prot_H-elongata_contig87713.16303.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig87713.16303.1
Unique Nameprot_H-elongata_contig87713.16303.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length442
Homology
BLAST of mRNA_H-elongata_contig87713.16303.1 vs. uniprot
Match: D7FIG3_ECTSI (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIG3_ECTSI)

HSP 1 Score: 310 bits (795), Expect = 3.990e-96
Identity = 205/490 (41.84%), Postives = 253/490 (51.63%), Query Frame = 0
Query:   10 CLGVAVFYSTRRFEKTAEMRVFFPEHAWRLRADSGQFGDGN--------------------------------------IGSDEG---SRLGDASTTSRLEEDLSSKHDTAVMVRLKLKKEWEGAGEVGRGGKRNLGVETRPGNADPSPSITLVNCHLWYHPARPDLKTAQCKLLFDAIRRFHRKCGVIAGSDNAGRSPGEKEDSLDGTSESRGEVGLGRHLAPANLILCGDFNSVPFVNPEFLPGSLKPQAEA------TAGLEDRATPEGFLTDGGIYPTYPSTDRTASGVYSLLAYGHVSASHPEHPDAFIPELVG-----------IEKTRG--YFTTSRAERIRWMSLGVTPSPHRPTGAWCSGFGSALEDVYRDRGVSAPRFTTKTSDFRGIIDHIFVSSGEKSSGLMVTGVLGFPEGADLSPEYVSDALSTSASAEQPGGDGSEFSQAPTAKNMPPRG--FGPIPDDIWGSDHLALGVEVSLL 437
            CLGVA+FYS+  FEK AE+RV F E    LR D G+ G+ +                                       G D G    R  D +T SRLE+DL+++HD A +VRL+LK+  +   E G  GK         G      S T+V  HL+Y P RPDLKTAQC++LF AI R H KCGV +                 G  ++  E+     L PANL+LC DFNS P V+P FLPG LK  A+A        G +D + P            YPS+  TASGVY LL YG V  +HPEHPD FIPE +            + K  G   +T  R  R R     V P+ HRP+G W SGFG  LED YRDRG  +P FTTKTS F GIIDHIFVS+GEK SGL ++GVL FP GA L+     +  S+    EQ G + +   Q   +   PP    FGPIP+ +WGSDHLALGVE+ LL
Sbjct:  164 CLGVAIFYSSTHFEKMAEVRVVFSEETLGLREDRGREGERSHSSRASELPEAVPAAPKATTTRAGKGAAPPCDQFLRRVYGGDTGRGAKREQDPATVSRLEQDLANRHDAAALVRLRLKESDDL--EEGASGKGXXXXXXENGR-----SFTVVCAHLFYDPNRPDLKTAQCQMLFQAIDRLHEKCGVASAL---------------GGGKAGSEI---PSLGPANLVLCADFNSKPLVDPWFLPGPLKAAAQARLQTTAAIGSQDPSAPTPGSQPNTSKDVYPSSQATASGVYCLLNYGCVPPTHPEHPDTFIPEWLKRKEQEEISRQELPKVGGGKLWTPRRTRRTR--GAPVVPAEHRPSGEWVSGFGGTLEDAYRDRGAVSPSFTTKTSSFSGIIDHIFVSTGEKDSGLAISGVLAFPPGAHLTEGR--ETTSSGEDLEQSGPEPTPDRQEEHSPTDPPAWGEFGPIPNKLWGSDHLALGVELVLL 624          
BLAST of mRNA_H-elongata_contig87713.16303.1 vs. uniprot
Match: A0A7S4DBB1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBB1_HETAK)

HSP 1 Score: 88.2 bits (217), Expect = 4.190e-15
Identity = 87/330 (26.36%), Postives = 125/330 (37.88%), Query Frame = 0
Query:  119 ITLVNCHLWYHPARPDLKTAQCKLLFDAIRRFHRKCGVIAGSDNAGRSPGEKEDSLDGTSESRGEVGLGRHLAPANLILCGDFNSVPFVNPEFLPGSLKPQAEATAGLEDRATPEGFLTDGGIYPTYPSTDRTASGVYSLLAYGHVSASHPEHPDAFIPELV-------------GIEKTRGYFTTSRAERIRWMSLGVTPSPHRPTGAWCSGFGSALEDVYRDRGVSAPRFTTKTSDFRGIIDHIFVSSGEKSSGLMVTGVLGFPEGADLSPEYVSDALSTSASAEQPGGDGSEFSQAPTAKNMPPRGFGPIPDDIWGSDHLALGVEVS 435
              +VN H ++ P  PD K  Q   +  A++ F     V+ G      SP EKE                      ++I CGD NSVP+V  E+LPG+ + +   T  +E   + + F     +    P +    S VY+LL +G V  SH +HPDA                   G+ +  G    S A R    S+G+   P      +  G G           +  P FTTKT+ F   ID+++   G K   ++V  +L FPE  +                                       F P+P+  WGSDHLALGV  S
Sbjct:  264 FVVVNMHNFFDPWFPDTKACQVAGVARALQIFLNDM-VLEGV----LSPDEKE--------------------KVHIIFCGDMNSVPYVQEEWLPGNKEMRYYQTKDIEILESSDKFALGRNV----PESAEDMSAVYALLHFGEVRPSHVQHPDALHLHRTTAAATKDSPGKQGGLAEKEGSSKGSAAGR----SVGLLEGPRGLRNLYMEGDGR----------MHLPSFTTKTNVFCATIDYLW---GTKD--VVVEQLLQFPENTER--------------------------------------FSPVPNQFWGSDHLALGVTFS 507          
BLAST of mRNA_H-elongata_contig87713.16303.1 vs. uniprot
Match: A0A6U5YHS5_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A6U5YHS5_GUITH)

HSP 1 Score: 70.5 bits (171), Expect = 2.550e-9
Identity = 86/325 (26.46%), Postives = 120/325 (36.92%), Query Frame = 0
Query:  114 DPSPSITLVNCHLWYHPARPDLKTAQCKLLFDAIRRFHRKCGVIAGSDNAGRSPGEKEDSLDGTSESRGEVGLGRHLAPANLILCGDFNSVPFVNPEFLPGSLKPQAEATAGLEDRATPEGFLTDGGIYPTYPSTDRTASGVYSLLAYGHVSASHPEHPDAFIPELVGIEKTRGYFTTSRAERIRWMSLGVTPSPHRPTGAWCSGFGSALEDVYRDR-GVSAPRFTTKTSDFRGIIDHIFVSSGEKSSGLMVTGVLGFPEGADLSPEYVSDALSTSASAEQPGGDGSEFSQAPTAKNMPPRGFGPIPDDIWGSDHLALGVEVSLL 437
            D S  I + N  L++HP  P +K  Q +L+  AI RF                              R    LG  +    ++LCGDFNSVP +  +FLP   +        L  R+         G   T  + +R+A  V  LL  G ++  HPEHPD F        K     +    +++R +      SP    G   +G    L+D Y    G  AP  TT T +F G ID+I+      S  ++   VL  P                         D S  S  P         F PIP+  + SDHLAL  +  L+
Sbjct:  341 DSSRLILVANTQLFWHPGFPHVKALQAELVCRAITRF------------------------------RDRHQLGERVP---VVLCGDFNSVPEMQIQFLPTRQREYL-----LSSRSQ--------GANGTLDAHNRSA--VVQLLRSGKLATDHPEHPDTFGRGWEAKGKPFSEMSKEEKKQMRDLKKSSYRSPSWSYGQLHTGL--LLQDTYEHMLGRPAP-LTTCTREFSGAIDYIW-----HSPQVVPCAVLELPY------------------------DVSSMSNVPNRSEQTL--FPPIPNQDFPSDHLALAADFELV 583          
BLAST of mRNA_H-elongata_contig87713.16303.1 vs. uniprot
Match: A0A835WGX7_9CHLO (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WGX7_9CHLO)

HSP 1 Score: 63.2 bits (152), Expect = 4.100e-7
Identity = 65/245 (26.53%), Postives = 97/245 (39.59%), Query Frame = 0
Query:  195 LILCGDFNSVPFVNPEFLPGSLKPQAEATAGLEDRATPEGFLTDGGIYPTYPSTDRTASGVYSLLAYGHVSASHPEHPDAFIPELVGIEKTRGYFTTSRAERIRWMSLGVTPSPHRPTGAWCSGFGSALEDVYRDRGVSAPRFTTKTSDFRGIIDHIFVSSGEKSSGLMVTGVLGFPEGADLSPEYVSDALSTSASAEQPGGDGSEFSQAPTAKNMPPRGFG--PIPDDIWGSDHLALGVEVSLL 437
            ++LCGDFNS                      L ++  P+ F       P  P   R  SGVY LL+ G ++  HP+HP            TR +     A  +  +  G   +P  P     S  G  L  +        P  TT+T+ F G +D++++S      GL VT  L  P     SP  ++   + +       G G+  S  P     P       P+P++ +GSDHLA+G EV  +
Sbjct:  234 VVLCGDFNS----------------------LAEKRQPDVFD------PQVPEGARQVSGVYQLLSGGTLAPDHPDHPH-----------TRVWKPGPMAPTV--IPAGGEGAPRFPALP-LSASGLRLGSLNALAFGREPPLTTRTATFAGTLDYVWLSQ----PGLEVTAALSLPFEDGGSPPLMAPGAAAA-------GPGAAASTQPGTWRDPVADVAMVPVPNEEYGSDHLAVGGEVQFV 425          
BLAST of mRNA_H-elongata_contig87713.16303.1 vs. uniprot
Match: A0A7S4C664_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C664_CHRCT)

HSP 1 Score: 57.0 bits (136), Expect = 4.060e-6
Identity = 41/162 (25.31%), Postives = 64/162 (39.51%), Query Frame = 0
Query:  119 ITLVNCHLWYHPARPDLKTAQCKLLFDAIRRFHRKCGVIAGSDNAGRSPGEKEDSLDGTSESRGEVGLGRHLAPANLILCGDFNSVPFVNPEFLPGSLKPQAEATAGLEDRATPEGFLTDGGIYPTYPSTDRTASGVYSLLAYGHVSASHPEHPDAFIPELV 280
            + +   HL++ P RP++K AQ +L+ +A  RF  +C                                     PA +++ GDFNSVP + PEF+            G++     E  + +  +           S VY L + G   A HPEHPD F P+ +
Sbjct:   44 VLVATTHLFWDPYRPEVKAAQAELVAEATTRFLIECD-----------------------------------RPAAVVITGDFNSVPHLQPEFI------------GID---VSEEEMRENSL-----------SAVYQLYSQGICPARHPEHPDRFKPKAL 144          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig87713.16303.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FIG3_ECTSI3.990e-9641.84Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A7S4DBB1_HETAK4.190e-1526.36Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6U5YHS5_GUITH2.550e-926.46Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A835WGX7_9CHLO4.100e-726.53Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A7S4C664_CHRCT4.060e-625.31Hypothetical protein (Fragment) n=1 Tax=Chrysotila... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12121CARBON CATABOLITE REPRESSOR PROTEIN 4coord: 8..436
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 76..437

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig87713contigH-elongata_contig87713:390..2356 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig87713.16303.1mRNA_H-elongata_contig87713.16303.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig87713 390..2356 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig87713.16303.1 ID=prot_H-elongata_contig87713.16303.1|Name=mRNA_H-elongata_contig87713.16303.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=442bp
RRLRLNYDGCLGVAVFYSTRRFEKTAEMRVFFPEHAWRLRADSGQFGDGN
IGSDEGSRLGDASTTSRLEEDLSSKHDTAVMVRLKLKKEWEGAGEVGRGG
KRNLGVETRPGNADPSPSITLVNCHLWYHPARPDLKTAQCKLLFDAIRRF
HRKCGVIAGSDNAGRSPGEKEDSLDGTSESRGEVGLGRHLAPANLILCGD
FNSVPFVNPEFLPGSLKPQAEATAGLEDRATPEGFLTDGGIYPTYPSTDR
TASGVYSLLAYGHVSASHPEHPDAFIPELVGIEKTRGYFTTSRAERIRWM
SLGVTPSPHRPTGAWCSGFGSALEDVYRDRGVSAPRFTTKTSDFRGIIDH
IFVSSGEKSSGLMVTGVLGFPEGADLSPEYVSDALSTSASAEQPGGDGSE
FSQAPTAKNMPPRGFGPIPDDIWGSDHLALGVEVSLLSTRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf