mRNA_H-elongata_contig8766.16298.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig8766.16298.1 vs. uniprot
Match: D7FIN1_ECTSI (Kinesin-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIN1_ECTSI) HSP 1 Score: 318 bits (816), Expect = 7.650e-100 Identity = 212/376 (56.38%), Postives = 240/376 (63.83%), Query Frame = 1
Query: 250 LATVRDQGIVVLIRIRPKSSREQAQRCCLQVQGPTQLHVPASKKTPTKKTYRFDAVLPETTSQEEVYQVAGPKLLQNALQGFNASMIAYGQTGSGKTFTMEGTAQDSGVIPRLCRGLFEEIAALGRGKHTTVLASYIE-------------------------------------------------IYQESIRDLL-DP----NGAQTAPGKGLSPQ--KSSRSRSPSVSPPAGTARSGN---FSESIGKFRPASPMNIRENKARLNRMDGVYVENITTHRVASEVAVLALLERGSSSRTKGETLMNAASSRSHAVLTLSITQSVADDGATEGG--------GGNGGTIRSKISLVDLAGSERAKSTGAAGQRLK 1176
+A+VRDQGIVVL+RIRP S EQ QRCCLQVQGPTQLHVPASK T ++KT FDAVLP TT+QEEVY+VAGPKL+QN LQGFNA+MIAYGQTGSGKTFTMEG+ Q+ GVIPRLC+GLFE I+ALG K TV+ASY+E IY E++ DLL DP N A + K SP+ + S S SP+VSPPA FSE GK +P IRENK DGVYVEN+T +V SE AVL LL RGS+ R+KGET MNAASSRSHAVLTLSI QSV +D + GTIRSKISLVDLAGSERAKSTGAAGQRLK
Sbjct: 93 VASVRDQGIVVLVRIRPVSRSEQGQRCCLQVQGPTQLHVPASKTTASEKTCTFDAVLPHTTTQEEVYRVAGPKLIQNLLQGFNATMIAYGQTGSGKTFTMEGSDQEPGVIPRLCKGLFEAISALGTEKDVTVVASYVERPTHPTPLSLGQRFINYRGLYAKHKHGCGGGGDVFHRGVTFDDDDDVTKIYNENVVDLLTDPSARINSADSPVKKKTSPRARQGSNSVSPTVSPPAXXXXXXXXXVFSE--GKGKPT----IRENK------DGVYVENVTEEKVQSEAAVLGLLARGSTVRSKGETQMNAASSRSHAVLTLSIIQSVLNDXXXXXXXXXXXXXXAADLGTIRSKISLVDLAGSERAKSTGAAGQRLK 456
BLAST of mRNA_H-elongata_contig8766.16298.1 vs. uniprot
Match: A0A4Y2AN47_ARAVE (Kinesin-like protein KIF13A n=5 Tax=Entelegynae TaxID=74971 RepID=A0A4Y2AN47_ARAVE) HSP 1 Score: 163 bits (412), Expect = 2.670e-40 Identity = 119/311 (38.26%), Postives = 161/311 (51.77%), Query Frame = 1
Query: 274 IVVLIRIRPKSSRE--QAQRCCLQV-QGPTQLHVPASKKTPTKKTYRFDAVL-------PETTSQEEVYQVAGPKLLQNALQGFNASMIAYGQTGSGKTFTMEGTAQDSGVIPRLCRGLFEEIAALGRGKHTTVLASYIEIYQESIRDLLDPNGAQTAPGKGLSPQKSSRSRSPSVSPPAGTARSGNFSESIGKFRPASPMNIRENKARLNRMDGVYVENITTHRVASEVAVLALLERGSSSRTKGETLMNAASSRSHAVLTLSITQSVADDGATEGGGGNGGTIRSKISLVDLAGSERAKSTGAAGQRLK 1176
I V IR+RP + RE A +C ++V Q T LH P S+ + K++ FD SQ V+ G +L NA QG+NA ++AYGQTGSGK+FTM G+ + G+IPRLC LFE I A GR V SY+EIY E + DLLDP G + + +RE + + G YV+ ++T V+S + L+ G+ SRT T MN+ SSRSHAV T+++T +V+D+ + G G SK+SLVDLAGSERA TGA G+RLK
Sbjct: 6 IKVAIRVRPFNRREIELATKCVVEVDQQQTILHNPNSRNSKQPKSFTFDQCFWSFNENHSHYASQATVFNSLGADILDNAFQGYNACILAYGQTGSGKSFTMMGSEDNKGLIPRLCDALFERINASGRQSDYKVEVSYMEIYNEKVHDLLDPKGCKQT------------------------------------------LKVRE-----HNILGPYVDGLSTLAVSSYEEINNLMTEGNKSRTVAATNMNSESSRSHAVFTITLTCTVSDERS-----GVTGEKVSKMSLVDLAGSERAIKTGAVGERLK 264
BLAST of mRNA_H-elongata_contig8766.16298.1 vs. uniprot
Match: A0A835Z0B7_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0B7_9STRA) HSP 1 Score: 159 bits (402), Expect = 4.100e-40 Identity = 115/309 (37.22%), Postives = 158/309 (51.13%), Query Frame = 1
Query: 259 VRDQGIVVLIRIRPKSSREQAQ--RCCLQVQGPTQLHVPASKKTPTKKTYRFDAVLPETTSQEEVYQVAGPKLLQNALQGFNASMIAYGQTGSGKTFTM------------------------------------------------EGTAQDSGVIPRLCRGLFEEIAALG-RGKHTTVLASYIEIYQESIRDLLDPNGAQTAPGKGLSPQKSSRSRSPSVSPPAGTARSGNFSESIGKFRPASPMNIRENKARLNRMDGVYVENITTHRVASEVAVLALLERGSSSRTKGETLMNAASSRSHAVLTL 1032
V+++G+VVL+R+RP + +E+ + + L +Q TQL +P +K P ++T+ +DAVL E TSQEEVY++ GP++L A+QG++A++ AYGQTGSGKT+TM EG GVIPRL LF+E AA+ +G V ASYIEIYQE +RDLL + A+ S S S AG G +PA IRE+K +GVY+EN+ V+S + + G+ R GET MNA SSRSHAVLTL
Sbjct: 44 VKEEGVVVLVRVRPSNDKEKTEGGKPVLDLQSSTQLRIPENKANPQERTFAYDAVLAEGTSQEEVYKLCGPRILDKAMQGYHATLFAYGQTGSGKTWTMHAADSCAAPATAPLPDHSRRAAASLNGWSVAAYAAPPALRAPRTYASAEGAPGSEGVIPRLSADLFQEAAAMSAKGVVVRVTASYIEIYQEVLRDLLVDDKAED---------------SLSASATAG-----------GAAKPA----IREHKT-----EGVYLENVAERPVSSAQELDRVFREGAKRRATGETAMNAGSSRSHAVLTL 317
BLAST of mRNA_H-elongata_contig8766.16298.1 vs. uniprot
Match: UPI000A2C0355 (kinesin-like protein KIF13A isoform X3 n=3 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=UPI000A2C0355) HSP 1 Score: 162 bits (410), Expect = 4.890e-40 Identity = 119/311 (38.26%), Postives = 159/311 (51.13%), Query Frame = 1
Query: 274 IVVLIRIRPKSSRE--QAQRCCLQV-QGPTQLHVPASKKTPTKKTYRFDAVL-------PETTSQEEVYQVAGPKLLQNALQGFNASMIAYGQTGSGKTFTMEGTAQDSGVIPRLCRGLFEEIAALGRGKHTTVLASYIEIYQESIRDLLDPNGAQTAPGKGLSPQKSSRSRSPSVSPPAGTARSGNFSESIGKFRPASPMNIRENKARLNRMDGVYVENITTHRVASEVAVLALLERGSSSRTKGETLMNAASSRSHAVLTLSITQSVADDGATEGGGGNGGTIRSKISLVDLAGSERAKSTGAAGQRLK 1176
I V IR+RP + RE A +C ++V Q T LH P S+ K++ FD QE V+ G +L NA QG+NA + AYGQTGSGK+FTM G+ + G+IPRLC LFE I A GR V SY+EIY E + DLLDP G + + +RE + + G YV+ ++T V+S + L+ G+ SRT T MN+ SSRSHAV T+++T +V+D+ + G G SK+SLVDLAGSERA TGA G+RLK
Sbjct: 6 IKVAIRVRPFNRREIELATKCVVEVDQQQTILHNPHSRNGKQPKSFTFDHCFWSFCESNSNYAGQEVVFNSLGADILDNAFQGYNACIFAYGQTGSGKSFTMMGSEDNKGLIPRLCDALFERITATGRQSDYKVEVSYMEIYNEKVHDLLDPKGCKQT------------------------------------------LKVRE-----HNILGPYVDGLSTLAVSSYEEINNLMAEGNKSRTVAATNMNSESSRSHAVFTITLTCTVSDEYS-----GVTGEKVSKMSLVDLAGSERAVKTGAVGERLK 264
BLAST of mRNA_H-elongata_contig8766.16298.1 vs. uniprot
Match: UPI001CFC0FCB (kinesin-like protein KIF13A n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFC0FCB) HSP 1 Score: 155 bits (393), Expect = 5.020e-40 Identity = 117/321 (36.45%), Postives = 165/321 (51.40%), Query Frame = 1
Query: 265 DQGIVVLIRIRPKSSREQA--QRCCLQVQ-GPTQLHVPASKKTPTK-----KTYRFDAV---LPETTS-----QEEVYQVAGPKLLQNALQGFNASMIAYGQTGSGKTFTMEGTAQDSGVIPRLCRGLFEEIAALGRGKHT-TVLASYIEIYQESIRDLLDPNGAQTAPGKGLSPQKSSRSRSPSVSPPAGTARSGNFSESIGKFRPASPMNIRENKARLNRMDGVYVENITTHRVASEVAVLALLERGSSSRTKGETLMNAASSRSHAVLTLSITQSVADDGATEGGGGNGGTIRSKISLVDLAGSERAKSTGAAGQRLK 1176
D + V +R+RP + RE +C ++++ T LH P S T + K + FD + ET + QE V++ G +L+NA QG+NA + AYGQTGSGK+F+M G A+ G+IPRLC LF+ ++ HT V SY+EIY E +RDLLDP G++ + + +RE+K + G YV+ ++ V S + +L+ G+ SRT T MN SSRSHAV ++ ITQ++ D GN G SK+SLVDLAGSER TGAAG+RLK
Sbjct: 3 DSKVKVAVRVRPMNKREIELNTKCVVEMEDNQTVLHPPPSSNTKGESRKPPKVFAFDYCFWSMDETNTTKYAGQEIVFKCLGDGILENAFQGYNACIFAYGQTGSGKSFSMMGNAEQPGLIPRLCCALFQRVSKEQTEAHTFKVEVSYMEIYNEKVRDLLDPKGSRQS------------------------------------------LKVREHK-----VFGPYVDGLSQLAVTSFEDIESLMSEGNKSRTVAATNMNEESSRSHAVFSIIITQTLIDLQT-----GNSGEKVSKVSLVDLAGSERVSKTGAAGERLK 271
BLAST of mRNA_H-elongata_contig8766.16298.1 vs. uniprot
Match: UPI000BBD67E1 (LOW QUALITY PROTEIN: kinesin-like protein KIF13A n=1 Tax=Astyanax mexicanus TaxID=7994 RepID=UPI000BBD67E1) HSP 1 Score: 159 bits (401), Expect = 7.610e-39 Identity = 116/320 (36.25%), Postives = 161/320 (50.31%), Query Frame = 1
Query: 265 DQGIVVLIRIRPKSSRE--QAQRCCLQVQ-GPTQLHVPASK----KTPTKKTYRFD--------AVLPETTSQEEVYQVAGPKLLQNALQGFNASMIAYGQTGSGKTFTMEGTAQDSGVIPRLCRGLFEEIAALGRGKHT-TVLASYIEIYQESIRDLLDPNGAQTAPGKGLSPQKSSRSRSPSVSPPAGTARSGNFSESIGKFRPASPMNIRENKARLNRMDGVYVENITTHRVASEVAVLALLERGSSSRTKGETLMNAASSRSHAVLTLSITQSVADDGATEGGGGNGGTIRSKISLVDLAGSERAKSTGAAGQRLK 1176
D + V +R+RP + RE + +C L+++ T LH P S K + FD + +P+ QE V++ G +LQNA QG+NA + AYGQTGSGK+++M G+ G+IPRLC LFE + G H+ V SY+EIY E +RDLLDP G N + K R +++ G YV+ ++ V S + +L+ G+ SRT T MN SSRSHAV ++ ITQ++ D + GN G SK+SLVDLAGSER TGAAG+RLK
Sbjct: 3 DTKVKVAVRVRPMNRREIELSTKCVLEMEENQTILHPPPSNAKGDSRKQSKVFAFDHCFWSMDESNVPKYAGQEVVFKCLGEGILQNAFQGYNACIFAYGQTGSGKSYSMMGSVDQPGLIPRLCCSLFERVGREGNETHSFKVEVSYMEIYNEKVRDLLDPKG-----------------------------------------------NRQSLKVREHKVLGPYVDGLSQLAVTSFEDIESLMSEGNKSRTVAATNMNEESSRSHAVFSIIITQTLYDPQS-----GNSGEKVSKVSLVDLAGSERVSKTGAAGERLK 270
BLAST of mRNA_H-elongata_contig8766.16298.1 vs. uniprot
Match: UPI0008142777 (kinesin-like protein KIF13B isoform X5 n=1 Tax=Pygocentrus nattereri TaxID=42514 RepID=UPI0008142777) HSP 1 Score: 158 bits (400), Expect = 9.740e-39 Identity = 117/323 (36.22%), Postives = 162/323 (50.15%), Query Frame = 1
Query: 259 VRDQGIVVLIRIRPKSSREQ--AQRCCLQVQGPTQLHVPA--------SKKTPTKKTYRF------DAVLPETTSQEEVYQVAGPKLLQNALQGFNASMIAYGQTGSGKTFTMEGTAQDSGVIPRLCRGLFEEIAA-LGRGKHTTVLASYIEIYQESIRDLLDPNGAQTAPGKGLSPQKSSRSRSPSVSPPAGTARSGNFSESIGKFRPASPMNIRENKARLNRMDGVYVENITTHRVASEVAVLALLERGSSSRTKGETLMNAASSRSHAVLTLSITQSVADDGATEGGGGNGGTIRSKISLVDLAGSERAKSTGAAGQRLK 1176
V D + V +R+RP + RE+ +C ++++G + +PA S+ P Y + +A + QE V+Q G LL NA QG+NA + AYGQTGSGK++TM G+A+ G+IPRLC LF+ A L G+ TV S++EIY E +RDLLDP G+ A + +RE+K G YV+ ++ V S + +L+ G+ SRT T MN SSRSHAV L +T ++ D + G G SK+SLVDLAGSERA TGAAG RLK
Sbjct: 6 VSDSNVKVAVRVRPMNRREKDLKTKCVVEMEGNQTVLLPAGSNLGKGDSRNQPKVFAYDYCFWSMDEANTAKFAGQEVVFQCLGESLLDNAFQGYNACIFAYGQTGSGKSYTMMGSAEQPGLIPRLCSSLFQRTAQELREGESFTVEVSFMEIYNEKVRDLLDPKGSSQA------------------------------------------LRVREHKVL-----GPYVDGLSRLAVTSYKDIESLMSEGNKSRTVAATNMNEESSRSHAVFNLILTHTLRDLQS-----GTSGEKVSKLSLVDLAGSERATKTGAAGDRLK 276
BLAST of mRNA_H-elongata_contig8766.16298.1 vs. uniprot
Match: A0A3B4BZT6_PYGNA (Kinesin family member 13B n=7 Tax=Serrasalmidae TaxID=42495 RepID=A0A3B4BZT6_PYGNA) HSP 1 Score: 158 bits (400), Expect = 1.030e-38 Identity = 117/323 (36.22%), Postives = 162/323 (50.15%), Query Frame = 1
Query: 259 VRDQGIVVLIRIRPKSSREQ--AQRCCLQVQGPTQLHVPA--------SKKTPTKKTYRF------DAVLPETTSQEEVYQVAGPKLLQNALQGFNASMIAYGQTGSGKTFTMEGTAQDSGVIPRLCRGLFEEIAA-LGRGKHTTVLASYIEIYQESIRDLLDPNGAQTAPGKGLSPQKSSRSRSPSVSPPAGTARSGNFSESIGKFRPASPMNIRENKARLNRMDGVYVENITTHRVASEVAVLALLERGSSSRTKGETLMNAASSRSHAVLTLSITQSVADDGATEGGGGNGGTIRSKISLVDLAGSERAKSTGAAGQRLK 1176
V D + V +R+RP + RE+ +C ++++G + +PA S+ P Y + +A + QE V+Q G LL NA QG+NA + AYGQTGSGK++TM G+A+ G+IPRLC LF+ A L G+ TV S++EIY E +RDLLDP G+ A + +RE+K G YV+ ++ V S + +L+ G+ SRT T MN SSRSHAV L +T ++ D + G G SK+SLVDLAGSERA TGAAG RLK
Sbjct: 6 VSDSNVKVAVRVRPMNRREKDLKTKCVVEMEGNQTVLLPAGSNLGKGDSRNQPKVFAYDYCFWSMDEANTAKFAGQEVVFQCLGESLLDNAFQGYNACIFAYGQTGSGKSYTMMGSAEQPGLIPRLCSSLFQRTAQELREGESFTVEVSFMEIYNEKVRDLLDPKGSSQA------------------------------------------LRVREHKVL-----GPYVDGLSRLAVTSYKDIESLMSEGNKSRTVAATNMNEESSRSHAVFNLILTHTLRDLQS-----GTSGEKVSKLSLVDLAGSERATKTGAAGDRLK 276
BLAST of mRNA_H-elongata_contig8766.16298.1 vs. uniprot
Match: A0A0S7JC55_9TELE (Kinesin-like protein (Fragment) n=3 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7JC55_9TELE) HSP 1 Score: 151 bits (381), Expect = 1.100e-38 Identity = 113/321 (35.20%), Postives = 160/321 (49.84%), Query Frame = 1
Query: 265 DQGIVVLIRIRPKSSREQ--AQRCCLQVQGPTQLHVPA----SKKTPTK--KTYRFDAVL--------PETTSQEEVYQVAGPKLLQNALQGFNASMIAYGQTGSGKTFTMEGTAQDSGVIPRLCRGLFEEIAALGR-GKHTTVLASYIEIYQESIRDLLDPNGAQTAPGKGLSPQKSSRSRSPSVSPPAGTARSGNFSESIGKFRPASPMNIRENKARLNRMDGVYVENITTHRVASEVAVLALLERGSSSRTKGETLMNAASSRSHAVLTLSITQSVADDGATEGGGGNGGTIRSKISLVDLAGSERAKSTGAAGQRLK 1176
D + V +R+RP + RE+ RC ++++G + PA +K P K + +D + Q+ V+Q G LL NA G+NA + AYGQTGSGK++TM G+A+ G+IPRLC LF R G+ TV SY+EIY E +RDLLDP G++ A + +RE + + G YV+ ++ VA+ + +L+ G+ SRT T MN SSRSHAV + +T ++ D + G G SK+SLVDLAGSERA TGAAG+RLK
Sbjct: 8 DSNVKVAVRVRPMNRREKDLKTRCVVEMEGSQTILHPAITNVNKGDPRNQPKAFAYDYCFWSMDESQQDKFAGQDVVFQCLGESLLDNAFMGYNACIFAYGQTGSGKSYTMMGSAEQPGLIPRLCSSLFSRTMQEAREGETFTVEVSYMEIYNEKVRDLLDPKGSRQA------------------------------------------LRVRE-----HNVFGPYVDGLSRLAVANYKDIESLMSEGNKSRTVAATNMNEESSRSHAVFNIILTHTLMDLQS-----GTSGEKVSKLSLVDLAGSERAAKTGAAGERLK 276
BLAST of mRNA_H-elongata_contig8766.16298.1 vs. uniprot
Match: A0A3B1J514_ASTMX (Kinesin family member 13A n=1 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A3B1J514_ASTMX) HSP 1 Score: 157 bits (398), Expect = 1.840e-38 Identity = 115/316 (36.39%), Postives = 160/316 (50.63%), Query Frame = 1
Query: 265 DQGIVVLIRIRPKSSRE--QAQRCCLQVQ-GPTQLHVPASKKTPTKKTYRFD--------AVLPETTSQEEVYQVAGPKLLQNALQGFNASMIAYGQTGSGKTFTMEGTAQDSGVIPRLCRGLFEEIAALGRGKHT-TVLASYIEIYQESIRDLLDPNGAQTAPGKGLSPQKSSRSRSPSVSPPAGTARSGNFSESIGKFRPASPMNIRENKARLNRMDGVYVENITTHRVASEVAVLALLERGSSSRTKGETLMNAASSRSHAVLTLSITQSVADDGATEGGGGNGGTIRSKISLVDLAGSERAKSTGAAGQRLK 1176
D + V +R+RP + RE + +C L+++ T LH P S + FD + +P+ QE V++ G +LQNA QG+NA + AYGQTGSGK+++M G+ G+IPRLC LFE + G H+ V SY+EIY E +RDLLDP G N + K R +++ G YV+ ++ V S + +L+ G+ SRT T MN SSRSHAV ++ ITQ++ D + GN G SK+SLVDLAGSER TGAAG+RLK
Sbjct: 3 DTKVKVAVRVRPMNRREIELSTKCVLEMEENQTILHPPPSN------VFAFDHCFWSMDESNVPKYAGQEVVFKCLGEGILQNAFQGYNACIFAYGQTGSGKSYSMMGSVDQPGLIPRLCCSLFERVGREGNETHSFKVEVSYMEIYNEKVRDLLDPKG-----------------------------------------------NRQSLKVREHKVLGPYVDGLSQLAVTSFEDIESLMSEGNKSRTVAATNMNEESSRSHAVFSIIITQTLYDPQS-----GNSGEKVSKVSLVDLAGSERVSKTGAAGERLK 260 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8766.16298.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig8766.16298.1 >prot_H-elongata_contig8766.16298.1 ID=prot_H-elongata_contig8766.16298.1|Name=mRNA_H-elongata_contig8766.16298.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=392bp HTGRHSIWRLDWVGGDDQHLFSFAVTVMGLNCSKNALADTANVFHLCSGRback to top mRNA from alignment at H-elongata_contig8766:535..5415- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig8766.16298.1 ID=mRNA_H-elongata_contig8766.16298.1|Name=mRNA_H-elongata_contig8766.16298.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4881bp|location=Sequence derived from alignment at H-elongata_contig8766:535..5415- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig8766:535..5415- >mRNA_H-elongata_contig8766.16298.1 ID=mRNA_H-elongata_contig8766.16298.1|Name=mRNA_H-elongata_contig8766.16298.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2352bp|location=Sequence derived from alignment at H-elongata_contig8766:535..5415- (Himanthalia elongata Himel1 dioecious)back to top |