs. uniprot
Match: A0A7S2CPI8_9STRA (Chloride channel protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CPI8_9STRA)

HSP 1 Score: 124 bits (312), Expect = 2.760e-31
Identity = 61/102 (59.80%), Postives = 75/102 (73.53%), Query Frame = 0

Query:    1 MQYVLPLMLTLMAARWVGNVFNEGLYDIYIHGNKLPFLEDECPGVAKKNDMTASQAMSRRVRCLRPMERAGAVFDTLSACEHDCFPVVDDQGGDVLVGTILR 102
            MQYVLPLML LMAAR+VGN+FN GLYDI+I   ++PFLE + P  A   ++TA   MS     ++PM R GA+   LS+C+HDCFPVVD Q GD+LVGTILR
Sbjct:  267 MQYVLPLMLALMAARFVGNMFNAGLYDIHIKLKRIPFLEGDLPIDALDAELTAGHVMSSGCVTMQPMMRVGALQSILSSCDHDCFPVVDPQRGDILVGTILR 368

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig87923.16324.1 vs. uniprot

BLAST of mRNA_H-elongata_contig87923.16324.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LDY9_ECTSI	7.970e-65	91.18	Channel voltage activated chloride channel (Partia...	[more]
A0A836CAG3_9STRA	2.560e-40	68.63	Chloride channel protein n=1 Tax=Tribonema minus T...	[more]
A0A7S2YMG2_9STRA	1.400e-34	59.80	Chloride channel protein n=1 Tax=Amphiprora paludo...	[more]
A0A7S1D5H2_CYCTE	1.700e-34	59.80	Chloride channel protein n=1 Tax=Cyclophora tenuis...	[more]
A0A7S0UJS8_9STRA	6.760e-34	57.84	Chloride channel protein n=1 Tax=Pseudo-nitzschia ...	[more]
A0A7S2XUS9_9STRA	8.930e-34	57.84	Chloride channel protein n=1 Tax=Fibrocapsa japoni...	[more]
A0A1Z5JAK4_FISSO	1.380e-33	59.80	Chloride channel protein n=2 Tax=Fistulifera solar...	[more]
A0A1E7FXI3_9STRA	1.830e-33	57.84	Chloride channel protein n=1 Tax=Fragilariopsis cy...	[more]
A0A7R9ZRT7_9STRA	1.750e-32	55.88	Chloride channel protein n=1 Tax=Craspedostauros a...	[more]
A0A7S2CPI8_9STRA	2.760e-31	59.80	Chloride channel protein n=2 Tax=Dictyocha speculu...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.580.10		coord: 46..102 e-value: 2.8E-6 score: 29.2
None	No IPR available	PANTHER	PTHR11689	CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER	coord: 1..102
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..22
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..14
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 15..22
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 23..102
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..22 score: 0.451
None	No IPR available	SUPERFAMILY	54631	CBS-domain pair	coord: 47..102
IPR014743	Chloride channel, core	GENE3D	1.10.3080.10		coord: 1..39 e-value: 5.4E-8 score: 34.1
IPR014743	Chloride channel, core	SUPERFAMILY	81340	Clc chloride channel	coord: 2..40

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig87923	contig	H-elongata_contig87923:812..1120 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig87923.16324.1	mRNA_H-elongata_contig87923.16324.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig87923 812..1147 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig87923.16324.1 ID=prot_H-elongata_contig87923.16324.1|Name=mRNA_H-elongata_contig87923.16324.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=103bp
MQYVLPLMLTLMAARWVGNVFNEGLYDIYIHGNKLPFLEDECPGVAKKND
MTASQAMSRRVRCLRPMERAGAVFDTLSACEHDCFPVVDDQGGDVLVGTI
LR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR014743	Cl-channel_core