prot_H-elongata_contig87811.16312.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig87811.16312.1
Unique Nameprot_H-elongata_contig87811.16312.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length107
Homology
BLAST of mRNA_H-elongata_contig87811.16312.1 vs. uniprot
Match: D7FZQ1_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZQ1_ECTSI)

HSP 1 Score: 194 bits (492), Expect = 9.540e-58
Identity = 92/107 (85.98%), Postives = 103/107 (96.26%), Query Frame = 0
Query:    1 VCTDIAARGLDMPDVDHVIMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLVKRDLILAAAIEQAVQAGMPLDELSSRRTDYADGARLGPLFGRQGKVARRGNHHALK 107
            VCTDIA+RGLDMPDVDHV+MFDFPLNPIDYLHRSGRTARMGAKGRVTSLL KRDL+LAAAIEQAVQ+G+PLDELSSRRTDYA G +LGPLFGR+GKV+ +G+HH+LK
Sbjct:  334 VCTDIASRGLDMPDVDHVVMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLAKRDLVLAAAIEQAVQSGLPLDELSSRRTDYATGGKLGPLFGRKGKVSVKGSHHSLK 440          
BLAST of mRNA_H-elongata_contig87811.16312.1 vs. uniprot
Match: A0A6H5KY63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY63_9PHAE)

HSP 1 Score: 194 bits (492), Expect = 1.160e-56
Identity = 92/107 (85.98%), Postives = 103/107 (96.26%), Query Frame = 0
Query:    1 VCTDIAARGLDMPDVDHVIMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLVKRDLILAAAIEQAVQAGMPLDELSSRRTDYADGARLGPLFGRQGKVARRGNHHALK 107
            VCTDIA+RGLDMPDVDHV+MFDFPLNPIDYLHRSGRTARMGAKGRVTSLL KRDL+LAAAIEQAVQ+G+PLDELSSRRTDYA G +LGPLFGR+GKV+ +G+HH+LK
Sbjct:  451 VCTDIASRGLDMPDVDHVVMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLAKRDLVLAAAIEQAVQSGLPLDELSSRRTDYATGGKLGPLFGRKGKVSVKGSHHSLK 557          
BLAST of mRNA_H-elongata_contig87811.16312.1 vs. uniprot
Match: A0A7S3XYE8_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYE8_HETAK)

HSP 1 Score: 149 bits (377), Expect = 1.530e-41
Identity = 69/107 (64.49%), Postives = 88/107 (82.24%), Query Frame = 0
Query:    1 VCTDIAARGLDMPDVDHVIMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLVKRDLILAAAIEQAVQAGMPLDELSSRRTDYADGARLGPLFGRQGKVARRGNHHALK 107
            V TDIAARGLD+PDV+HV+MFDFPLNP+DYLHRSGRTARMGA G VTS+L KRD +LA AIE AV+ G+PLD L++ + DY +G +L  + GR+GK + +GN+H+ K
Sbjct:  240 VATDIAARGLDVPDVEHVVMFDFPLNPVDYLHRSGRTARMGASGMVTSVLAKRDRVLAGAIEAAVRKGLPLDTLTASKRDYQEGKKLAEVVGRRGKASGQGNNHSFK 346          
BLAST of mRNA_H-elongata_contig87811.16312.1 vs. uniprot
Match: A0A836CEI1_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEI1_9STRA)

HSP 1 Score: 142 bits (357), Expect = 7.860e-38
Identity = 69/95 (72.63%), Postives = 79/95 (83.16%), Query Frame = 0
Query:    1 VCTDIAARGLDMPDVDHVIMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLVKRDLILAAAIEQAVQAGMPLDELSSRRTDYADGARLGPLFGRQG 95
            V TD+AARGLD+P+V HVIMFDFPLNP+DYLHRSGRTARMGA+GRVTSLL KRD +LAAAIE AV AG PLD L++RRTDY  G +L    G +G
Sbjct:  338 VATDVAARGLDLPEVGHVIMFDFPLNPVDYLHRSGRTARMGARGRVTSLLAKRDRVLAAAIEAAVLAGRPLDALTARRTDYLPGGKLAAKSGSRG 432          
BLAST of mRNA_H-elongata_contig87811.16312.1 vs. uniprot
Match: A0A4D9D2M2_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2M2_9STRA)

HSP 1 Score: 140 bits (354), Expect = 6.330e-37
Identity = 70/107 (65.42%), Postives = 86/107 (80.37%), Query Frame = 0
Query:    1 VCTDIAARGLDMPDVDHVIMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLVKRDLILAAAIEQAVQAGMPLDELSSRRTDYADGARLGPLF-GRQG-KVARRGNHHA 105
            VCTDIA+RGLDMP V+HV+MFDFPLNPI+YLHRSGRTARMGAKG+VTSLL KRD +LA+A++ AV  G+PLD LS+R+ DY  G +L  L  G+ G   + +GN HA
Sbjct:  440 VCTDIASRGLDMPFVEHVVMFDFPLNPIEYLHRSGRTARMGAKGKVTSLLTKRDKVLASAVQTAVAKGLPLDSLSARKRDYESGGKLSGLSSGKMGASPSSKGNRHA 546          
BLAST of mRNA_H-elongata_contig87811.16312.1 vs. uniprot
Match: A0A6U1QKZ5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1QKZ5_9STRA)

HSP 1 Score: 132 bits (332), Expect = 1.900e-36
Identity = 69/112 (61.61%), Postives = 85/112 (75.89%), Query Frame = 0
Query:    1 VCTDIAARGLDMPDVDHVIMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLVKRDLILAAAIEQAVQAGMPLDELSSRRTDYADGARLGPL--FGRQGKVAR-----RGNHHA 105
            VCTD+A+RGLDMP VDHV+MFDFPLNPID+LHRSGRTARMG  G VTS+L K D +LA AIE+A+   MPLD+LSSR+ DY D  +L  +   GR+ K A+     RGN+H+
Sbjct:   93 VCTDLASRGLDMPTVDHVVMFDFPLNPIDFLHRSGRTARMGRHGLVTSILTKGDRVLATAIERAILTNMPLDQLSSRKQDYGDRGKLHHMTKVGRR-KAAKAPKNKRGNNHS 203          
BLAST of mRNA_H-elongata_contig87811.16312.1 vs. uniprot
Match: A0A7S1UVX5_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UVX5_9STRA)

HSP 1 Score: 127 bits (318), Expect = 6.340e-35
Identity = 64/97 (65.98%), Postives = 74/97 (76.29%), Query Frame = 0
Query:    1 VCTDIAARGLDMPDVDHVIMFDFPLNPIDYLHRSGRTAR-----MGAKGRVTSLLVKRDLILAAAIEQAVQAGMPLDELSSRRTDYADGARLGPLFG 92
            V TD+AARGLD+P VDHV+MFDFPLNP+DYLHRSGRTAR         GRVT+L+ KRD +LA  IE+AVQ G PLD LSSR++DY  GARL  L G
Sbjct:   37 VATDLAARGLDVPQVDHVVMFDFPLNPLDYLHRSGRTARGVGGGRTGNGRVTALVCKRDKVLATGIERAVQRGEPLDGLSSRKSDYLPGARLNKLVG 133          
BLAST of mRNA_H-elongata_contig87811.16312.1 vs. uniprot
Match: A0A7S0CEE8_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CEE8_9STRA)

HSP 1 Score: 124 bits (312), Expect = 6.960e-34
Identity = 65/104 (62.50%), Postives = 74/104 (71.15%), Query Frame = 0
Query:    1 VCTDIAARGLDMPDVDHVIMFDFPLNPIDYLHRSGRTAR----------------MGAKGRVTSLLVKRDLILAAAIEQAVQAGMPLDELSSRRTDYADGARLG 88
            VCTDIAARGLD+P+VDHV+MFDFPLNPIDYLHR+GRTAR                    GRVT+L+ KRD +LA AIE AVQ G  LD LSSR+TDY  GA+LG
Sbjct:   27 VCTDIAARGLDVPEVDHVVMFDFPLNPIDYLHRAGRTARGVNQVQSESGQNGGVNRSGSGRVTALVAKRDRVLALAIEGAVQRGEALDGLSSRKTDYLPGAKLG 130          
BLAST of mRNA_H-elongata_contig87811.16312.1 vs. uniprot
Match: A0A7S2Y7S8_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y7S8_9STRA)

HSP 1 Score: 125 bits (315), Expect = 3.100e-32
Identity = 61/87 (70.11%), Postives = 72/87 (82.76%), Query Frame = 0
Query:    1 VCTDIAARGLDMPDVDHVIMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLVKRDLILAAAIEQAVQAGMPLDELSSRRTDYADGARL 87
            VCTD+AARGLD+P VDHVIMFDFPLN +DYLHRSGRTAR    GRVT+L+ KRD +LA AIE+AVQ G PLD L+SR++DY  G R+
Sbjct:  259 VCTDLAARGLDVPQVDHVIMFDFPLNAMDYLHRSGRTARGTLSGRVTALVSKRDKVLAHAIERAVQKGEPLDGLTSRKSDYLPGGRV 345          
BLAST of mRNA_H-elongata_contig87811.16312.1 vs. uniprot
Match: A0A1Z5K3P6_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K3P6_FISSO)

HSP 1 Score: 126 bits (317), Expect = 6.620e-32
Identity = 57/82 (69.51%), Postives = 72/82 (87.80%), Query Frame = 0
Query:    1 VCTDIAARGLDMPDVDHVIMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLVKRDLILAAAIEQAVQAGMPLDELSSRRTDYA 82
            VCTD+AARGLD+P VDHV++FDFPLN +DYLHR+GRTAR G KG+VT+L+ KRD +LA AIE+AV +G P+D LSSR++DYA
Sbjct:  435 VCTDLAARGLDIPTVDHVVLFDFPLNALDYLHRTGRTARQGQKGKVTALVAKRDKVLANAIERAVTSGQPIDGLSSRKSDYA 516          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig87811.16312.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZQ1_ECTSI9.540e-5885.98DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5KY63_9PHAE1.160e-5685.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3XYE8_HETAK1.530e-4164.49Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A836CEI1_9STRA7.860e-3872.63DEAD box helicase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A4D9D2M2_9STRA6.330e-3765.42Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A6U1QKZ5_9STRA1.900e-3661.61Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1UVX5_9STRA6.340e-3565.98Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S0CEE8_9STRA6.960e-3462.50Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2Y7S8_9STRA3.100e-3270.11Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A1Z5K3P6_FISSO6.620e-3269.51Uncharacterized protein n=2 Tax=Fistulifera solari... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..85
e-value: 1.2E-24
score: 89.1
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 1..77
NoneNo IPR availablePANTHERPTHR24031:SF407coord: 1..77
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 1..41
e-value: 2.2E-14
score: 53.7
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 1..82
score: 13.497
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig87811contigH-elongata_contig87811:142..2416 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig87811.16312.1mRNA_H-elongata_contig87811.16312.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig87811 142..2416 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig87811.16312.1 ID=prot_H-elongata_contig87811.16312.1|Name=mRNA_H-elongata_contig87811.16312.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=107bp
VCTDIAARGLDMPDVDHVIMFDFPLNPIDYLHRSGRTARMGAKGRVTSLL
VKRDLILAAAIEQAVQAGMPLDELSSRRTDYADGARLGPLFGRQGKVARR
GNHHALK
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase