prot_H-elongata_contig87850.16315.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig87850.16315.1
Unique Nameprot_H-elongata_contig87850.16315.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length159
Homology
BLAST of mRNA_H-elongata_contig87850.16315.1 vs. uniprot
Match: D7FMA2_ECTSI (Ribonucleoside-diphosphate reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMA2_ECTSI)

HSP 1 Score: 291 bits (745), Expect = 2.610e-91
Identity = 138/158 (87.34%), Postives = 148/158 (93.67%), Query Frame = 0
Query:    1 KLRLPFESEGARVLNREIFETMYFAALTASCELAEKEGAYETFRGSPVSRGIFQFDMWGETPSSRWDWDDLRKRVAKHGLRNSLLLAPMPTASTAQILGFNECIEPYTSNMYARRVKAGEFIVVNPHLFHDLVEMGLWNASVRNQLMASGGSIAAIEG 158
            K+R+PFESEGAR LNR+IFETMYFAA+TASCELAEKEG YETF GSPVS+GIFQFDMWGETPS RWDW  LR RVAKHG+RNSLLLAPMPTASTAQILGFNECIEPYTSN+YARRVKAGEFIVVNPHLF DL+EMGLW+ SVRNQLMASGGSIA+I G
Sbjct:  664 KMRMPFESEGARALNRDIFETMYFAAMTASCELAEKEGPYETFEGSPVSKGIFQFDMWGETPSDRWDWASLRTRVAKHGVRNSLLLAPMPTASTAQILGFNECIEPYTSNLYARRVKAGEFIVVNPHLFTDLMEMGLWSPSVRNQLMASGGSIASIAG 821          
BLAST of mRNA_H-elongata_contig87850.16315.1 vs. uniprot
Match: A0A7S0GMI2_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0GMI2_9EUKA)

HSP 1 Score: 241 bits (616), Expect = 5.990e-77
Identity = 112/155 (72.26%), Postives = 131/155 (84.52%), Query Frame = 0
Query:    4 LPFESEGARVLNREIFETMYFAALTASCELAEKEGAYETFRGSPVSRGIFQFDMWGETPSSR--WDWDDLRKRVAKHGLRNSLLLAPMPTASTAQILGFNECIEPYTSNMYARRVKAGEFIVVNPHLFHDLVEMGLWNASVRNQLMASGGSIAAI 156
            LPF+S+ AR LNR++FET+YF A+TAS +LA+KEG YETF GSP+S+G FQFDMWGE PS R  WDW+ LRK V KHG+RNSL LAPMPTASTAQI+G+NECIEPYTSN+Y RRVKAGEFIVVNPHL  DL+++GLW   VRNQLMA GGS+  I
Sbjct:   77 LPFDSKEARDLNRDVFETIYFGAVTASVDLAKKEGPYETFSGSPMSKGEFQFDMWGEKPSPRLNWDWEGLRKEVVKHGIRNSLFLAPMPTASTAQIMGYNECIEPYTSNLYVRRVKAGEFIVVNPHLLSDLIKLGLWTPEVRNQLMAEGGSVQGI 231          
BLAST of mRNA_H-elongata_contig87850.16315.1 vs. uniprot
Match: A0A7W1VXY1_9BACT (Ribonucleoside-diphosphate reductase subunit alpha n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=A0A7W1VXY1_9BACT)

HSP 1 Score: 229 bits (584), Expect = 8.200e-73
Identity = 104/156 (66.67%), Postives = 135/156 (86.54%), Query Frame = 0
Query:    2 LRLPFESEGARVLNREIFETMYFAALTASCELAEKEGAYETFRGSPVSRGIFQFDMWGETPSSRWDWDDLRKRVAKHGLRNSLLLAPMPTASTAQILGFNECIEPYTSNMYARRVKAGEFIVVNPHLFHDLVEMGLWNASVRNQLMASGGSIAAIE 157
            LRLPFESE A++LNR+IFET+YFAA++AS +LA ++GAYETF GSP+S+GIFQFDMW   P++RW+W+ LRK V +HG+RNSLL+APMPTAST+QILG NEC EPYTSN+Y+RRV +GEFI+VN HL  DLV++GLWN  ++N+++A+ GSI  IE
Sbjct:   16 LRLPFESELAKLLNRDIFETIYFAAMSASKDLAVEQGAYETFEGSPLSKGIFQFDMWNVKPTNRWNWEKLRKEVIEHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFIIVNKHLLKDLVQLGLWNNDMKNRIIAANGSIQNIE 171          
BLAST of mRNA_H-elongata_contig87850.16315.1 vs. uniprot
Match: A0A6S7HT73_PARCT (Ribonucleoside-diphosphate reductase large subunit n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HT73_PARCT)

HSP 1 Score: 232 bits (592), Expect = 2.540e-72
Identity = 109/157 (69.43%), Postives = 132/157 (84.08%), Query Frame = 0
Query:    2 LRLPFESEGARVLNREIFETMYFAALTASCELAEKEGAYETFRGSPVSRGIFQFDMWGETPSSRWDWDDLRKRVAKHGLRNSLLLAPMPTASTAQILGFNECIEPYTSNMYARRVKAGEFIVVNPHLFHDLVEMGLWNASVRNQLMASGGSIAAIEG 158
            +R PFES+ AR LN EIFET+YFAALTASCELAEK+G Y T+ GSPVS+GI Q+D+WG TP++RW+W +L++++AKHG+RNSLLLAPMPTASTAQILG NE  EPYTSN+Y RRV +GEF VVN HL  DLVE  LWN  ++NQL+ASGGSI  I+G
Sbjct:  163 MRYPFESDEARQLNIEIFETIYFAALTASCELAEKDGPYSTYEGSPVSQGILQYDLWGVTPTNRWNWAELKEKIAKHGVRNSLLLAPMPTASTAQILGNNESFEPYTSNIYTRRVLSGEFQVVNNHLLKDLVEADLWNERLKNQLIASGGSIQNIDG 319          
BLAST of mRNA_H-elongata_contig87850.16315.1 vs. uniprot
Match: A0A835YSZ4_9STRA (Ribonucleoside-diphosphate reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSZ4_9STRA)

HSP 1 Score: 239 bits (610), Expect = 1.260e-71
Identity = 114/160 (71.25%), Postives = 132/160 (82.50%), Query Frame = 0
Query:    2 LRLPFESEGARVLNREIFETMYFAALTASCELAEKEGAYETFRGSPVSRGIFQFDMWGE---TPSSRWDWDDLRKRVAKHGLRNSLLLAPMPTASTAQILGFNECIEPYTSNMYARRVKAGEFIVVNPHLFHDLVEMGLWNASVRNQLMASGGSIAAIEG 158
            +RLPFES+GAR LN+EIFETMY AALTAS +LA  EG Y+++ GSP+S+G FQFD+WG+   TP  RWDW  L++RVA+ GLRNSLLLAPMPTASTAQILG+NECIEPYTSNMY RRVKAGEFIVVNPHLF DLV  GLW A  R QL+A GGS+  + G
Sbjct:  533 MRLPFESDGARALNKEIFETMYHAALTASSDLAAFEGPYDSYEGSPMSQGRFQFDLWGQEGGTPGGRWDWGALKERVARTGLRNSLLLAPMPTASTAQILGYNECIEPYTSNMYVRRVKAGEFIVVNPHLFRDLVNRGLWTADARAQLIADGGSVMRLPG 692          
BLAST of mRNA_H-elongata_contig87850.16315.1 vs. uniprot
Match: UPI001F03E0A5 (ribonucleoside-diphosphate reductase large subunit-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F03E0A5)

HSP 1 Score: 238 bits (607), Expect = 2.370e-71
Identity = 112/157 (71.34%), Postives = 132/157 (84.08%), Query Frame = 0
Query:    2 LRLPFESEGARVLNREIFETMYFAALTASCELAEKEGAYETFRGSPVSRGIFQFDMWGETPSSRWDWDDLRKRVAKHGLRNSLLLAPMPTASTAQILGFNECIEPYTSNMYARRVKAGEFIVVNPHLFHDLVEMGLWNASVRNQLMASGGSIAAIEG 158
            +R PFESE AR LN EIFETMYFAAL+ASCELAE+EG Y T+ GSPVS+GI QFD+W  TP++RW+W DL+K++AKHG+RNSLLLAPMPTASTAQILG NE  EPYTSN+Y RRV +GEF VVN HL  DLVE GLWN  ++NQL+A+GGSI  I+G
Sbjct:  523 MRYPFESEEARQLNIEIFETMYFAALSASCELAEEEGPYSTYEGSPVSQGILQFDLWNATPTNRWNWTDLKKKIAKHGVRNSLLLAPMPTASTAQILGNNESFEPYTSNIYTRRVLSGEFQVVNNHLLKDLVEAGLWNEKIKNQLIANGGSIQNIKG 679          
BLAST of mRNA_H-elongata_contig87850.16315.1 vs. uniprot
Match: A0A358Y7D7_9FLAO (Ribonucleoside-diphosphate reductase subunit alpha (Fragment) n=1 Tax=Crocinitomicaceae bacterium TaxID=2026728 RepID=A0A358Y7D7_9FLAO)

HSP 1 Score: 227 bits (579), Expect = 5.920e-71
Identity = 105/156 (67.31%), Postives = 129/156 (82.69%), Query Frame = 0
Query:    2 LRLPFESEGARVLNREIFETMYFAALTASCELAEKEGAYETFRGSPVSRGIFQFDMWGETPSSRWDWDDLRKRVAKHGLRNSLLLAPMPTASTAQILGFNECIEPYTSNMYARRVKAGEFIVVNPHLFHDLVEMGLWNASVRNQLMASGGSIAAIE 157
            L +PFES  AR LNRE+FET+Y+A++TAS +LA+++GAY TF GSPVS+GIFQFDMWG TP+SRW+WD L++ V  HG+RNSLLLAPMPTASTAQILG NEC EPYTSN+Y RRV +GEFI+VN HL  DLV+ GLWN  +R ++MA+ GSI  I 
Sbjct:  113 LGMPFESPEARALNREVFETIYYASMTASKDLAKEQGAYATFEGSPVSKGIFQFDMWGVTPTSRWEWDVLKEEVKAHGVRNSLLLAPMPTASTAQILGNNECFEPYTSNIYTRRVLSGEFIIVNKHLLKDLVKEGLWNKDMRQKIMAANGSIQNIN 268          
BLAST of mRNA_H-elongata_contig87850.16315.1 vs. uniprot
Match: A0A4Q3N253_9BACT (RIBORED_LARGE domain-containing protein n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=A0A4Q3N253_9BACT)

HSP 1 Score: 223 bits (569), Expect = 1.680e-70
Identity = 102/157 (64.97%), Postives = 128/157 (81.53%), Query Frame = 0
Query:    2 LRLPFESEGARVLNREIFETMYFAALTASCELAEKEGAYETFRGSPVSRGIFQFDMWGETPSSRWDWDDLRKRVAKHGLRNSLLLAPMPTASTAQILGFNECIEPYTSNMYARRVKAGEFIVVNPHLFHDLVEMGLWNASVRNQLMASGGSIAAIEG 158
            LRLPFESE A+ LN+EIFET+YFAA+TAS +LA+ EG YE+F GSPVS+GIFQFDMW   P+ RWDW  L+  V KHG+RNSLL+APMPTAST+QILG NEC EPYTSN+Y RRV +GEF+VVN HL  DLVE+ +WN  ++N+++ + GS+  I+G
Sbjct:   21 LRLPFESEKAKALNKEIFETIYFAAMTASKDLAKVEGYYESFPGSPVSKGIFQFDMWNVEPTLRWDWYTLKAEVIKHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYVRRVLSGEFVVVNKHLLKDLVELNMWNDDMKNRILTNNGSVQGIDG 177          
BLAST of mRNA_H-elongata_contig87850.16315.1 vs. uniprot
Match: A0A2L0BCD8_9CUCU (Ribonucleoside diphosphate reductase large subunit (Fragment) n=1 Tax=Tyrtaeus sp. CSR156 TaxID=2055565 RepID=A0A2L0BCD8_9CUCU)

HSP 1 Score: 225 bits (574), Expect = 1.760e-70
Identity = 104/157 (66.24%), Postives = 129/157 (82.17%), Query Frame = 0
Query:    2 LRLPFESEGARVLNREIFETMYFAALTASCELAEKEGAYETFRGSPVSRGIFQFDMWGETPSSRWDWDDLRKRVAKHGLRNSLLLAPMPTASTAQILGFNECIEPYTSNMYARRVKAGEFIVVNPHLFHDLVEMGLWNASVRNQLMASGGSIAAIEG 158
            LR+PF S  AR+LN++IFET+Y+ AL ASCE+AEK+G Y T++GSPVS+G+ Q+DMWG TP+S WDW  L++R+AKHG+RNSLLLAPMPTASTAQILG NE  EPYTSN+Y RRV +GEF VVN HL  DL E GLWN ++RNQ++A+ GSI  I G
Sbjct:  198 LRMPFSSPEARLLNKKIFETLYYGALEASCEIAEKDGPYSTYQGSPVSKGVLQYDMWGVTPTSLWDWAALKRRIAKHGVRNSLLLAPMPTASTAQILGNNESTEPYTSNIYVRRVLSGEFQVVNQHLLKDLTERGLWNDTMRNQIIANYGSIQNIPG 354          
BLAST of mRNA_H-elongata_contig87850.16315.1 vs. uniprot
Match: A0A4Q3RW21_9BACT (Ribonucleoside-diphosphate reductase subunit alpha (Fragment) n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=A0A4Q3RW21_9BACT)

HSP 1 Score: 224 bits (570), Expect = 2.090e-70
Identity = 103/157 (65.61%), Postives = 129/157 (82.17%), Query Frame = 0
Query:    2 LRLPFESEGARVLNREIFETMYFAALTASCELAEKEGAYETFRGSPVSRGIFQFDMWGETPSSRWDWDDLRKRVAKHGLRNSLLLAPMPTASTAQILGFNECIEPYTSNMYARRVKAGEFIVVNPHLFHDLVEMGLWNASVRNQLMASGGSIAAIEG 158
            LRLPFES+ A+ LN+E+FET+YFAA+TAS +LA K+GAYETF GSPVS+GIFQFDMW   P+ RWDW  L+  V KHG+RNSLL+APMPTAST+QILG NEC EPYTSN+Y RRV +GEF+VVN HL  DLVE+ LWN  +++++++  GSI  I+G
Sbjct:   39 LRLPFESDAAKQLNKEVFETIYFAAMTASKDLAIKDGAYETFAGSPVSKGIFQFDMWNVEPTLRWDWYTLKAAVMKHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYVRRVLSGEFVVVNKHLLKDLVELNLWNDEMKSKIISHNGSIQKIDG 195          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig87850.16315.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMA2_ECTSI2.610e-9187.34Ribonucleoside-diphosphate reductase n=2 Tax=Ectoc... [more]
A0A7S0GMI2_9EUKA5.990e-7772.26Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A7W1VXY1_9BACT8.200e-7366.67Ribonucleoside-diphosphate reductase subunit alpha... [more]
A0A6S7HT73_PARCT2.540e-7269.43Ribonucleoside-diphosphate reductase large subunit... [more]
A0A835YSZ4_9STRA1.260e-7171.25Ribonucleoside-diphosphate reductase n=1 Tax=Tribo... [more]
UPI001F03E0A52.370e-7171.34ribonucleoside-diphosphate reductase large subunit... [more]
A0A358Y7D7_9FLAO5.920e-7167.31Ribonucleoside-diphosphate reductase subunit alpha... [more]
A0A4Q3N253_9BACT1.680e-7064.97RIBORED_LARGE domain-containing protein n=1 Tax=Ch... [more]
A0A2L0BCD8_9CUCU1.760e-7066.24Ribonucleoside diphosphate reductase large subunit... [more]
A0A4Q3RW21_9BACT2.090e-7065.61Ribonucleoside-diphosphate reductase subunit alpha... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000788Ribonucleotide reductase large subunit, C-terminalPRINTSPR01183RIBORDTASEM1coord: 79..106
score: 55.05
coord: 14..37
score: 42.72
IPR000788Ribonucleotide reductase large subunit, C-terminalPFAMPF02867Ribonuc_red_lgCcoord: 1..149
e-value: 6.3E-45
score: 153.7
IPR000788Ribonucleotide reductase large subunit, C-terminalPROSITEPS00089RIBORED_LARGEcoord: 68..90
NoneNo IPR availableGENE3D3.20.70.20coord: 1..158
e-value: 4.8E-59
score: 202.4
NoneNo IPR availablePANTHERPTHR11573:SF6RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE SUBUNITcoord: 2..157
NoneNo IPR availableSUPERFAMILY51998PFL-like glycyl radical enzymescoord: 1..131
IPR039718Ribonucleoside-diphosphate reductase large subunitPANTHERPTHR11573RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE CHAINcoord: 2..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig87850contigH-elongata_contig87850:739..2023 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig87850.16315.1mRNA_H-elongata_contig87850.16315.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig87850 739..2023 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig87850.16315.1 ID=prot_H-elongata_contig87850.16315.1|Name=mRNA_H-elongata_contig87850.16315.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=159bp
KLRLPFESEGARVLNREIFETMYFAALTASCELAEKEGAYETFRGSPVSR
GIFQFDMWGETPSSRWDWDDLRKRVAKHGLRNSLLLAPMPTASTAQILGF
NECIEPYTSNMYARRVKAGEFIVVNPHLFHDLVEMGLWNASVRNQLMASG
GSIAAIEG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000788RNR_lg_C
IPR039718Rrm1