prot_H-elongata_contig87593.16291.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig87593.16291.1
Unique Name	prot_H-elongata_contig87593.16291.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	146

Homology

[Close]

BLAST of mRNA_H-elongata_contig87593.16291.1 vs. uniprot
Match: D7G717_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G717_ECTSI)

HSP 1 Score: 197 bits (500), Expect = 5.500e-59
Identity = 107/142 (75.35%), Postives = 120/142 (84.51%), Query Frame = 0

Query:    1 MLDIYYGIIATVAAAAAIRCYLKFVRGPEPKSV------VIITGSNTGVGFETAKSLVQMGAHVIMACRSEEKAKGAMERITSELEAVAGAIRNNTAPAVRGQMTFMVLDLSSLESVRAFVAEFKSSKLGLDSLILNAGVMH 136
            ML+I YGIIATVAAAA  RCYLKFVRG EP+SV      VIITGSNTGVG+ETAK+LV MGAHVIMACRSEEKA+ A+E IT ELEA A AIR+NT   ++G++TFM LDLSSL +VR FVAEFK+SKLGLDSLILNAGVMH
Sbjct:   68 MLEINYGIIATVAAAAVARCYLKFVRGVEPRSVNMSGKVVIITGSNTGVGYETAKALVNMGAHVIMACRSEEKARKAIEDITFELEAAAKAIRHNTDTGIKGKLTFMKLDLSSLAAVRVFVAEFKASKLGLDSLILNAGVMH 209

[Close]

BLAST of mRNA_H-elongata_contig87593.16291.1 vs. uniprot
Match: A0A835YQM3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQM3_9STRA)

HSP 1 Score: 113 bits (282), Expect = 7.250e-27
Identity = 65/130 (50.00%), Postives = 84/130 (64.62%), Query Frame = 0

Query:   13 AAAAAIRCYLKFVRGPEPK------SVVIITGSNTGVGFETAKSLVQMGAHVIMACRSEEKAKGAMERITSELEAVAGAIR-NNTAPAVRGQMTFMVLDLSSLESVRAFVAEFKSSKLGLDSLILNAGVM 135
            A  + I  Y   + G  P+       VV++TG+N G+G ETAK+L+ MGAHVI+ACRSEE+AK A+E +T  L  VA   R     P +RG+ TFM LDL SL+SVR F  E++  KL LD L+LNAGVM
Sbjct:   88 AMLSGIMTYRTHIMGRAPEHVDMQGKVVVVTGANAGIGLETAKALMGMGAHVILACRSEERAKEAIETMTRGLLNVAALERPRGGVPTLRGKATFMPLDLCSLKSVRNFATEYRKRKLPLDVLVLNAGVM 217

[Close]

BLAST of mRNA_H-elongata_contig87593.16291.1 vs. uniprot
Match: A0A6H5J7F6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7F6_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 2.900e-25
Identity = 57/82 (69.51%), Postives = 67/82 (81.71%), Query Frame = 0

Query:   55 GAHVIMACRSEEKAKGAMERITSELEAVAGAIRNNTAPAVRGQMTFMVLDLSSLESVRAFVAEFKSSKLGLDSLILNAGVMH 136
            G   + ACRSEEKA+ A+E IT ELEA A AIR+NT   ++G++TFM LDLSSL +VR FVAEFK+SKLGLDSLILNAGVMH
Sbjct:  100 GHRTVGACRSEEKARKAIENITFELEAAAKAIRHNTDTGIKGKLTFMKLDLSSLAAVRVFVAEFKASKLGLDSLILNAGVMH 181

[Close]

BLAST of mRNA_H-elongata_contig87593.16291.1 vs. uniprot
Match: A0A6J8CBX1_MYTCO (Uncharacterized protein n=2 Tax=Mytilus TaxID=6548 RepID=A0A6J8CBX1_MYTCO)

HSP 1 Score: 96.7 bits (239), Expect = 3.880e-21
Identity = 53/120 (44.17%), Postives = 74/120 (61.67%), Query Frame = 0

Query:   22 LKFVRGPEPKSVVIITGSNTGVGFETAKSLVQMGAHVIMACRSEEKAKGAMERITSELEAVAGAIRNNTAPAVRGQMTFMVLDLSSLESVRAFVAEFKSSKLGLDSLILNAGVMHSVSVT 141
            +  V  P  K +VI+TG+N+GVG+ETAK +  MGAHV++ACRSEEKA+ AM R+  E +       +N        + FM LDL+SL+S +AF+  FK+    L+ LI NAG+     VT
Sbjct:    7 IPMVSQPRDK-IVIVTGANSGVGYETAKFIAMMGAHVVLACRSEEKARDAMRRMNEEFQTEKQLRADNVITDDELDIEFMKLDLASLKSTKAFIDNFKAKHKKLNLLICNAGIYSPHQVT 125

[Close]

BLAST of mRNA_H-elongata_contig87593.16291.1 vs. uniprot
Match: A0A7S2PRA5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PRA5_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 9.330e-21
Identity = 66/154 (42.86%), Postives = 91/154 (59.09%), Query Frame = 0

Query:    1 MLDIYYGIIATV--AAAAAIR-CYLKFVRGPEPK--------SVVIITGSNTGVGFETAKSLVQMGAHVIMACRSEEKAKGAMERITSEL---EAVAGAIRNNTAPAVRGQ-----MTFMVLDLSSLESVRAFVAEFKSSKLGLDSLILNAGVM 135
            ML + Y +IA +   + A++R  YL ++ GP+PK         VV+ITGSN G+G ETA+ L+  GA VI ACR+ EKAK A++ I  ++   E  +    N T   VR +     M F+ LDLS LESVR+ V +F+S  + L  LI NAGVM
Sbjct:    7 MLPMSYAVIAIIDIISIASLRYLYLVYIEGPKPKLSRNAMAGRVVLITGSNAGIGLETARQLLYAGATVIFACRNAEKAKEAIDGIYDDINSGEDGSNGSENGTQHLVRPKPLRERMLFLKLDLSDLESVRSAVCKFESMNMKLHILINNAGVM 160

[Close]

BLAST of mRNA_H-elongata_contig87593.16291.1 vs. uniprot
Match: K1PV89_CRAGI (WW domain-containing oxidoreductase n=4 Tax=Crassostrea gigas TaxID=29159 RepID=K1PV89_CRAGI)

HSP 1 Score: 93.6 bits (231), Expect = 2.000e-20
Identity = 51/110 (46.36%), Postives = 68/110 (61.82%), Query Frame = 0

Query:   33 VVIITGSNTGVGFETAKSLVQMGAHVIMACRSEEKAKGAMERITSELEAVAGAIRNNTAPAVRGQMTFMVLDLSSLESVRAFVAEFKSSKLGLDSLILNAGV-MHSVSVT 141
            VV++TG NTG+G+ET+K +  MGA VI+ACRSEE+AK A+E++  E E              R  + FM LDL+SL SV  F+  FKS K  L  L+ NAG+ MH +  T
Sbjct:   17 VVLVTGGNTGIGYETSKWIAMMGARVIIACRSEERAKNAIEKMQKEFEEEKAKGTAGICSKERLDVEFMALDLASLSSVENFIETFKSKKTKLHLLLCNAGIAMHPLEYT 126

[Close]

BLAST of mRNA_H-elongata_contig87593.16291.1 vs. uniprot
Match: UPI00148ABD07 (WW domain-containing oxidoreductase n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148ABD07)

HSP 1 Score: 94.0 bits (232), Expect = 3.520e-20
Identity = 56/122 (45.90%), Postives = 81/122 (66.39%), Query Frame = 0

Query:   24 FVRGP-EPKSVVIITGSNTGVGFETAKSLVQMGAHVIMACRSEEKAKGAMERITSELEAVAGAIRNNTAPAVRGQMT--FMVLDLSSLESVRAFVAEFKSSKLGLDSLILNAGV-MHSVSVT 141
            F R P  P+ VVI+TG NTG+G+ETAK +  MGAHVI+ACR++E+A  A+ R+ ++ E      +  T+    G+++  FM LDLSSL+S + F+ EFK+S   L  LI NAG+ MH ++ T
Sbjct:    7 FPREPLSPEKVVIVTGGNTGIGYETAKWIAMMGAHVIIACRTKERALHAITRMEADFEQEK---QKGTSGLTSGELSVEFMELDLSSLKSTQKFIEEFKASGKPLHVLICNAGLGMHPLTYT 125

[Close]

BLAST of mRNA_H-elongata_contig87593.16291.1 vs. uniprot
Match: A0A7S4S5X8_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4S5X8_9DINO)

HSP 1 Score: 94.0 bits (232), Expect = 1.200e-19
Identity = 63/134 (47.01%), Postives = 78/134 (58.21%), Query Frame = 0

Query:   11 TVAAAAAIRCYLKFVRGP--EPKS------VVIITGSNTGVGFETAKSLVQMGAHVIMACRSEEKAKGAMERITSELEAVAGAIRNNTAPAVR-GQMTFMVLDLSSLESVRAFVAEFKSSKLGLDSLILNAGVM 135
            T  AA A   Y   VR P   PK+      V ++TG NTG+GFETA +L + GA V+ ACR+E KA+ AM+ +          I   T PAVR  Q+ F+ LD+SSL SVR F A F+ S L L  LILNAGVM
Sbjct:  147 TADAALASAAYRYMVRWPVCRPKAGSLQGKVCVVTGCNTGIGFETAGALARAGAVVVFACRNEAKARSAMKAL----------IACTTGPAVREDQLRFIQLDVSSLRSVRQFAAAFRESGLRLHLLILNAGVM 270

[Close]

BLAST of mRNA_H-elongata_contig87593.16291.1 vs. uniprot
Match: A0A433QHX7_9FUNG (Uncharacterized protein n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433QHX7_9FUNG)

HSP 1 Score: 92.8 bits (229), Expect = 2.100e-19
Identity = 54/108 (50.00%), Postives = 70/108 (64.81%), Query Frame = 0

Query:   30 PKSVVIITGSNTGVGFETAKSLVQMGAHVIMACRSEEKAKGAMERITSELEAVAGAIRNNTAPAVRGQMTFMVLDLSSLESVRAFVAEFKSSKL--GLDSLILNAGVM 135
            PK   I+TG NTG+G+ETAKSLV  G  V++ACRSEE+A+GA+ER+  EL    G   N     +   + F+ LDL+SL SVRAFV  F+   L  GL  L+ NAG+M
Sbjct:   75 PKPWAIVTGGNTGIGYETAKSLVAAGFRVVLACRSEERARGAIERMRGELATRYGQ-DNELVTELDATVHFLPLDLASLPSVRAFVPLFERISLEDGLHVLVNNAGIM 181

[Close]

BLAST of mRNA_H-elongata_contig87593.16291.1 vs. uniprot
Match: UPI000B45848A (retinol dehydrogenase 14-like n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=UPI000B45848A)

HSP 1 Score: 91.7 bits (226), Expect = 2.630e-19
Identity = 51/110 (46.36%), Postives = 70/110 (63.64%), Query Frame = 0

Query:   33 VVIITGSNTGVGFETAKSLVQMGAHVIMACRSEEKAKGAMERITSELEAVAGAIRNNTAPAVRGQMTFMVLDLSSLESVRAFVAEFKSSKLGLDSLILNAGV-MHSVSVT 141
            VVI+TG+NTG+G+ETAK +  MGA VI+ACRSEE+A+ AM R+ +E EA                + FM LD +SL+SV  F+ EFK+S   L  L+ NAG+ +H  + T
Sbjct:   17 VVIVTGANTGIGYETAKWIAMMGATVILACRSEERAREAMTRMNAEFEAEKDRKTEGVVDYPELSIEFMKLDCASLQSVMDFIKEFKNSGRQLHVLVCNAGIGLHKQAYT 126

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig87593.16291.1 vs. uniprot

BLAST of mRNA_H-elongata_contig87593.16291.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G717_ECTSI	5.500e-59	75.35	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A835YQM3_9STRA	7.250e-27	50.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A6H5J7F6_9PHAE	2.900e-25	69.51	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6J8CBX1_MYTCO	3.880e-21	44.17	Uncharacterized protein n=2 Tax=Mytilus TaxID=6548...	[more]
A0A7S2PRA5_9STRA	9.330e-21	42.86	Hypothetical protein (Fragment) n=1 Tax=Leptocylin...	[more]
K1PV89_CRAGI	2.000e-20	46.36	WW domain-containing oxidoreductase n=4 Tax=Crasso...	[more]
UPI00148ABD07	3.520e-20	45.90	WW domain-containing oxidoreductase n=1 Tax=Crasso...	[more]
A0A7S4S5X8_9DINO	1.200e-19	47.01	Hypothetical protein n=1 Tax=Alexandrium monilatum...	[more]
A0A433QHX7_9FUNG	2.100e-19	50.00	Uncharacterized protein n=2 Tax=Jimgerdemannia fla...	[more]
UPI000B45848A	2.630e-19	46.36	retinol dehydrogenase 14-like n=1 Tax=Mizuhopecten...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00081	GDHRDH	coord: 123..134 score: 44.25 coord: 33..50 score: 37.23
IPR002347	Short-chain dehydrogenase/reductase SDR	PFAM	PF00106	adh_short	coord: 33..138 e-value: 1.0E-12 score: 48.0
None	No IPR available	GENE3D	3.40.50.720		coord: 30..144 e-value: 9.9E-27 score: 95.6
None	No IPR available	PANTHER	PTHR24320:SF152		coord: 32..137
None	No IPR available	PANTHER	PTHR24320	FAMILY NOT NAMED	coord: 32..137
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 23..145
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..22
None	No IPR available	TMHMM	TMhelix		coord: 4..22
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 31..139

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig87593	contig	H-elongata_contig87593:271..2343 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig87593.16291.1	mRNA_H-elongata_contig87593.16291.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig87593 271..2346 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig87593.16291.1 ID=prot_H-elongata_contig87593.16291.1|Name=mRNA_H-elongata_contig87593.16291.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=146bp
MLDIYYGIIATVAAAAAIRCYLKFVRGPEPKSVVIITGSNTGVGFETAKS
LVQMGAHVIMACRSEEKAKGAMERITSELEAVAGAIRNNTAPAVRGQMTF
MVLDLSSLESVRAFVAEFKSSKLGLDSLILNAGVMHSVSVTRARA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002347	SDR_fam
IPR036291	NAD(P)-bd_dom_sf