mRNA_H-elongata_contig8783.16313.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig8783.16313.1
Unique NamemRNA_H-elongata_contig8783.16313.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig8783.16313.1 vs. uniprot
Match: A0A6H5K9D0_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9D0_9PHAE)

HSP 1 Score: 315 bits (808), Expect = 4.720e-86
Identity = 173/261 (66.28%), Postives = 186/261 (71.26%), Query Frame = 2 
Query:  146 MAPHQLFPYDEWGGLRTTRQFLKSDGSVTQNDLCTVAERTV--------LAGGAPKS-TFGDQSKVAGADDC-EALFFSDLDDAVDDXXXXGGVGPE--SNWPRREFVPKRGVEIFVGGLTRSTRRDMLRDWFQHAGEVTEVRIARDKRRRRCRGYGYVRFATSDQANRAIESMHRFEFKHGRFLGVLPSDENRTLFVGGLCEEWSCQYITTLLKERMPGLRKVEPIPDREDRLKIRTFCFLEFDTHKEAAAIFNRHQVNP 892
            MAP Q+FPYDE G LRT RQ L                           L   +P + TF +     G   C +    SDL DA+ D XXX     +  + W  REFVPK GVEIFVGGLTRSTRRDMLRDWFQHAGEVTEVRIARDKRRRRCRGYGYVRFATS+QAN AIE+MHRFEFKHGRFLGVLPSDENRTLFVGGL EEWSC YI  LLKE+MPGLRKVEPIPDREDR KIRTFCFLEF +H EAA IFNRHQ +P
Sbjct:    1 MAPRQVFPYDECGVLRTPRQLLAESQXXXXXXXXXXXXXXXHQREPWLDLDNPSPFTPTFDESGSSGGEAGCVQQPHSSDLRDALKDDXXXXXESLDLGTAWASREFVPKPGVEIFVGGLTRSTRRDMLRDWFQHAGEVTEVRIARDKRRRRCRGYGYVRFATSEQANLAIETMHRFEFKHGRFLGVLPSDENRTLFVGGLQEEWSCAYICQLLKEKMPGLRKVEPIPDREDRFKIRTFCFLEFASHAEAAVIFNRHQTSP 261
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BLAST of mRNA_H-elongata_contig8783.16313.1 vs. uniprot
Match: D7FYA2_ECTSI (RRM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYA2_ECTSI)

HSP 1 Score: 241 bits (616), Expect = 1.290e-68
Identity = 138/223 (61.88%), Postives = 153/223 (68.61%), Query Frame = 2 
Query:  146 MAPHQLFPYDEWGGLRTTRQFLKSDGSVTQNDLCTVAERTVLAGG--------APKS-TFGDQSKVAGADDC-EALFFSDLDDAVDDXXXXGGVGPESN----WPRREFVPKRGVEIFVGGLTRSTRRDMLRDWFQHAGEVTEVRIARDKRRRRCRGYGYVRFATSDQANRAIESMHRFEFKHGRFLGVLPSDENRTLFVGGLCEEWSCQYITTLLKERMPGL 772
            MAP Q+FPY E G LRT RQ L       + +L +        G         +P + TF +     G   C +    SDL DA++D XXX       +    W  REFVPK GVEIFVGGLTRSTRRDMLRDWFQHAGEVTEVRIARDKRRRRCRGYGYVRFATS+QANRAI++MHRFEFKHGRFLGVLPSDENRTLFVGGL EEWSC YI  LLKE+M  L
Sbjct:    1 MAPRQVFPYHECGVLRTPRQLLAESQQQQRKELESXXXEQHRQGEQWADIDKPSPFTPTFDESGSSGGEAACVQQPHCSDLRDALNDDXXXXXXXESLDLGAVWASREFVPKPGVEIFVGGLTRSTRRDMLRDWFQHAGEVTEVRIARDKRRRRCRGYGYVRFATSEQANRAIDTMHRFEFKHGRFLGVLPSDENRTLFVGGLQEEWSCAYICQLLKEKMVRL 223
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BLAST of mRNA_H-elongata_contig8783.16313.1 vs. uniprot
Match: A0A836CJD8_9STRA (RRM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJD8_9STRA)

HSP 1 Score: 169 bits (428), Expect = 4.130e-39
Identity = 82/175 (46.86%), Postives = 110/175 (62.86%), Query Frame = 2 
Query:  434 PKRGVEIFVGGLTRSTRRDMLRDWFQHAGEVTEVRIARDKRRRRCRGYGYVRFATSDQANRAIESMHRFEFKHGRFLGVLPSDENRTLFVGGLCEEWSCQYITTLLKERMPGLRK--------------------------VEPIPDREDRLKIRTFCFLEFDTHKEAAAIFNRH 880
            P  GVEIFVGGLTR++  +ML DWF H GE+TEVR+ARDKRRRRCRGYG+VRF  S+QAN AIE+M  ++FK G +LG+LPSDENRTL+V G+C+ WS   +         G+++                          ++ + DRE   ++R FCF+EFDTH+ A +   R+
Sbjct:  230 PPPGVEIFVGGLTRASSAEMLYDWFCHLGEITEVRVARDKRRRRCRGYGFVRFRNSEQANLAIEAMQGYQFKKGCYLGMLPSDENRTLYVSGMCQSWSQDQVHAYFSANFEGVKRQVELCAARDAAARRAPLCWRRVASIRMQLVWDRETPSRLRPFCFVEFDTHEHATSAHARY 404
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BLAST of mRNA_H-elongata_contig8783.16313.1 vs. uniprot
Match: A0A836CKV5_9STRA (RRM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKV5_9STRA)

HSP 1 Score: 159 bits (402), Expect = 1.130e-35
Identity = 82/169 (48.52%), Postives = 108/169 (63.91%), Query Frame = 2 
Query:  434 PKRGVEIFVGGLTRSTRRDMLRDWFQHAGEVTEVRIARDKRRRRCRGYGYVRFATSDQANRAIESMHRFEFKHGRFLG-------------------VLPSDENRTLFVGGLCEEWSCQYITTLLKERMPGLRKVEPIPDREDRLKIRTFCFLEFDTHKEAAAIFNRHQ 883
            P  GVEIFVGGLTRS+ R++L D F H G++TEVRIARDKRRRRCRGYG+VRF TS+QAN A+ESM  F+FK G +L                    VLPSDENRTL+  G+ E+ S   +   L     G++++  +  +ED  K+R FCF+EF T+++AA     H+
Sbjct:  151 PCPGVEIFVGGLTRSSTRELLYDCFSHIGDITEVRIARDKRRRRCRGYGFVRFRTSEQANMAVESMQAFQFKRGCYLSALLNAKKIAXXXXXXXXXXVLPSDENRTLYACGIEEDVSPDAVCWFLTRSFEGIKRIHLMWGKEDVCKLRPFCFIEFHTNEQAAVALLSHR 319
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BLAST of mRNA_H-elongata_contig8783.16313.1 vs. uniprot
Match: A9STT2_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9STT2_PHYPA)

HSP 1 Score: 101 bits (252), Expect = 1.030e-19
Identity = 61/159 (38.36%), Postives = 91/159 (57.23%), Query Frame = 2 
Query:  416 PRREFVPKRGVEIFVGGLTRSTRRDMLRDWFQHAGEVTEVRIARDKRRRRCRGYGYVRFATSDQANRAIESMHRFEFKHGRFLGVLPSDENRTLFVGGLCEEWSCQYITTLLKERMPGLRKVEPIPDRED-RLK--IRTFCFLEFDTHKEAAAIFNRHQ 883
            P  E    + +E+FVGGL + T  + L   F   G+V EVR+ ++ +  + +GY ++RFA++  A RA   + R E + GR  GVLPS+EN TLF+G + + W  + +   LK+    +  VE I   ED +L+   R F F+EF+THKEA   F R Q
Sbjct:    8 PISERRKHKKLEVFVGGLDKETTEEELESVFGRVGDVVEVRLMKNAQTGKNKGYAFIRFASAAIAKRASHDLERVEIR-GRSCGVLPSEENDTLFLGNISKLWKKETVLETLKKF--AIENVEDITLMEDPQLEGVNRGFAFIEFNTHKEALNAFRRLQ 163
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BLAST of mRNA_H-elongata_contig8783.16313.1 vs. uniprot
Match: A0A803NB38_CHEQI (Uncharacterized protein n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803NB38_CHEQI)

HSP 1 Score: 105 bits (263), Expect = 1.290e-19
Identity = 56/155 (36.13%), Postives = 86/155 (55.48%), Query Frame = 2 
Query:  422 REFVPKRGVEIFVGGLTRSTRRDMLRDWFQHAGEVTEVRIARDKRRRRCRGYGYVRFATSDQANRAIESMHRFEFKHGRFLGVLPSDENRTLFVGGLCEEWSCQYITTLLKE-RMPGLRKVEPIPDREDRLKIRTFCFLEFDTHKEAAAIFNRHQ 883
            +E   K+ +EIFVGGL R    D ++  F+  GEV EVR+ +D    + RG+ +VRFAT DQA RA+  M     + G+  G  P+++N TLF+G +C  W+ + I   LK+  + G+  +  + D       R FCF++F  H +A   + R Q
Sbjct:  245 KERKVKKELEIFVGGLDREVIEDDVKKTFEKVGEVVEVRLLKDTLTNKNRGFAFVRFATKDQAKRALSEMKNPVIR-GKRCGTAPNEDNDTLFLGNVCNTWTKEAIKQKLKDYSVEGVENITLVQDPRHEGLSRGFCFIQFACHADAMFAYKRLQ 398
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BLAST of mRNA_H-elongata_contig8783.16313.1 vs. uniprot
Match: A0A7C9F016_OPUST (Uncharacterized protein (Fragment) n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9F016_OPUST)

HSP 1 Score: 106 bits (264), Expect = 2.110e-19
Identity = 58/155 (37.42%), Postives = 85/155 (54.84%), Query Frame = 2 
Query:  422 REFVPKRGVEIFVGGLTRSTRRDMLRDWFQHAGEVTEVRIARDKRRRRCRGYGYVRFATSDQANRAIESMHRFEFKHGRFLGVLPSDENRTLFVGGLCEEWSCQYITTLLKE-RMPGLRKVEPIPDREDRLKIRTFCFLEFDTHKEAAAIFNRHQ 883
            +E   K+  EIFVGGL R    D L+  F+  GEV EVR+ +D    + RG+ +VRFAT DQA RA+  M     + G+  G  P+++N TLFVG +C  W+ + I   LK+  + G+  +  + D       R FCF++F  H +A   + R Q
Sbjct:  326 KERRVKKEHEIFVGGLDREVVEDDLKKAFEKVGEVVEVRLLKDPLTNKNRGFAFVRFATKDQAKRALSEMKNPVIR-GKRCGTAPNEDNDTLFVGNICNTWTKEAIKQKLKDYSVEGVENITLVQDPRHEGLSRGFCFIQFACHADAMFAYKRLQ 479
[Close]
BLAST of mRNA_H-elongata_contig8783.16313.1 vs. uniprot
Match: A0A803NC05_CHEQI (Uncharacterized protein n=2 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803NC05_CHEQI)

HSP 1 Score: 105 bits (263), Expect = 3.940e-19
Identity = 56/155 (36.13%), Postives = 86/155 (55.48%), Query Frame = 2 
Query:  422 REFVPKRGVEIFVGGLTRSTRRDMLRDWFQHAGEVTEVRIARDKRRRRCRGYGYVRFATSDQANRAIESMHRFEFKHGRFLGVLPSDENRTLFVGGLCEEWSCQYITTLLKE-RMPGLRKVEPIPDREDRLKIRTFCFLEFDTHKEAAAIFNRHQ 883
            +E   K+ +EIFVGGL R    D ++  F+  GEV EVR+ +D    + RG+ +VRFAT DQA RA+  M     + G+  G  P+++N TLF+G +C  W+ + I   LK+  + G+  +  + D       R FCF++F  H +A   + R Q
Sbjct:  542 KERKVKKELEIFVGGLDREVIEDDVKKTFEKVGEVVEVRLLKDTLTNKNRGFAFVRFATKDQAKRALSEMKNPVIR-GKRCGTAPNEDNDTLFLGNVCNTWTKEAIKQKLKDYSVEGVENITLVQDPRHEGLSRGFCFIQFACHADAMFAYKRLQ 695
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BLAST of mRNA_H-elongata_contig8783.16313.1 vs. uniprot
Match: UPI00053FBE2C (nucleolin-like isoform X1 n=2 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053FBE2C)

HSP 1 Score: 105 bits (262), Expect = 4.070e-19
Identity = 57/155 (36.77%), Postives = 85/155 (54.84%), Query Frame = 2 
Query:  422 REFVPKRGVEIFVGGLTRSTRRDMLRDWFQHAGEVTEVRIARDKRRRRCRGYGYVRFATSDQANRAIESMHRFEFKHGRFLGVLPSDENRTLFVGGLCEEWSCQYITTLLKE-RMPGLRKVEPIPDREDRLKIRTFCFLEFDTHKEAAAIFNRHQ 883
            +E   K+ +EIFVGGL R    D ++  F+  GEV EVR+ +D    + RG+ +VRFAT DQA RA+  M       G+  G  P+++N TLF+G +C  W+ + I   LKE  + G+  +  + D       R FCF++F  H +A   + R Q
Sbjct:  336 KERKVKKELEIFVGGLDREVVEDDVKTAFEKVGEVVEVRLLKDPSTNKNRGFAFVRFATKDQAKRALSEMKN-PVICGKRCGTAPNEDNDTLFLGNVCNTWTKEAIKQKLKEYSVEGVENITLVQDPRHEGLSRGFCFIQFACHADAMFAYKRLQ 489
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BLAST of mRNA_H-elongata_contig8783.16313.1 vs. uniprot
Match: A0A0D6QWI2_ARACU (Uncharacterized protein n=2 Tax=Araucaria cunninghamii TaxID=56994 RepID=A0A0D6QWI2_ARACU)

HSP 1 Score: 105 bits (262), Expect = 4.280e-19
Identity = 56/155 (36.13%), Postives = 92/155 (59.35%), Query Frame = 2 
Query:  422 REFVPKRGVEIFVGGLTRSTRRDMLRDWFQHAGEVTEVRIARDKRRRRCRGYGYVRFATSDQANRAIESMHRFEFKHGRFLGVLPSDENRTLFVGGLCEEWSCQYITTLLKER-MPGLRKVEPIPDREDRLKIRTFCFLEFDTHKEAAAIFNRHQ 883
            +E   K+ +E+FVGGL +    + +R  F   GEV EVR+ R+    + +G+ +VRFAT++QA RA++ M     + G+  GV PS++N TLF+G +C+ W+ + +   LK+  + GL ++  + D ++    R F FLEF TH +A   + R Q
Sbjct:  270 QERRKKKELEVFVGGLDKDAVEEDIRKVFLPIGEVLEVRLLRNPLTNKNKGFAFVRFATTEQAKRAVDEMKNPVIR-GKRCGVAPSEDNDTLFLGNICKTWTKEAVKNKLKDYGVDGLEELTLVGDTQNEGLSRGFAFLEFSTHYDAMNAYKRLQ 423
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8783.16313.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9D0_9PHAE4.720e-8666.28RRM domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FYA2_ECTSI1.290e-6861.88RRM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A836CJD8_9STRA4.130e-3946.86RRM domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A836CKV5_9STRA1.130e-3548.52RRM domain-containing protein n=1 Tax=Tribonema mi... [more]
A9STT2_PHYPA1.030e-1938.36Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A0A803NB38_CHEQI1.290e-1936.13Uncharacterized protein n=1 Tax=Chenopodium quinoa... [more]
A0A7C9F016_OPUST2.110e-1937.42Uncharacterized protein (Fragment) n=1 Tax=Opuntia... [more]
A0A803NC05_CHEQI3.940e-1936.13Uncharacterized protein n=2 Tax=Chenopodium quinoa... [more]
UPI00053FBE2C4.070e-1936.77nucleolin-like isoform X1 n=2 Tax=Beta vulgaris su... [more]
A0A0D6QWI2_ARACU4.280e-1936.13Uncharacterized protein n=2 Tax=Araucaria cunningh... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8783contigH-elongata_contig8783:2218..9240 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score242.3
Seed ortholog evalue5.3e-61
Seed eggNOG ortholog2880.D7FYA2
EggNOG free text desc.cytidine to uridine editing
EggNOG OGsKOG0117@1,KOG0117@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRNA recognition motif domain
Ec32 orthologEc-24_003230.1
Exons4
Model size4668
Cds size1611
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8783.16313.1prot_H-elongata_contig8783.16313.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig8783 2363..5449 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931279.4102287-UTR-H-elongata_contig8783:2217..23621622931279.4102287-UTR-H-elongata_contig8783:2217..2362Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8783 2218..2362 +
1691679771.174533-UTR-H-elongata_contig8783:2217..23621691679771.174533-UTR-H-elongata_contig8783:2217..2362Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8783 2218..2362 +
1622931279.5157225-UTR-H-elongata_contig8783:5449..65271622931279.5157225-UTR-H-elongata_contig8783:5449..6527Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8783 5450..6527 +
1691679771.2156427-UTR-H-elongata_contig8783:5449..65271691679771.2156427-UTR-H-elongata_contig8783:5449..6527Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8783 5450..6527 +
1622931279.5411985-UTR-H-elongata_contig8783:7406..92401622931279.5411985-UTR-H-elongata_contig8783:7406..9240Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8783 7407..9240 +
1691679771.2323186-UTR-H-elongata_contig8783:7406..92401691679771.2323186-UTR-H-elongata_contig8783:7406..9240Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8783 7407..9240 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931279.4296145-CDS-H-elongata_contig8783:2362..29801622931279.4296145-CDS-H-elongata_contig8783:2362..2980Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8783 2363..2980 +
1691679771.1882973-CDS-H-elongata_contig8783:2362..29801691679771.1882973-CDS-H-elongata_contig8783:2362..2980Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8783 2363..2980 +
1622931279.460631-CDS-H-elongata_contig8783:4385..51221622931279.460631-CDS-H-elongata_contig8783:4385..5122Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8783 4386..5122 +
1691679771.1969733-CDS-H-elongata_contig8783:4385..51221691679771.1969733-CDS-H-elongata_contig8783:4385..5122Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8783 4386..5122 +
1622931279.4917014-CDS-H-elongata_contig8783:5193..54491622931279.4917014-CDS-H-elongata_contig8783:5193..5449Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8783 5194..5449 +
1691679771.205586-CDS-H-elongata_contig8783:5193..54491691679771.205586-CDS-H-elongata_contig8783:5193..5449Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8783 5194..5449 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig8783.16313.1

>prot_H-elongata_contig8783.16313.1 ID=prot_H-elongata_contig8783.16313.1|Name=mRNA_H-elongata_contig8783.16313.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=537bp
MAPHQLFPYDEWGGLRTTRQFLKSDGSVTQNDLCTVAERTVLAGGAPKST
FGDQSKVAGADDCEALFFSDLDDAVDDDDDDGGVGPESNWPRREFVPKRG
VEIFVGGLTRSTRRDMLRDWFQHAGEVTEVRIARDKRRRRCRGYGYVRFA
TSDQANRAIESMHRFEFKHGRFLGVLPSDENRTLFVGGLCEEWSCQYITT
LLKERMPGLRKVEPIPDREDRLKIRTFCFLEFDTHKEAAAIFNRHQVNPP
PAQQQQPGYPTRNSLGQEKSPPSDIVKYTLKEHAFLGFERETRINSSGTA
SISGSSGDICGNGRGGGCSAVSVPESAECSGTRLASTPELVPWDATDVRR
AQGSVLTADANSMPRDSHRTFGSDWWLRSMKDLGGGDDSGSGGDENASGS
ATTPKPNVDGETFAAWEDPVEGKSDNGGKNNGQPLVVDGAVLKVDWADPL
RYHHARRCWKQFGEGWGSFCCEQASELRPGPLANLPVASGRAPAAGSFGG
QPHARAPHRVPAIPAAPEASASNTIYRASSRSSPLP*
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mRNA from alignment at H-elongata_contig8783:2218..9240+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig8783.16313.1 ID=mRNA_H-elongata_contig8783.16313.1|Name=mRNA_H-elongata_contig8783.16313.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7023bp|location=Sequence derived from alignment at H-elongata_contig8783:2218..9240+ (Himanthalia elongata Himel1 dioecious)
GCTATTCGTACTACTGTACTTCGAAGTGGAGCTGTTGATATACGCACTTC
ATCAGTAACAACAGATGCTTCGGTCGGAAAGAGACCGATAAAGCCTCGCG
GAGAGGCCAGACCTTTCTCACACTCCCACAACCGTAACCTGAATCATGGC
ACCTCATCAGCTTTTCCCATACGATGAGTGGGGGGGACTACGTACAACGC
GACAATTCCTCAAGTCCGACGGCTCCGTTACTCAAAACGACTTGTGCACT
GTTGCTGAACGAACCGTCCTCGCTGGGGGGGCACCGAAATCGACATTTGG
CGATCAAAGCAAGGTCGCCGGCGCAGATGATTGCGAGGCCTTGTTCTTCA
GTGATCTCGATGACGCTGTCGACGATGATGATGATGACGGGGGCGTGGGA
CCCGAGTCTAATTGGCCCCGGCGTGAGTTCGTCCCTAAGCGTGGGGTGGA
GATTTTTGTTGGGGGACTCACACGCAGCACCAGGCGCGACATGCTTCGAG
ACTGGTTTCAACATGCTGGCGAGGTAACTGAGGTGCGCATTGCCCGGGAC
AAACGACGGCGTAGGTGTCGAGGATACGGGTACGTGCGCTTCGCCACCAG
CGATCAAGCAAACCGAGCCATCGAGTCGATGCACCGCTTCGAGTTCAAGC
ACGGAAGGTTCCTGGGCGTGTTGCCCTCTGACGAGAACCGGACCCTCTTC
GTCGGAGGCCTCTGCGAAGAGTGGAGCTGTCAGTACATCACAACCCTTCT
AAAGGAAAGAATGGTGAGAGGGCGTAGAGAAATATTATGATGCGATGGAC
AATCTTGGTTCGTCTAGCTGCACTGAATTTCTAGAGCCGAGGGCTGGGGC
ACAGGGGACCCGGAATACGAGGGCTATAAAATATCGGTTCCAGCGATGAT
GAGCTCTCTAGTTTTCTTTTCCAGTAGGCCAGAGCTGGACCCTCGATTGC
CTTACGGTTTCTTTTTTTTTCTTTTTTCTTTTCCCCAGTTTCTCTGGCTA
ACTTTCTCTGTACCCTCTAATTTTAAGTAAAGTATTACCAAATTATACGT
CCAGTATATGTTTCCCCCTGTTCGATTCCCCGCCCTCTCCCTCCCTGAGA
TTCATGAGACCTGAATCTTGCCACTCGATCTGATTTTTACATTCTAAATT
CAATACAAAAATGAAATCCAGTTCCAGTTCCTAAAAGGTTAATCGGAAAC
ACTGTTACCCACGGAGTTGGCCCCCTTTTTTCTAAGAACAATCAGCTATT
CCTCTAATACTTGTACTGTATAGTTAATAAAAGTGAATTTAGCAAAGTAT
TTTACTTTTGTGTCACCCTTTTTTCTCAAGTGCTTCTTTTTCTTTGCTTT
TTTTCTGATATGTAGAACACGGCAGAGGTGGTGGCGAGGTGAAGGTGTGT
GCCCAGCTCGCCTCTCCATATTGAACTTTGGGGAGACATAAGCTCTTGGG
CCCCGAGGTCGGGCGGGATTGGTAACCCACCAGGTTGATTGGCAAAAAAA
GTGAGATCAAGAAAAACAACGAAAAACATAACCATGCAATTTGCCGGGTC
TTCTCCAAAAGTTCCGTAACAGCACCGTTGCAGAGGAAGTTCTGTCGCGT
GCCCACAAATGCAAGGACGGTCACTGCAAATATAGCAAATTGTATAGCAG
ATTAGAACTACTGACTGACCAAGTGATGATTCTAAAATATAAATTATATC
TTATCATAAGTTTTTTAATGCAAATAATTGTAATAAATAATATTGGATTG
CCAGTAGAGGAAGTGTAAAGCAAGAAGGAATCAGATTGTATGGTTAGCAA
TGCGCGGAGGAGGCTTGTTAAACATATTTCATGACCCCTGAACTGAAACG
TACTGATTCAGATTCGAGCCTTAGCGATGGGAATCCATTGTGTCCGCCCG
TCTCGACCCTCACGTTCCGGCTGCATTCTTAGCCCCCAACAACGACAGTC
CCTGTCGGCCAGGATAGCCAGTTCTACACATGCTCATATTACTGAAATAG
TGTCGCCGAAATTAGTATCCTATTCTACAGTATTTCCTACGAAACAAAAA
TGCCGCAATGGTAGCCCCCGCGCTCAGTGGCCTCACCAACCCGCCCCCGC
TCGAATCCCGCCTTTCCCTTAAAATCATCGAACTCCCATCACCTTTCGAT
AATATAACCGTTGCACAGCCCGGCCTGAGGAAGGTGGAGCCCATCCCCGA
TCGAGAAGATCGTCTCAAGATCAGGACCTTCTGCTTCCTGGAGTTTGATA
CTCATAAAGAGGCGGCGGCGATCTTCAACCGACACCAGGTCAACCCGCCC
CCCGCACAGCAGCAGCAGCCCGGCTACCCAACGCGCAACTCGCTGGGCCA
GGAAAAATCTCCTCCTTCAGACATTGTCAAGTACACCCTGAAGGAACACG
CCTTCCTCGGATTCGAAAGAGAGACGCGGATCAACAGCAGTGGTACGGCG
AGCATCTCCGGTAGTAGCGGTGACATTTGCGGGAACGGACGCGGAGGTGG
CTGCAGCGCGGTAAGCGTCCCCGAGAGCGCCGAATGCAGTGGCACTCGTC
TAGCTTCGACCCCCGAACTTGTGCCGTGGGATGCCACCGACGTCCGCCGA
GCTCAAGGGTCGGTCCTCACCGCAGACGCGAACAGCATGCCCAGAGACTC
TCACCGCACTTTTGGAAGCGACTGGTGGCTGCGCTCCATGAAAGACCTTG
GCGGCGGTGATGACAGTGGTAGTGGCGGAGACGAAAACGCCTCAGGTTCT
GCAACAACCCCGAAGCCGAACGTCGATGGTGAGACTTTTGCCGCGTGGGA
AGATCCCGTGGAGGGGAAGAGCGATAACGGGGGCAAGAACAACGGGCAAC
CGTTGGTGGTCGACGGGGCAGTGCTCAAGGTAGACTGGGCCGACCCGCTC
CGCTACCACATTCATCTCAATGGAGGCATCAAGGGGCCTCCGGCTTCCCC
AGAGATCGGAATGCCTGACGGTCGGTCCACCACGCGCGTCGGTGTTGGAA
GCAGTTCGGCGAGGGGTGGGGTTCCTTCTGTTGTGAGCAGGCGAGCGAGC
TACGGCCAGGGCCCTTGGCAAATCTCCCCGTTGCTTCCGGCCGGGCCCCC
GCAGCGGGGTCGTTTGGAGGGCAACCACACGCTCGCGCACCGCACCGAGT
ACCAGCAATACCCGCCGCACCAGAAGCTTCCGCATCAAACACAATTTATA
GAGCATCATCACGCTCCTCACCCCTACCCTAACCACCGCTCCGATTTCCT
CTCCGGTGGTCGCCACCGCTCCCCATCACCGCATCATCTTGGGTCAGCCT
ACCGTGGCCCGTCGACGACGACTTCGCAGCCCGTTTCGACCACGGGGGAT
CGGGGATACGCTGTCTCGGACCCGACGGTCTCTGGCGCCCCTCGGGTGCC
CCCGTTCTACGTCGACGGCGCCTCCATTGCGCTACTCCACGGGCAGCAGC
AGCAAGACATTGTGAGTAGGACGAGGACAGCGCACCGCGGCTTCCCTCCC
TGCCAGCCTCACCTTGACGAGCAGGAAAACGGCGTGCGTCTCCGCCGGCA
GCCAGATGCTGCTGTCGCACGGCGCTTGCAAGTGCCCGCCCATGATCAGT
TTCAGGTGCGTGGTGTGGCGTACAGCGACCGCCCTCGCCTTCCCTCGCCC
TTGTGCGATGGTTACCACCACGACCGCGACCAAGCCCGGAGGCCTCTGTT
TCGCGAGGTTGACTCCGCTAGCGTCATCGTTGGAGAGACTGGTGGGGCGG
GAGAAGTGGCTAGACCAAGAGGCCATCGCGATGTTGCTCCTCTGGGTGGA
CCCACTTACAGCGCCGCCCCGGGATCACCCGTCGAGCGCCACCAAAGCTA
CTTCCAGGGCTTTCCGAGCAGCACCGGACGCGGAGCTATCTGTTCGCCTA
TCAAGACGCTCTCGCGCAGCCTTCCGTACCAGCGTCCGAGTGCGCACGAG
ATTTCTCGTCGAGGCTCGCTGCCGTCGCCGTCACCTTGGGACCGTCAGGT
AATGGAAGACATCGCGAATTCAGGCAACCAGATGATGACAATTCAGTCCA
ATCGTTTGGATTCCGGCGAGCAGCCGGAGGCGTTTGAGAATAGGGAGCGC
GGAGACAGTCGGGCGTTGGAGGCCTACCTCGACCACTTAGGAGCCCCGCG
TTCAGACGTGGAGGGCAGGAGGAGGCACGCTGGGGTTCACGGCGTGCAAC
AGCAGCAGTTACAGCGGAAGCAGAAGCATCAGCTGTACCAACGCGAGCGC
TGGGAACAGGGCTGGACAAGCGGAATGGGAGACCACCATTGTCGTCAGGG
AATCACGCAGGTTAGATGGTCCTCTCCCGTGCGCGCGGTCGATCGTTTTG
TATCTTTTTAGACTCCCGTGTGCGTATCGCCGCATTGTGTTTCCGTTGTC
GATAAGGGGGGGGGGTGTTCTTACAGTTTTCCTTATTCGTAGACTGGCAA
TCTGCGCTCGCGCAAGGTTTTCTCGCCTGACACACGAGTGGAAAGGATTC
TTCACGAGAAGACTCGTGGTGTGTGCCGACGCTTAAAAAGACCTAGCCCC
GGAGCGCGCATGCTGCTCAACCCTCTCCCCCCAACCTACCGCTCTGTTTT
CTTCCACGCTTGCCCCCCCCCCCAGTTTTCCTAAAACAAACTTTGCATTT
CTTTTGTGCGTTTGCAGCGACGCATCTATTTTCCGGGCGCGTTTAAAGTT
TGTTTGTCCTCACAGTGTGCGCGATATTTTATCCTCCCCCCTGAAGCCGT
GAACATCCCCTCCGCCCTCCCTCCCCTCCTCGCCCATCCTTCCGTCGATG
CGGTGAATAATCCAATATCTAAGACATGCAAAACTTGCCCCCCCACTTCC
CTCCTAGCCTGAGTCACTCGCATGCATACAATGCCCCCCCTCCCCCTCCC
CCCGAATAATTGGGGTGTTAAAGATTATCTGACAATGCTGACATTTGTTA
GTTTCGAAGCGAAACCCGCCCTTACAAAAACAAGCCAAGTCGGGCCGGGC
CACCTAATAAACGTCCGCCAATCAAACGAGGATATAGGTTACTATAACCA
ATCAATGAAAGAACCATTTTCACTAACCAACCAGTCAAATCCAACATGTC
CCTTCTTCTTCAGCCCCCGAGTTCGTAACGCCCTCTTATACTTTTTTCCT
GGCTCCCCCTCTTTTTTTGTTCGATGCCTGTCGCCGCAGGACCGAGAATC
GGCAGCAAACAATGGGGTTCCGCGGCCTGGCGGTGGAGGTCACTTTCGCC
TCTTGATGTCCGACCACGGCTCCAACCACCAGGGGAGCAACGGCACCTCG
TATCAACAGCGTGAGTGTCACCCCAGCGTGCAACCCCACCGCGGCGGCAT
CCCGGGAGGGGTGAGAGGAGGAGAACGAACGGACAGGTCCTACATGGGCG
AGCGTCCTAGCAGCGGTGGCCGCGACAAGCCTCCTCCGGGGTTTTCGACG
TCCGCGGTGGGGTATCCCATGGAAGGATATTTGACGACGCCTTACCACGC
GGAGGCGGCCGGTCGATGGTCCGCTGGAAGGGGCGGCAGCAATAACGGTG
ATTGGCAGCTCGGATCGGGGTGCGGCACCCCGGTGGTGCGGCGCAGCAGC
AGCGGTGGAAGTGGCAGCAGCTGCGGCAGTGGTAGTGGCAGTCCCTTAGA
AGCGGAGACCTCCCCTGAGCAAGCGCGTGGTCCGCCCAAAAGCTTGGGAA
GGGGACGCGGACCCATGGAAGAAGGCCTTGGAGCTGGGCTCTGGGAAGCG
ATCGGGGCGGTAGAGCAGGGGCTTGATGGCGTCACGCAGCCGTCGCCATG
GCCATGGTCAAGTTCTCGCGGTGTCGAGGACAGCGACGCGTGGGCTCCGT
GATGTTAATGAAGTAGACAGACAGAGCGACCGAAAGCGCTTTGCGGAGAG
TGCAGAATATCGGGTGGAGATGGAAGTAAAAGCCTCGGAGCAGAAATCGT
GGTTAATGAAAAAAAGAAGCTATAAGATTTTTCGTTGTGAAACCAATTTG
AGGTTTGGGGGAAAGTAGCGTACAGATTCATTGCGTAATGTAGCCTTAGG
GTCGGTCGGTCAGTCGGTCAATCAATCATCCTTCTGTAAAAAAAGTTGGG
AGTACGGCGCTCGATAATCCGCAAATTTCCCTCTCTAGTTGAGAAAGGAT
GGAATTGGGGACGGGGGGGAGGGATGTTCAAAGGGTTTGAAGTGTTGAGG
AAAGGACGATTCTTCCCGGCGCCGCTTAGCAAGTTGTTTGACGAGTCCTT
TTATTTGTTTCTCGCACAGTGTCCTGGGGGGTTGGCTTGGCTCGGCTCGG
CTCGAACGCACGCACGCGCGGAGATCATTAGGCCCTGTCTGCCCTGTTTT
GGGGGATTTCTCTGGTTTTAAACGCACAGGACATCCGAGTAGAAGATATT
TCCCCAGAGTGAATCGAGAATATATGTAAATGGCAACGTTATTGGAGCCC
CCTCTACACAAAAAGAAAATATAAATATTGGAAATTACTGAGGGAGGAGG
GGAAGGAGGCGTGTCAATCTCGAACGCGATTGAGCACATCGACAATACAG
TACGCTGTTTTGCCGGAGGAGGCGTGGTCTTTGGGGGAAGGCGGAGGGTT
GTCCCCACTCTTAACTTCGAGTTGAGGCCATCCTCTGTAGTATCATTCCG
TGAGCAGGGTTTTCACATCGGGCAAAAGCGCGCGGGAATCGGAAGTCTCT
CCGTCCTGTCCCCTTTTTTGCGATCGCGTGCAGTGGAGCGGCGACTAGCA
AACCGTTCGCAACCGCCGTGGTTCTGGCTTGAGGGAGGGCCTGTTACTGG
TCGGGCATTTTTTTTTCGGGGTTTTTTAAGGCCGGGCCGCCCTTCCCTTT
TTTACTTACATTCCAGGCTTTATTTTTTTTAAAGGGAAGGGGATAGGGGA
TGATGGAATGATGCTGCGTCGGAGGACGACAGGCGTGAAAGAAGGGAAAG
CTTCTACGTCTTGTTTTTTAGGGTTTTCCCTTTTGGCTGGTGGCGTCAGC
TCGCGTTGGCCCGCCCTGGACAT
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Coding sequence (CDS) from alignment at H-elongata_contig8783:2218..9240+

>mRNA_H-elongata_contig8783.16313.1 ID=mRNA_H-elongata_contig8783.16313.1|Name=mRNA_H-elongata_contig8783.16313.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3222bp|location=Sequence derived from alignment at H-elongata_contig8783:2218..9240+ (Himanthalia elongata Himel1 dioecious)
ATGGCACCTCATCAGCTTTTCCCATACGATGAGTGGGGGGGACTACGTAC
AACGCGACAATTCCTCAAGTCCGACGGCTCCGTTACTCAAAACGACTTGT
GCACTGTTGCTGAACGAACCGTCCTCGCTGGGGGGGCACCGAAATCGACA
TTTGGCGATCAAAGCAAGGTCGCCGGCGCAGATGATTGCGAGGCCTTGTT
CTTCAGTGATCTCGATGACGCTGTCGACGATGATGATGATGACGGGGGCG
TGGGACCCGAGTCTAATTGGCCCCGGCGTGAGTTCGTCCCTAAGCGTGGG
GTGGAGATTTTTGTTGGGGGACTCACACGCAGCACCAGGCGCGACATGCT
TCGAGACTGGTTTCAACATGCTGGCGAGGTAACTGAGGTGCGCATTGCCC
GGGACAAACGACGGCGTAGGTGTCGAGGATACGGGTACGTGCGCTTCGCC
ACCAGCGATCAAGCAAACCGAGCCATCGAGTCGATGCACCGCTTCGAGTT
CAAGCACGGAAGGTTCCTGGGCGTGTTGCCCTCTGACGAGAACCGGACCC
TCTTCGTCGGAGGCCTCTGCGAAGAGTGGAGCTGTCAGTACATCACAACC
CTTCTAAAGGAAAGAATGATGGCACCTCATCAGCTTTTCCCATACGATGA
GTGGGGGGGACTACGTACAACGCGACAATTCCTCAAGTCCGACGGCTCCG
TTACTCAAAACGACTTGTGCACTGTTGCTGAACGAACCGTCCTCGCTGGG
GGGGCACCGAAATCGACATTTGGCGATCAAAGCAAGGTCGCCGGCGCAGA
TGATTGCGAGGCCTTGTTCTTCAGTGATCTCGATGACGCTGTCGACGATG
ATGATGATGACGGGGGCGTGGGACCCGAGTCTAATTGGCCCCGGCGTGAG
TTCGTCCCTAAGCGTGGGGTGGAGATTTTTGTTGGGGGACTCACACGCAG
CACCAGGCGCGACATGCTTCGAGACTGGTTTCAACATGCTGGCGAGGTAA
CTGAGGTGCGCATTGCCCGGGACAAACGACGGCGTAGGTGTCGAGGATAC
GGGTACGTGCGCTTCGCCACCAGCGATCAAGCAAACCGAGCCATCGAGTC
GATGCACCGCTTCGAGTTCAAGCACGGAAGGTTCCTGGGCGTGTTGCCCT
CTGACGAGAACCGGACCCTCTTCGTCGGAGGCCTCTGCGAAGAGTGGAGC
TGTCAGTACATCACAACCCTTCTAAAGGAAAGAATGCCCGGCCTGAGGAA
GGTGGAGCCCATCCCCGATCGAGAAGATCGTCTCAAGATCAGGACCTTCT
GCTTCCTGGAGTTTGATACTCATAAAGAGGCGGCGGCGATCTTCAACCGA
CACCAGGTCAACCCGCCCCCCGCACAGCAGCAGCAGCCCGGCTACCCAAC
GCGCAACTCGCTGGGCCAGGAAAAATCTCCTCCTTCAGACATTGTCAAGT
ACACCCTGAAGGAACACGCCTTCCTCGGATTCGAAAGAGAGACGCGGATC
AACAGCAGTGGTACGGCGAGCATCTCCGGTAGTAGCGGTGACATTTGCGG
GAACGGACGCGGAGGTGGCTGCAGCGCGGTAAGCGTCCCCGAGAGCGCCG
AATGCAGTGGCACTCGTCTAGCTTCGACCCCCGAACTTGTGCCGTGGGAT
GCCACCGACGTCCGCCGAGCTCAAGGGTCGGTCCTCACCGCAGACGCGAA
CAGCATGCCCAGAGACTCTCACCGCACTTTTGGAAGCGACTGGTGGCTGC
GCTCCATGAAAGACCTTGGCGGCGGTGATGACAGTGGTAGTGGCGGAGAC
GAAAACGCCTCAGGTTCTGCAACAACCCCGAAGCCGAACGTCGATGGTGA
GACTTTTGCCGCGTGGGAAGATCCCGTGGAGGGGAAGAGCGATAACGGGG
GCAAGAACAACGGGCAACCGTTGGTGGTCGACGGGGCAGTGCTCAAGGTA
GACTGGGCCGACCCGCTCCGCTACCCGGCCTGAGGAAGGTGGAGCCCATC
CCCGATCGAGAAGATCGTCTCAAGATCAGGACCTTCTGCTTCCTGGAGTT
TGATACTCATAAAGAGGCGGCGGCGATCTTCAACCGACACCAGGTCAACC
CGCCCCCCGCACAGCAGCAGCAGCCCGGCTACCCAACGCGCAACTCGCTG
GGCCAGGAAAAATCTCCTCCTTCAGACATTGTCAAGTACACCCTGAAGGA
ACACGCCTTCCTCGGATTCGAAAGAGAGACGCGGATCAACAGCAGTGGTA
CGGCGAGCATCTCCGGTAGTAGCGGTGACATTTGCGGGAACGGACGCGGA
GGTGGCTGCAGCGCGGTAAGCGTCCCCGAGAGCGCCGAATGCAGTGGCAC
TCGTCTAGCTTCGACCCCCGAACTTGTGCCGTGGGATGCCACCGACGTCC
GCCGAGCTCAAGGGTCGGTCCTCACCGCAGACGCGAACAGCATGCCCAGA
GACTCTCACCGCACTTTTGGAAGCGACTGGTGGCTGCGCTCCATGAAAGA
CCTTGGCGGCGGTGATGACAGTGGTAGTGGCGGAGACGAAAACGCCTCAG
GTTCTGCAACAACCCCGAAGCCGAACGTCGATGGTGAGACTTTTGCCGCG
TGGGAAGATCCCGTGGAGGGGAAGAGCGATAACGGGGGCAAGAACAACGG
GCAACCGTTGGTGGTCGACGGGGCAGTGCTCAAGGTAGACTGGGCCGACC
CGCTCCGCTACCACCACGCGCGTCGGTGTTGGAAGCAGTTCGGCGAGGGG
TGGGGTTCCTTCTGTTGTGAGCAGGCGAGCGAGCTACGGCCAGGGCCCTT
GGCAAATCTCCCCGTTGCTTCCGGCCGGGCCCCCGCAGCGGGGTCGTTTG
GAGGGCAACCACACGCTCGCGCACCGCACCGAGTACCAGCAATACCCGCC
GCACCAGAAGCTTCCGCATCAAACACAATTTATAGAGCATCATCACGCTC
CTCACCCCTACCCTAACCACCACGCGCGTCGGTGTTGGAAGCAGTTCGGC
GAGGGGTGGGGTTCCTTCTGTTGTGAGCAGGCGAGCGAGCTACGGCCAGG
GCCCTTGGCAAATCTCCCCGTTGCTTCCGGCCGGGCCCCCGCAGCGGGGT
CGTTTGGAGGGCAACCACACGCTCGCGCACCGCACCGAGTACCAGCAATA
CCCGCCGCACCAGAAGCTTCCGCATCAAACACAATTTATAGAGCATCATC
ACGCTCCTCACCCCTACCCTAA
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