mRNA_H-elongata_contig879.16319.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig879.16319.1
Unique NamemRNA_H-elongata_contig879.16319.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig879.16319.1 vs. uniprot
Match: D8LJN1_ECTSI (Rhomboid domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJN1_ECTSI)

HSP 1 Score: 343 bits (881), Expect = 1.790e-108
Identity = 209/436 (47.94%), Postives = 270/436 (61.93%), Query Frame = 2
Query:  458 MAPGL----RGGMQNFGSGRG-----RHRNPWFIVLGLQLVQKIVDLPRKPPLTLALMAGMTALHLAPEVVNNFLGTGPAVGGLGGFLAESYRRWVSNGYSNHIQELCLLPASMLEAYQRTGALGFRRFFLSAFLHGSERHLYYNMWSFLLKGVSLELDMGTRAYFGLLAFCLVTSQALFLVASWIMLVVFEQPSAMYACTVGFSGVIFALKYVLNRRSPAYTRVMGFKIHTRYAAWLELVLIQFMVPNASFLGHLCGIFAGILYVEVPAVASALNL-VAVSVFGNPRP-SYTYSSGSTGSRAPTSARDGDMRRHGSGSASGIARRVQTAHSSAFAGD---EAEEAAFQEALRRSMLDTGPRGANGAGSTRGEQGRMGHG---------GDTPITNVESYRVTPSAPSEEVEWSVESEGGTGIGTAELRRRRLQRM 1696
            + PGL    RGGM+++G         + R PW ++L L+LV +I  L  KPPLTLALMAGM+ALHL P++  +  G         G    S   W++ G+ +HI+ +CLLPAS+L+ Y+RTG +  RR  +S F+HG + HLYYNM SFLLKGVSLEL MGT+A+ GLL+F L+ SQ L ++++W++LVVF+ PS M+AC VGFSGV+FALKYVL+RRSP  T VMGF +HTRYA WLELVLI  MVPNASFLGHLCGI AG+LYVEVP V   +NL   +S++ N R  SYTY+SG++G  +P  AR                R+      +A+  D   EAEEAA QEALRRS+LD+  RG     + R + G              GD  +   E     P+AP  E        GG  I   ELRRRRL+R+
Sbjct:    4 LGPGLGRLPRGGMRDYGGXXXXXXXXQRRRPWALILALRLVHQISQLQHKPPLTLALMAGMSALHLKPDIFKDLFGRK-------GVFEWS---WLTGGF-DHIRNVCLLPASILDTYERTGEVEIRRLLMSPFVHGDDMHLYYNMASFLLKGVSLELTMGTQAFAGLLSFSLLASQTLMMLSAWVLLVVFDVPSPMHACAVGFSGVLFALKYVLSRRSPGVTSVMGFSVHTRYATWLELVLISVMVPNASFLGHLCGILAGVLYVEVPIVLRVVNLFTGISLYNNRRGRSYTYNSGTSGRASPEGARR-------------ETRQQSPNPPAAYDIDSDPEAEEAALQEALRRSLLDS-TRGGGAGDNLRRDNGNSAADNPGSRSRPIGDDAVAATEFLGPAPTAPPPEENAGGYGAGGGEIAPDELRRRRLRRL 414          
BLAST of mRNA_H-elongata_contig879.16319.1 vs. uniprot
Match: A0A024TVC7_9STRA (Rhomboid domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TVC7_9STRA)

HSP 1 Score: 162 bits (411), Expect = 9.720e-42
Identity = 108/306 (35.29%), Postives = 153/306 (50.00%), Query Frame = 2
Query:  476 GGMQNFGSGRGRHRNPWFIVLGLQLVQKIVDLPRKPPLTLALMAGMTALHLAPEVVNNFLGTGPAVGGLGGFLAESYRRWVSNGYSNH-----IQELCLLPASMLEAYQRTGALGFRRFFLSAFLHGSERHLYYNMWSFLLKGVSLELDMGTRAYFGLLAFCLVTSQALFLVASWIMLVVFEQPSAMYACTVGFSGVIFALKYVLNRRSPAYTRVMGFKIHTRYAAWLELVLIQFMVPNASFLGHLCGIFAGILYV----EVPAVASALNLVAVSVFGNPRPSYTYSSGSTGSRAPTSARDGDMRR 1366
            G M     GRG   N   ++L +QL+ +I  L RKPP+TL LM GM  L L                                 Y  H      ++  L P  ++E Y  +      R  +SAFLH  E HLY NM SFL KGV LE  +G+  +  ++   LV S  L +V ++I+       S ++ C +GFS V+FALK VLN+RSP Y+ ++G    T+YAAW+ELV + + VP +SF+GH+ GI AG LY+     VP  A+ +        G  RP+YTY+SG   +  P++  D +  R
Sbjct:    8 GNMPRHPGGRGLRNNGVLLMLAMQLLGQIQQLERKPPVTLLLMGGMVGLFL---------------------------------YQGHPGIPTARKYALCPDIIVEKYALS------RLIVSAFLHVDEWHLYNNMASFLWKGVQLEFHVGSERFARMIGVLLVMSHVLAVVVAYILSTFMGNSSYIHQCAIGFSAVLFALKVVLNQRSPTYSTILGISFPTKYAAWVELVYLHYFVPGSSFVGHIAGIAAGYLYLYGLSAVPTRATTIP------GGTRRPAYTYASGRATNSTPSTESDEEYAR 268          
BLAST of mRNA_H-elongata_contig879.16319.1 vs. uniprot
Match: A0A813AIL7_9DINO (RBL14 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813AIL7_9DINO)

HSP 1 Score: 157 bits (398), Expect = 8.490e-41
Identity = 96/230 (41.74%), Postives = 125/230 (54.35%), Query Frame = 2
Query:  545 QLVQKIVDLPRKPPLTLALMAGMTALHLAPEVVNNFLGTGPAVGGLGGFLAESYRRWVSNGYSNHIQELCLLPASMLEAYQRTGALGFRRFFLSAFLHGSERHLYYNMWSFLLKGVSLELDMGTRAYFGLLAFCLVTSQALFLVASWIMLVVFEQPSAMYACTVGFSGVIFALKYVLNRRSPAYTRVMGFKIHTRYAAWLELVLIQFMVPNASFLGHLCGIFAGILYVEV 1234
            QL  +I +LP KPPLTLALM     +H +P                           +S G    +Q  CL PA+M+   Q    L       S FLHG + HLYYNM S L KGV +E  MG  ++  ++AF  V SQAL++   W+ L          +C VGFSGV+F LK +LN  SP  T V G+++ T+YAAW EL+LIQ + P+ASF GHLCGI AG+LY+ V
Sbjct:    5 QLAAQINNLPVKPPLTLALMGLQVLIHYSP---------------------------MSLGVVVDLQRQCLNPAAMVLKRQWFRGLA------SPFLHGDDWHLYYNMASLLWKGVQIEPHMGPLSFGIMVAFLTVVSQALYIAVGWLALTGAGYGGIWSSCAVGFSGVLFGLKAILNAHSPTETVVWGWRLPTKYAAWAELLLIQLVTPHASFTGHLCGILAGLLYLVV 201          
BLAST of mRNA_H-elongata_contig879.16319.1 vs. uniprot
Match: A0A225X2V2_9STRA (Serine protease n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X2V2_9STRA)

HSP 1 Score: 159 bits (401), Expect = 8.510e-40
Identity = 102/281 (36.30%), Postives = 150/281 (53.38%), Query Frame = 2
Query:  446 FGPRMAPGLRGGMQNFGSGRGRHRNPWFIVLGLQLVQKIVDLPRKPPLTLALMAGMTALHL----APEVVNNFLGTGPAVGGLGGFLAESYRRWVSNGYSNHIQELCLLPASMLEAYQRTGALGFRRFFLSAFLHGSERHLYYNMWSFLLKGVSLELDMGTRAYFGLLAFCLVTSQALFLVASWIMLVVFEQPSAMYACTVGFSGVIFALKYVLNRRSPAYTRVMGFKIHTRYAAWLELVLIQFMVPNASFLGHLCGIFAGILYVEVPAVASALNLVAVSV 1276
            FGP +    R G  N G      R+   + L L LV++I  L RKPP+TL LMA M  +H      PE+   +                                LC  P  +L  +  T      R   SA +HG + HLY+NM SFL KG +LE  +G+  +   + + L+    L +V + ++   F+ P  ++ C+VGFSGV+FALK +LN  SPAY+ V GF++ T+YAAWLELV+I F+VP +SF+GH+CGI AG ++V  PA+ +A++  A ++
Sbjct:    2 FGPNVG---RRGRANVG------RDGQGVALMLMLVRQIQQLERKPPVTLGLMALMYGIHFQKTQTPELFAPY-------------------------------SLC--PDRVLSHWDWT------RIVASALIHGDDWHLYHNMVSFLWKGYNLEYKLGSVRFLLTVGYLLLLCHVLVVVVALVLATRFQMPGPLHQCSVGFSGVLFALKVLLNHNSPAYSSVYGFQVPTKYAAWLELVVIHFLVPRSSFMGHMCGILAGYIFVFSPAMQTAMSTGAHTI 234          
BLAST of mRNA_H-elongata_contig879.16319.1 vs. uniprot
Match: A0A2R6WSK1_MARPO (RanBP2-type domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WSK1_MARPO)

HSP 1 Score: 159 bits (402), Expect = 9.110e-40
Identity = 99/249 (39.76%), Postives = 131/249 (52.61%), Query Frame = 2
Query:  503 RGRHR-----NPWFIVLGLQLVQKIVDLPRKPPLTLALMAGMTALHLAPEVVNNFLGTGPAVGGLGGFLAESYRRWVSNGYSNHIQELCLLPASMLEAYQRTGALGFRRFFLSAFLHGSERHLYYNMWSFLLKGVSLELDMGTRAYFGLLAFCLVTSQALFLVASWIMLVVFEQPSAMYA-CTVGFSGVIFALKYVLNRRSPAYTRVMGFKIHTRYAAWLELVLIQFMVPNASFLGHLCGIFAGILYVE 1231
            RGR+R     N    +L L    + + LPRKPP+T  L+   T +HL P V++  L T                          +QE+CL P  +L+ +        RR  LSAF H  + HL YNM S L KGV LE  MG++ + G++   L  S  L +V++  +    + P  MY+ C VGFS V+FALK VLN  SP YT V G  I +RYAAW EL  IQ  VP  SFLGHLCG+ AG++Y+ 
Sbjct:    3 RGRNRRVGGGNGMLYMLALHAASQFMQLPRKPPVTATLILANTIVHLRPGVLDLVLPT--------------------------VQEVCLNPYRVLKDWDA------RRLLLSAFYHVDDAHLVYNMISLLWKGVQLEGSMGSKKFAGMVGVLLGLSHGLVVVSAKFLYSFADNPGPMYSECAVGFSAVLFALKMVLNWNSPDYTNVYGVLIPSRYAAWAELFFIQMFVPGTSFLGHLCGVVAGLIYIN 219          
BLAST of mRNA_H-elongata_contig879.16319.1 vs. uniprot
Match: A0A482UPC4_9ARCH (Rhomboid family intramembrane serine protease (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UPC4_9ARCH)

HSP 1 Score: 155 bits (392), Expect = 1.360e-39
Identity = 88/250 (35.20%), Postives = 141/250 (56.40%), Query Frame = 2
Query:  503 RGRHRNPWFIVLGLQLVQKIVDLPRKPPLTLALMAGMTALHLAPEVVNNFLGTGPAVGGLGGFLAESYRRWVSNGYSNHIQELCLLPASMLEAYQRTGALGFRRFFLSAFLHGSERHLYYNMWSFLLKGVSLELDMGTRAYFGLLAFCLVTSQALFLVASWIMLVVFEQP--SAMYACTVGFSGVIFALKYVLNRRSPAYTRVMGFKIHTRYAAWLELVLIQFMVPNASFLGHLCGIFAGILYVEVPAVA 1246
            R  H +P  + L +Q++ ++  LP KPP+TL L+A     H+ P+                 FL  S           ++++ C+ P+ ++ +     ++ + R  L+ F+H  + HLYYNM S L KGV LE   G+  +  L+ + L+ S  L +V S+++  V +    S+  +C +GFS V+F+LKYVLN+ SPAYT ++GF++ +++AAW ELVL   + P  SF+GHL GI AG LYV + +VA
Sbjct:   10 RSPHVSPVVVSLLIQILSQLEKLPYKPPVTLGLLAMNIIAHIHPDPY---------------FLDYSL---------TNVRQNCIWPSLIVSSLTNNHSILWNRIVLAGFMHADDMHLYYNMLSLLWKGVQLEQQFGSFQFGILVVYSLLASHILLVVMSYVVYAVTQNIHISSYDSCAIGFSAVLFSLKYVLNQNSPAYTSILGFQVPSKWAAWAELVLASLLSPQVSFIGHLAGILAGYLYVHMDSVA 235          
BLAST of mRNA_H-elongata_contig879.16319.1 vs. uniprot
Match: A0A6A4D013_9STRA (Rhomboid domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A4D013_9STRA)

HSP 1 Score: 157 bits (398), Expect = 2.060e-39
Identity = 96/253 (37.94%), Postives = 140/253 (55.34%), Query Frame = 2
Query:  530 IVLGLQLVQKIVDLPRKPPLTLALMAGMTALHL----APEVVNNFLGTGPAVGGLGGFLAESYRRWVSNGYSNHIQELCLLPASMLEAYQRTGALGFRRFFLSAFLHGSERHLYYNMWSFLLKGVSLELDMGTRAYFGLLAFCLVTSQALFLVASWIMLVVFEQPSAMYACTVGFSGVIFALKYVLNRRSPAYTRVMGFKIHTRYAAWLELVLIQFMVPNASFLGHLCGIFAGILYVEVPAVASALNLVAVSV 1276
            + L L LV++I  L RKPP+TL LMA M  LH      PE+   F                                LC  P  +L  +       ++R   S  +H  + HLY+NM SFL KG +LE  +G+  +   + + LV    L ++ + I+   F+ P+ ++ C+VGFSGV+FALK +LN  SPA++ V GF++ T+YAAWLELV+I F+VP +SF+GH+CGI AG ++V  PA+ SA+  VA +V
Sbjct:   24 LALMLMLVRQIQQLERKPPVTLGLMALMYGLHFQKNQTPELFAPF-------------------------------SLC--PDRVLSNWD------WKRLVASGLIHVDDWHLYHNMISFLWKGCNLEYKLGSVRFLLTVGYLLVLCHVLVVMVALILATGFQMPAPLHQCSVGFSGVLFALKVLLNHNSPAFSSVYGFQVPTKYAAWLELVVIHFLVPRSSFMGHMCGILAGYIFVYSPAMQSAMTSVARAV 237          
BLAST of mRNA_H-elongata_contig879.16319.1 vs. uniprot
Match: A0A836CHG7_9STRA (Rhomboid domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHG7_9STRA)

HSP 1 Score: 157 bits (398), Expect = 3.250e-39
Identity = 132/354 (37.29%), Postives = 183/354 (51.69%), Query Frame = 2
Query:  497 SGRGRHRNPWFIVLGLQLVQKIVDLPRKPPLTLALMAGMTALHLAPEVVNNFLGTGPAVGGLGGFLAESYRRWVSNGYSNHIQELCLLPASMLEAYQRTGALGFRRFFLSAFLHGSERHLYYNMWSFLLKGVSLELDMGTRAYFGLLAFCLVTSQALFLVASWIMLVVFEQPSAMYACTVGFSGVIFALKYVLNRRSPAYTRVMG-FKIHTRYAAWLELVLIQFMVPNASFLGHLCGIFAGILYVEVPAVAS--ALNLVAVSV----------FGNPRPSYTYSSGSTGSRAPTSARDGDMRRHGSGS-ASGIARRVQTAHSSAFAGDEAEEAAFQEALRRSMLDTGPRGANGA 1516
            SGR R  NP+   + L L+ + + LP KPP T  L+A    +HL P  +   L   PA             R +   Y+    ++CL PA +++     G +   R F SA +HG + HL+YNM S L+KGVSLE  MGT A+  L+ F    S  L +V +   + +   P    +C VGFS V+FALKYV   R PA    +G F I +R+A+W EL+LIQ +VPNASFLGHLCGI AG+L+V   AV +  A  L  + V          +G     YTY+ G++G+ A               + A G A     + S+AF  ++A+ A  QEALRRS+ +    GA GA
Sbjct:    5 SGRQRTGNPYATGVALDLLNRFLQLPYKPPFTCFLIALNACIHLYPAALAGVL---PA-------------RLLFGDYT----KVCLKPAKVVKELLN-GEVDAVRLFGSALIHGDDLHLWYNMGSLLMKGVSLETTMGTPAFALLVVFLWALSHTLVVVVALASVYLGFDPG-FNSCMVGFSAVLFALKYVAAFREPARPTPVGYFLIDSRWASWAELILIQVVVPNASFLGHLCGILAGVLWVHGGAVVAYTAKTLAPLGVGRGGPGAYDTYGGRGSRYTYARGTSGTAAAXXXXXXXXXXXRPPAFAPGAA-----SDSAAFEVEDAD-AQLQEALRRSLEEVRLGGAAGA 330          
BLAST of mRNA_H-elongata_contig879.16319.1 vs. uniprot
Match: A0A2K1JBZ4_PHYPA (RanBP2-type domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JBZ4_PHYPA)

HSP 1 Score: 156 bits (394), Expect = 1.130e-38
Identity = 91/245 (37.14%), Postives = 132/245 (53.88%), Query Frame = 2
Query:  518 NPWFIVLGLQLVQKIVDLPRKPPLTLALMAGMTALHLAPEVVNNFLGTGPAVGGLGGFLAESYRRWVSNGYSNHIQELCLLPASMLEAYQRTGALGFRRFFLSAFLHGSERHLYYNMWSFLLKGVSLELDMGTRAYFGLLAFCLVTSQALFLVASWIMLVVFEQPSAMYA-CTVGFSGVIFALKYVLNRRSPAYTRVMGFKIHTRYAAWLELVLIQFMVPNASFLGHLCGIFAGILYVEVPAVAS 1249
            N    ++ +     ++  PRKP +T AL+A  T +HL P  ++  L T                          + E+CL P  +++          +R +LSA  H  E HL YNM S   KG+ LE  MG++ Y  ++A  L  S +L + +S  +  + + P++ Y+ C+VGFSGV+FALK VLN  SP +T V G  + +RYAAW+EL++IQ  VP  SFLGHLCGI AG++YV  P V S
Sbjct:   11 NSMLYMMAMHAATNLLQQPRKPVVTAALIAAQTLIHLRPGKLDAILPT--------------------------LSEVCLNPYFVVKNRD------LKRLWLSALYHVDETHLVYNMISLTWKGIQLENSMGSQNYAAMVAVLLGLSSSLVVASSSFLAFIADSPTSFYSECSVGFSGVLFALKVVLNYNSPTHTNVYGILVPSRYAAWVELLVIQMFVPGTSFLGHLCGILAGLIYVNTPGVVS 223          
BLAST of mRNA_H-elongata_contig879.16319.1 vs. uniprot
Match: A0A7S2TY11_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TY11_9EUKA)

HSP 1 Score: 153 bits (387), Expect = 2.550e-38
Identity = 96/244 (39.34%), Postives = 131/244 (53.69%), Query Frame = 2
Query:  506 GRHR---NPWFIVLGLQLVQKIVDLPRKPPLTLALMAGMTALHLAPEVVNNFLGTGPAVGGLGGFLAESYRRWVSNGYSNHIQELCLLPASMLEAYQRTGALGFRRFFLSAFLHGSERHLYYNMWSFLLKGVSLELDMGTRAYFGLLAFCLVTSQALFLVASWIMLVVFEQPSAMYACTVGFSGVIFALKYVLNRRSPAYTRVMGFKIHTRYAAWLELVLIQFMVPNASFLGHLCGIFAGILYV 1228
            GR R   +P  ++L +QL ++I +L  KPP TLALMA  +A++L                      +  +R          + ++C+ PA +L          ++R  LSAF H  + HLYYNM S L KGV LE   GT  + G+    L  S + ++ A+WIM  +    S+M  C VGFS V+FA K VLN  SP  T V G  +  +YA WLELV+I  + PNASFLGHLCGI AG++YV
Sbjct:    7 GRRRGQIDPRMMMLLMQLGRQIANLEYKPPATLALMALNSAVYLYE-------------------FSLPFR----------VPDVCMHPAKILFGGD------WKRLVLSAFYHADDYHLYYNMSSLLWKGVQLEQQFGTEEFIGMTLVLLGLSHSFYVAAAWIMYTLGISSSSMQTCAVGFSAVLFAYKVVLNFNSPRMTNVYGISVPLKYACWLELVMISIITPNASFLGHLCGILAGLVYV 215          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig879.16319.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJN1_ECTSI1.790e-10847.94Rhomboid domain-containing protein n=2 Tax=Ectocar... [more]
A0A024TVC7_9STRA9.720e-4235.29Rhomboid domain-containing protein n=1 Tax=Aphanom... [more]
A0A813AIL7_9DINO8.490e-4141.74RBL14 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A225X2V2_9STRA8.510e-4036.30Serine protease n=1 Tax=Phytophthora megakarya Tax... [more]
A0A2R6WSK1_MARPO9.110e-4039.76RanBP2-type domain-containing protein n=2 Tax=Marc... [more]
A0A482UPC4_9ARCH1.360e-3935.20Rhomboid family intramembrane serine protease (Fra... [more]
A0A6A4D013_9STRA2.060e-3937.94Rhomboid domain-containing protein n=3 Tax=Phytoph... [more]
A0A836CHG7_9STRA3.250e-3937.29Rhomboid domain-containing protein n=1 Tax=Tribone... [more]
A0A2K1JBZ4_PHYPA1.130e-3837.14RanBP2-type domain-containing protein n=2 Tax=Phys... [more]
A0A7S2TY11_9EUKA2.550e-3839.34Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig879contigH-elongata_contig879:10383..14311 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score343.2
Seed ortholog evalue1.7e-91
Seed eggNOG ortholog2880.D8LJN1
Preferred nameRHBDD1
KEGG koko:K09651
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006464,GO:0006508,GO:0006807,GO:0006810,GO:0006886,GO:0006950,GO:0006986,GO:0007276,GO:0007283,GO:0008104,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009056,GO:0009057,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010498,GO:0010604,GO:0010628,GO:0010941,GO:0010954,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016787,GO:0017171,GO:0019222,GO:0019538,GO:0019953,GO:0022412,GO:0022414,GO:0030154,GO:0030162,GO:0030163,GO:0030176,GO:0030970,GO:0031224,GO:0031227,GO:0031293,GO:0031323,GO:0031325,GO:0031984,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032527,GO:0032879,GO:0033036,GO:0033554,GO:0033619,GO:0034613,GO:0034620,GO:0034644,GO:0034976,GO:0035966,GO:0035967,GO:0036211,GO:0036503,GO:0042175,GO:0042176,GO:0042221,GO:0042886,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044322,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045184,GO:0045732,GO:0045862,GO:0046907,GO:0048232,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048609,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051603,GO:0051641,GO:0051649,GO:0051704,GO:0051716,GO:0060255,GO:0060548,GO:0065007,GO:0070011,GO:0070613,GO:0070727,GO:0070887,GO:0071214,GO:0071310,GO:0071478,GO:0071482,GO:0071702,GO:0071704,GO:0071705,GO:0080090,GO:0098827,GO:0104004,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1903317,GO:1903319,GO:1903513,GO:1904211
EggNOG free text desc.serine-type endopeptidase activity
EggNOG OGsKOG2632@1,KOG2632@2759
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPeptidase S54, rhomboid domain
Ec32 orthologEc-17_002690.1
Exons3
Model size2032
Cds size1278
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig879.16319.1prot_H-elongata_contig879.16319.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig879 10816..13990 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931280.279996-UTR-H-elongata_contig879:10382..108151622931280.279996-UTR-H-elongata_contig879:10382..10815Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig879 10383..10815 +
1691679771.4408772-UTR-H-elongata_contig879:10382..108151691679771.4408772-UTR-H-elongata_contig879:10382..10815Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig879 10383..10815 +
1622931280.3456805-UTR-H-elongata_contig879:13990..143111622931280.3456805-UTR-H-elongata_contig879:13990..14311Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig879 13991..14311 +
1691679771.476559-UTR-H-elongata_contig879:13990..143111691679771.476559-UTR-H-elongata_contig879:13990..14311Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig879 13991..14311 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931280.29775-CDS-H-elongata_contig879:10815..111711622931280.29775-CDS-H-elongata_contig879:10815..11171Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig879 10816..11171 +
1691679771.4513779-CDS-H-elongata_contig879:10815..111711691679771.4513779-CDS-H-elongata_contig879:10815..11171Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig879 10816..11171 +
1622931280.315692-CDS-H-elongata_contig879:12670..129831622931280.315692-CDS-H-elongata_contig879:12670..12983Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig879 12671..12983 +
1691679771.4594278-CDS-H-elongata_contig879:12670..129831691679771.4594278-CDS-H-elongata_contig879:12670..12983Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig879 12671..12983 +
1622931280.3323503-CDS-H-elongata_contig879:13381..139901622931280.3323503-CDS-H-elongata_contig879:13381..13990Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig879 13382..13990 +
1691679771.4679563-CDS-H-elongata_contig879:13381..139901691679771.4679563-CDS-H-elongata_contig879:13381..13990Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig879 13382..13990 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig879.16319.1

>prot_H-elongata_contig879.16319.1 ID=prot_H-elongata_contig879.16319.1|Name=mRNA_H-elongata_contig879.16319.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=426bp
MFPHFGPRMAPGLRGGMQNFGSGRGRHRNPWFIVLGLQLVQKIVDLPRKP
PLTLALMAGMTALHLAPEVVNNFLGTGPAVGGLGGFLAESYRRWVSNGYS
NHIQELCLLPASMLEAYQRTGALGFRRFFLSAFLHGSERHLYYNMWSFLL
KGVSLELDMGTRAYFGLLAFCLVTSQALFLVASWIMLVVFEQPSAMYACT
VGFSGVIFALKYVLNRRSPAYTRVMGFKIHTRYAAWLELVLIQFMVPNAS
FLGHLCGIFAGILYVEVPAVASALNLVAVSVFGNPRPSYTYSSGSTGSRA
PTSARDGDMRRHGSGSASGIARRVQTAHSSAFAGDEAEEAAFQEALRRSM
LDTGPRGANGAGSTRGEQGRMGHGGDTPITNVESYRVTPSAPSEEVEWSV
ESEGGTGIGTAELRRRRLQRMSIDL*
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mRNA from alignment at H-elongata_contig879:10383..14311+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig879.16319.1 ID=mRNA_H-elongata_contig879.16319.1|Name=mRNA_H-elongata_contig879.16319.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3929bp|location=Sequence derived from alignment at H-elongata_contig879:10383..14311+ (Himanthalia elongata Himel1 dioecious)
ATTTTATGGATCAAGTCATCAGGCTTTCATTTGTTCCTCGAGGAGAGAGA GACACGTGGAGCAACGAACTGTTATATGTTACAACACCACCCGCGATTCG CGGTTGTTCCACGTGAGTGGTTCTGAGTAGAATTAACTCTCCAATACGAG AGTTTAACTCACTGGAACAGAGAGCGCATTGTCGGTCACTCGTTGATATA GGTGATAAATAGCGCGACGGATAACAGTCCAGCGGGGTTGCAAACGGCAA GGATTCATCAGTCTCCAATCTGCTCTTACAAAGTGAAGAGCTTCGAAACT ACTACGCTGGGAACTCCCACGCCCCCGAAGCCCTGCCTACCGCGTCCTGT CGTCGTCCCGTTCCGCTTTAATATTACTAAAGGACTACAACACTATAAAA GCGGCCCTATAATAGTCGACACCCGTCCGAGTGATGTTCCCGCACTTCGG ACCTCGGATGGCCCCAGGGCTAAGAGGGGGGATGCAAAACTTTGGATCGG GAAGGGGGCGTCATCGCAACCCATGGTTTATCGTCCTGGGCCTCCAGCTC GTGCAGAAGATCGTCGACCTTCCGAGGAAGCCGCCGCTAACGCTAGCCCT CATGGCAGGAATGACAGCGCTTCATCTTGCGCCAGAAGTCGTCAACAATT TTCTCGGGACAGGGCCTGCTGTTGGCGGATTAGGTGGATTTCTTGCCGAG AGTTATCGCCGCTGGGTGTCAAACGGGTATAGCAATCATATCCAGGAGCT GTGTTTGCTGCCCGCGAGCATGCTGGAGGCGTATCAGAGGTGAGTGTCAT GAATATATATATATATATAAATATATAATATCGGTATGTATATTTTTTTG ATTGCGAGAAGGATTCAACCGTCCCTTTCCCTCGTCAACCGTGAATTATT TATTTTTATTTTTAATGAACTCATTCCAACCCAACATCCACACCTGTACC CACGAAATATTCTTTCTCCACTCCACTTGTTGGGCATGGCATGATGTGAG AGAAAATCTCAGTTCGTGTGACTTCGCCAAGATCCGAACTCGCGTCACAA CGTCAGAAGGTTTCGAGGTTACCAACTTAACCACCGGGTCGGTATCCCCG ATTATTTCCTTAACTACCTACCCGTAGAGCAGTGCCGAGAAGTGCTGCGT TCGTATGGTCGAGAAAATGGGGAGGCGGGGGTGAATGTTCGGAGAGTTGG AATGAGCCCAAAGTATTTTATAAATAAAAAAATGGGGAGGCGGGGGTTTC CATCCCCAAGGTGTTTTACACTATAATGTACTATCGCATAACCCTGTCAG TTTCGAGAAGCATTTGAGCTTTGATTCGTGTTCGTCCATGGGCGCGTTTC GCGTAAACGTAGACATATGGAGTGGCGTGGTCGTGCGACGGTTGATTCGA GAATATCCTTCTGGGAATTTGCTGCGTAGGATGTTTCTTCGACGAAATAT CGATATCGTCCAGCAATGCTAGAAGTATACGCCGATAGCCCGGACCTCGC TTTGTAACTTCGCATTAATTTAGCAGCGTTGTTACCCAATTACATGGAAC AGCGTTAGCTACGTCCGTAGCACCCAAGGAGAGCTCACAGAACAGCGGGC CCCGGTCCTCGAGTGTTTATCACGTATAGCTTTGGGTTCTCTACGGTCTT AGGAAGGACAGAGAGTTCTTTCATCAGAAGCAGCAACGTCAATCAGACGC CACGGGGTCGTCTATCCATGTGTGGAAGGTATGGCAGCAGCGAGGAAATC ATTAGCCGGGTTTTTTGTCAACACGATAGAAATAACTCTAGCTCGCTGCT GCCCAAAATCCCGTATTTCCACGAAATCAAGGCAAAGTGATTGGACTCTT CTTGCCGGAGGGATAGCCACCGTAAACACGAAATACGCGGTAAATCTACG AACCGCAGTCAAGTTGAATCGAAAGGAAACGTTATATAATACACTAATAA ATAGGTAGCCGACTAGTCGGTAATGTATCTTGCGAACAGAAGAAAATAAA AAATTAAAAGGGTCGAAGAAGAAGTGGTCCCCACTCGTGCGTGACGAAAG CAGGATAATTTCGGCATCACTTTGTGGGTCGTACGCTGTCGCTGCTGCCG TGCTTACCGCGATTCGGAGCGCTTACCCGGCGGTATGTATATTCGTAGAC ACTGCCTAAGGTTGCGTAAAGAACAGGTTGTATCGACATCCTTAAGTAGA GGGGATAGTCGGAGAAGCACTTTACCAACGAGGATACGCCCCTCACGTTA TGCCGTCGATGAATCTCCTCCAAACCTGAACCTACCAGGACGGGGGCGCT AGGTTTCCGGAGATTCTTCTTGTCCGCCTTTCTCCACGGCAGCGAGAGGC ACCTCTACTACAACATGTGGTCATTCCTTCTCAAGGGAGTGTCCCTGGAG CTCGACATGGGAACGCGGGCATACTTCGGACTGCTGGCTTTCTGTCTTGT CACCTCACAAGCGCTATTTCTCGTAGCTTCGTGGATCATGCTGGTGGTGT TTGAGCAGCCCTCGGCCATGTACGCGTGCACCGTGGGATTCTCCGGGGTA ATATTCGCGCTCAAGTACGTCCTGAACCGGCGATCGCCTGCGTACACGAG GGTGAGCACGACTTGGTCGTTGAACGCCCGTGGTGACACCCCGGGAACCC GTCTTCCTCCTCGTAACATGTTTTCGCTCGACTTCTCTTGCAGGAAACCT TTGCGCGCGGTTGTTCTAAAAGCCCCATGCTGACTCTAGATCCGAACAGG TGGCAGTCGTTTTATCGAGTGCTTTCCCTCCTTTTCTTCGTCCCATGCAG CGAAATAGGCGTATAGTCCTACTACCACGTCCTGATATCGTCCGCTTTCG TACATGGGATTTTTGCGAAAAAAATCTCACGAGTTTCATGGGAGTGGCGG TACCGCCGCTGGCCCTTCGTCTCGCTTTAGTCTCTCGCATCCGAAAGACT CACCCTTTCGTCTTCGTATATTTCACAATCGCTCCCGCGCGTGCCGCAGG TGATGGGGTTCAAGATCCACACGCGATACGCCGCCTGGTTGGAGCTGGTC CTTATCCAATTTATGGTTCCCAATGCGTCATTCCTGGGTCACCTATGCGG CATCTTCGCTGGAATCTTGTATGTCGAGGTGCCGGCCGTGGCGAGTGCAT TGAACCTCGTTGCGGTCTCCGTGTTTGGTAACCCCAGACCTTCCTACACC TACAGCAGCGGGTCTACCGGATCCCGCGCACCTACCAGCGCACGGGATGG CGATATGAGGCGGCATGGAAGTGGGTCTGCTTCGGGGATCGCAAGAAGAG TACAAACCGCTCACTCCAGTGCCTTCGCTGGCGATGAAGCAGAAGAGGCT GCCTTCCAGGAGGCGCTGCGGCGTTCAATGCTCGACACGGGACCCCGCGG AGCGAACGGCGCGGGATCGACGCGGGGCGAGCAAGGACGGATGGGGCACG GAGGCGACACACCAATCACTAACGTCGAATCATATCGAGTGACGCCTTCC GCGCCTTCTGAAGAGGTTGAATGGAGCGTAGAATCGGAGGGCGGGACCGG CATTGGGACCGCTGAGCTTCGCAGACGCCGACTGCAGAGGATGAGCATAG ACTTGTGATTCCTTGAACCTTGGGTGGGATTTTCTTGTATAGAAGAGCAA TCGTGACTAGAGCACCATGTGAAGCGATGGAGCAATCGTAACTATAACGT GCCGTACTAAGTTATTCGCATTCGGGGAGGTATGCCGTAGCTTCGTCCGT GTTTTAGATCCTTCATGAGCTTTAATGTATCCGTGGATTTTCTGCCTTGT GTCGTACTCAACTCGCCCTCAAAGCATAATTTGTCGCATTCTTCGATGGA AGACGCGAAGAAACTTGCTCAACTTTTCCCTCGCGACTGATGCTGCGGCC GACAAACAGGCAAAGACGCGCTGTGCTGT
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Coding sequence (CDS) from alignment at H-elongata_contig879:10383..14311+

>mRNA_H-elongata_contig879.16319.1 ID=mRNA_H-elongata_contig879.16319.1|Name=mRNA_H-elongata_contig879.16319.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2556bp|location=Sequence derived from alignment at H-elongata_contig879:10383..14311+ (Himanthalia elongata Himel1 dioecious)
ATGTTCCCGCACTTCGGACCTCGGATGGCCCCAGGGCTAAGAGGGGGGAT
GCAAAACTTTGGATCGGGAAGGGGGCGTCATCGCAACCCATGGTTTATCG
TCCTGGGCCTCCAGCTCGTGCAGAAGATCGTCGACCTTCCGAGGAAGCCG
CCGCTAACGCTAGCCCTCATGGCAGGAATGACAGCGCTTCATCTTGCGCC
AGAAGTCGTCAACAATTTTCTCGGGACAGGGCCTGCTGTTGGCGGATTAG
GTGGATTTCTTGCCGAGAGTTATCGCCGCTGGGTGTCAAACGGGTATAGC
AATCATATCCAGGAGCTGTGTTTGCTGCCCGCGAGCATGCTGGAGGCGTA
TCAGAGATGTTCCCGCACTTCGGACCTCGGATGGCCCCAGGGCTAAGAGG
GGGGATGCAAAACTTTGGATCGGGAAGGGGGCGTCATCGCAACCCATGGT
TTATCGTCCTGGGCCTCCAGCTCGTGCAGAAGATCGTCGACCTTCCGAGG
AAGCCGCCGCTAACGCTAGCCCTCATGGCAGGAATGACAGCGCTTCATCT
TGCGCCAGAAGTCGTCAACAATTTTCTCGGGACAGGGCCTGCTGTTGGCG
GATTAGGTGGATTTCTTGCCGAGAGTTATCGCCGCTGGGTGTCAAACGGG
TATAGCAATCATATCCAGGAGCTGTGTTTGCTGCCCGCGAGCATGCTGGA
GGCGTATCAGAGGACGGGGGCGCTAGGTTTCCGGAGATTCTTCTTGTCCG
CCTTTCTCCACGGCAGCGAGAGGCACCTCTACTACAACATGTGGTCATTC
CTTCTCAAGGGAGTGTCCCTGGAGCTCGACATGGGAACGCGGGCATACTT
CGGACTGCTGGCTTTCTGTCTTGTCACCTCACAAGCGCTATTTCTCGTAG
CTTCGTGGATCATGCTGGTGGTGTTTGAGCAGCCCTCGGCCATGTACGCG
TGCACCGTGGGATTCTCCGGGGTAATATTCGCGCTCAAGTACGTCCTGAA
CCGGCGATCGCCTGCGTACACGAGGGACGGGGGCGCTAGGTTTCCGGAGA
TTCTTCTTGTCCGCCTTTCTCCACGGCAGCGAGAGGCACCTCTACTACAA
CATGTGGTCATTCCTTCTCAAGGGAGTGTCCCTGGAGCTCGACATGGGAA
CGCGGGCATACTTCGGACTGCTGGCTTTCTGTCTTGTCACCTCACAAGCG
CTATTTCTCGTAGCTTCGTGGATCATGCTGGTGGTGTTTGAGCAGCCCTC
GGCCATGTACGCGTGCACCGTGGGATTCTCCGGGGTAATATTCGCGCTCA
AGTACGTCCTGAACCGGCGATCGCCTGCGTACACGAGGGTGATGGGGTTC
AAGATCCACACGCGATACGCCGCCTGGTTGGAGCTGGTCCTTATCCAATT
TATGGTTCCCAATGCGTCATTCCTGGGTCACCTATGCGGCATCTTCGCTG
GAATCTTGTATGTCGAGGTGCCGGCCGTGGCGAGTGCATTGAACCTCGTT
GCGGTCTCCGTGTTTGGTAACCCCAGACCTTCCTACACCTACAGCAGCGG
GTCTACCGGATCCCGCGCACCTACCAGCGCACGGGATGGCGATATGAGGC
GGCATGGAAGTGGGTCTGCTTCGGGGATCGCAAGAAGAGTACAAACCGCT
CACTCCAGTGCCTTCGCTGGCGATGAAGCAGAAGAGGCTGCCTTCCAGGA
GGCGCTGCGGCGTTCAATGCTCGACACGGGACCCCGCGGAGCGAACGGCG
CGGGATCGACGCGGGGCGAGCAAGGACGGATGGGGCACGGAGGCGACACA
CCAATCACTAACGTCGAATCATATCGAGTGACGCCTTCCGCGCCTTCTGA
AGAGGTTGAATGGAGCGTAGAATCGGAGGGCGGGACCGGCATTGGGACCG
CTGAGCTTCGCAGACGCCGACTGCAGAGGATGAGCATAGACTTGTGAGTG
ATGGGGTTCAAGATCCACACGCGATACGCCGCCTGGTTGGAGCTGGTCCT
TATCCAATTTATGGTTCCCAATGCGTCATTCCTGGGTCACCTATGCGGCA
TCTTCGCTGGAATCTTGTATGTCGAGGTGCCGGCCGTGGCGAGTGCATTG
AACCTCGTTGCGGTCTCCGTGTTTGGTAACCCCAGACCTTCCTACACCTA
CAGCAGCGGGTCTACCGGATCCCGCGCACCTACCAGCGCACGGGATGGCG
ATATGAGGCGGCATGGAAGTGGGTCTGCTTCGGGGATCGCAAGAAGAGTA
CAAACCGCTCACTCCAGTGCCTTCGCTGGCGATGAAGCAGAAGAGGCTGC
CTTCCAGGAGGCGCTGCGGCGTTCAATGCTCGACACGGGACCCCGCGGAG
CGAACGGCGCGGGATCGACGCGGGGCGAGCAAGGACGGATGGGGCACGGA
GGCGACACACCAATCACTAACGTCGAATCATATCGAGTGACGCCTTCCGC
GCCTTCTGAAGAGGTTGAATGGAGCGTAGAATCGGAGGGCGGGACCGGCA
TTGGGACCGCTGAGCTTCGCAGACGCCGACTGCAGAGGATGAGCATAGAC
TTGTGA
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