prot_H-elongata_contig87740.16305.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig87740.16305.1
Unique Nameprot_H-elongata_contig87740.16305.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length119
Homology
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BLAST of mRNA_H-elongata_contig87740.16305.1 vs. uniprot
Match: D7G8T8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8T8_ECTSI)

HSP 1 Score: 151 bits (382), Expect = 1.770e-43
Identity = 75/96 (78.12%), Postives = 82/96 (85.42%), Query Frame = 0 
Query:    1 MRADSGLEPENFRGEGGPGKSKKKKKLILNFSENEFESLTELLEKADELNGVKWGSKVGVRGAGEKTFLQLGAASSILDWLSGEAQPGQYGELDTG 96
            +R DSGLEPENFRGEGGP  SKKKKK  LNFSENEFESL+ LL KAD+LNGVKWG + GVRG   KTFL++GAASSILDWLSGEAQ GQYG+LD G
Sbjct:  121 IRGDSGLEPENFRGEGGPHTSKKKKKRCLNFSENEFESLSALLRKADDLNGVKWGGRAGVRGGHGKTFLEMGAASSILDWLSGEAQQGQYGDLDLG 216
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BLAST of mRNA_H-elongata_contig87740.16305.1 vs. uniprot
Match: A0A6H5KKK5_9PHAE (DUF4211 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK5_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 4.200e-39
Identity = 74/96 (77.08%), Postives = 81/96 (84.38%), Query Frame = 0 
Query:    1 MRADSGLEPENFRGEGGPGKSKKKKKLILNFSENEFESLTELLEKADELNGVKWGSKVGVRGAGEKTFLQLGAASSILDWLSGEAQPGQYGELDTG 96
            +R DSGLEPENFRGEGGP  SKK+KK  LNFSENEFESL+ LL KAD+LNGVKWG + GVRG   KTFL++GAASSILDWLSGEAQ GQYG LD G
Sbjct:  840 IRGDSGLEPENFRGEGGPQTSKKEKKRCLNFSENEFESLSALLRKADDLNGVKWGGRAGVRGGHGKTFLEMGAASSILDWLSGEAQQGQYGGLDLG 935
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig87740.16305.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G8T8_ECTSI1.770e-4378.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KKK5_9PHAE4.200e-3977.08DUF4211 domain-containing protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 29..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig87740contigH-elongata_contig87740:502..1160 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig87740.16305.1mRNA_H-elongata_contig87740.16305.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig87740 445..1207 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig87740.16305.1 ID=prot_H-elongata_contig87740.16305.1|Name=mRNA_H-elongata_contig87740.16305.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=119bp
MRADSGLEPENFRGEGGPGKSKKKKKLILNFSENEFESLTELLEKADELN
GVKWGSKVGVRGAGEKTFLQLGAASSILDWLSGEAQPGQYGELDTGFGGA
RIEAEEDDDGEEKEEEFM*
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